| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718960
Identifier: 53718960
GI number: 53718960
Start: 1544714
End: 1545115
Strand: Reverse
Name: 53718960
Synonym: BPSL1322
Alternate gene names: NA
Gene position: 1545115-1544714 (Counterclockwise)
Preceding gene: 53718961
Following gene: 53718959
Centisome position: 37.92
GC content: 68.16
Gene sequence:
>402_bases GTGAACACCCGCAATCCAGCCGCAGAACGTCCATCCGCCGTACCCGCTCGCCGCGACGCGGGCGATGCGCCGCGCGCGCT CACGGTCACGCCGGCCGTCGACGTATACGAAGACAAGCACGGCGTGACGCTGTGGGCCGACCTGCCCGGCGTGTCGAAGG AGCGTCTCGAAGTGAAGATCCAGGACGGCCATCTGTCGATCGACGCGCACGCGGTGCTGCCGATGCCGGCGAGCCTGCGC GCGCAGCACGTCGAGGTGCGCGAGCCGCATTTCGCGCGCACGTTCCAGTTGAGCCCGGACTTCGACACGACGAAGATCGA GGCGAATCTTCAGGACGGCGTATTGAAGCTGACGATCCCGAGGCGCGACGAAGCGCGCCCGCGGCGCATCGACGTGCAGT GA
Upstream 100 bases:
>100_bases AACGGTTGCCTGCTGATCAGCGTCGGCAAGCGCGAAGCGTCGAAGCCGCGCGCGATCACCGTGCAATGAGCCCCGTCAGT CTCGAATCAAGGAGCCGATC
Downstream 100 bases:
>100_bases AAAACGGCGGCGGCGCGCGCCTTCATGCGCGCCGCTGCGTGAAGCACGACGGCGCGGCGGCGCACGCATCGGGCGTGCCG CGCGGCGCGCTCGCTTTTCG
Product: putative heat shock protein
Products: NA
Alternate protein names: HSP20 Family Protein; Heat Shock Protein; Small Heat Shock Protein; Hsp20 Family Heat-Shock Protein; Low Molecular Weight Heat Shock Protein; Small Heat Shock Protein Family Protein; Heat Shock Protein SP; HSP20 Family Molecular Chaperone; Molecular Chaperone; Small Heat-Shock; Heat Shock Family Protein; Heat Shock Chaperone; Hsp20/Alpha Crystallin Molecular Chaperone
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MNTRNPAAERPSAVPARRDAGDAPRALTVTPAVDVYEDKHGVTLWADLPGVSKERLEVKIQDGHLSIDAHAVLPMPASLR AQHVEVREPHFARTFQLSPDFDTTKIEANLQDGVLKLTIPRRDEARPRRIDVQ
Sequences:
>Translated_133_residues MNTRNPAAERPSAVPARRDAGDAPRALTVTPAVDVYEDKHGVTLWADLPGVSKERLEVKIQDGHLSIDAHAVLPMPASLR AQHVEVREPHFARTFQLSPDFDTTKIEANLQDGVLKLTIPRRDEARPRRIDVQ >Mature_133_residues MNTRNPAAERPSAVPARRDAGDAPRALTVTPAVDVYEDKHGVTLWADLPGVSKERLEVKIQDGHLSIDAHAVLPMPASLR AQHVEVREPHFARTFQLSPDFDTTKIEANLQDGVLKLTIPRRDEARPRRIDVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14814; Mature: 14814
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: PS01031 HSP20
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTRNPAAERPSAVPARRDAGDAPRALTVTPAVDVYEDKHGVTLWADLPGVSKERLEVKI CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCEEEEEECCCCCCCEEEEEE QDGHLSIDAHAVLPMPASLRAQHVEVREPHFARTFQLSPDFDTTKIEANLQDGVLKLTIP CCCEEEEECEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCEEEEEEC RRDEARPRRIDVQ CCCCCCCEEECCC >Mature Secondary Structure MNTRNPAAERPSAVPARRDAGDAPRALTVTPAVDVYEDKHGVTLWADLPGVSKERLEVKI CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCEEEEEECCCCCCCEEEEEE QDGHLSIDAHAVLPMPASLRAQHVEVREPHFARTFQLSPDFDTTKIEANLQDGVLKLTIP CCCEEEEECEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCEEEEEEC RRDEARPRRIDVQ CCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA