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The map label for this gene is ybaO [C]

Identifier: 53718949

GI number: 53718949

Start: 1530602

End: 1531096

Strand: Reverse

Name: ybaO [C]

Synonym: BPSL1311

Alternate gene names: 53718949

Gene position: 1531096-1530602 (Counterclockwise)

Preceding gene: 53718951

Following gene: 53718947

Centisome position: 37.58

GC content: 68.08

Gene sequence:

>495_bases
TTGGCCTACTCTCTCGACGAACTGGACCTTCGTATCCTCGCCGCGCTGCAGGCGGACGCGTCGCTGTCGAACCTGGCGCT
CGCCGAGCGCGCGCTCTCGTCGCCGCCTACCTGCATGCGGCGCGTGCGCAAGCTGACCGAGGCCGGCATCATCGAGCGCC
GGATCGCCGTCCTCGATCGCGGCAGGATCGGCACGAGCGTCACCGCGATCATCGAGGTCGGCCTCGATCGGCAAACCGCC
GAGGATTACGACGCGTTCGAGGCATACGCCTGCGCGCAGCCGGAAGTCACGCAGTGCTACCGCGTGTCGCCCGGGCCCGA
CTTCGTCATCGTCGCGGATCTCGCCGACATGGCCGCGTATGACGAATTCGCGCGCCGGCTGTTCACGCATGCATCGAACG
TCCGCAACGTGCGGACCTTCTTCTCGACGCATCGCGCGAAATTCGAAGCGAATGCGCCGGTGCGCGCCACGCCGGGCAAG
CGAGCGGGCGGCTGA

Upstream 100 bases:

>100_bases
AATGGAATTTAATTTCAAAAATATCGATTCTCTGAAATTTCCATATCATTTCATTTCGGCTTGAAATTAAATTTCAACCC
GCTCGCGCAAGGAGCAGCGC

Downstream 100 bases:

>100_bases
CGGCGTCGACCGAACGGAACCGTGCGCGCCGGCGGCGGCGCGCGCGCACGTGACGCGCCCGGCTTCCGCCGCGCGACATC
CGCGTCGTCCGCGCCGTCCG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MAYSLDELDLRILAALQADASLSNLALAERALSSPPTCMRRVRKLTEAGIIERRIAVLDRGRIGTSVTAIIEVGLDRQTA
EDYDAFEAYACAQPEVTQCYRVSPGPDFVIVADLADMAAYDEFARRLFTHASNVRNVRTFFSTHRAKFEANAPVRATPGK
RAGG

Sequences:

>Translated_164_residues
MAYSLDELDLRILAALQADASLSNLALAERALSSPPTCMRRVRKLTEAGIIERRIAVLDRGRIGTSVTAIIEVGLDRQTA
EDYDAFEAYACAQPEVTQCYRVSPGPDFVIVADLADMAAYDEFARRLFTHASNVRNVRTFFSTHRAKFEANAPVRATPGK
RAGG
>Mature_163_residues
AYSLDELDLRILAALQADASLSNLALAERALSSPPTCMRRVRKLTEAGIIERRIAVLDRGRIGTSVTAIIEVGLDRQTAE
DYDAFEAYACAQPEVTQCYRVSPGPDFVIVADLADMAAYDEFARRLFTHASNVRNVRTFFSTHRAKFEANAPVRATPGKR
AGG

Specific function: Unknown

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=31.3333333333333, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1787116, Length=143, Percent_Identity=28.6713286713287, Blast_Score=76, Evalue=9e-16,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17994; Mature: 17862

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYSLDELDLRILAALQADASLSNLALAERALSSPPTCMRRVRKLTEAGIIERRIAVLDR
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GRIGTSVTAIIEVGLDRQTAEDYDAFEAYACAQPEVTQCYRVSPGPDFVIVADLADMAAY
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHEEECCCCCCEEEEECHHHHHHH
DEFARRLFTHASNVRNVRTFFSTHRAKFEANAPVRATPGKRAGG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCC
>Mature Secondary Structure 
AYSLDELDLRILAALQADASLSNLALAERALSSPPTCMRRVRKLTEAGIIERRIAVLDR
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GRIGTSVTAIIEVGLDRQTAEDYDAFEAYACAQPEVTQCYRVSPGPDFVIVADLADMAAY
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHEEECCCCCCEEEEECHHHHHHH
DEFARRLFTHASNVRNVRTFFSTHRAKFEANAPVRATPGKRAGG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]