| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718943
Identifier: 53718943
GI number: 53718943
Start: 1522632
End: 1523786
Strand: Reverse
Name: 53718943
Synonym: BPSL1305
Alternate gene names: NA
Gene position: 1523786-1522632 (Counterclockwise)
Preceding gene: 53718944
Following gene: 53718942
Centisome position: 37.4
GC content: 69.09
Gene sequence:
>1155_bases ATGACATCTCCTGCCCAGCCGACGTGGCGCGACACGCTCTCGGCCTTCGCGTATCGCCATCTGCGCCTGCCGCCGCCGAA GCTGGAGACAGGCCGATTCGGCTGGGCCACGCGATGGTTCCTGGACTGGCTCGTGCCGACGGGCGCATCCGCGTGGGCGG CCTATCATCTGGCCGCCGCGTTCGTCGCGCATTACCGTTCCGTCCTGCCGGCGAACGTCGGGCCCGACGTGCCGCTCGGC GTCATGTCCGAGCTGATGTCGCTCGCCAATTCGAAACCCTTTGCCTACACCGGGATCTCGCTCGTCGCGGTACTCGTCGC GCTGATGTTTCATCGCTACCTGACGTGGCCGGCGCCCGGCCGATGGCTGAACCGCCGCAAGCGCCCCGTCATTCACGCGC TGCCGTTCATGCTCGGCTTCCTCGCGGGCAAGCTGCTCGCCTTCGCGGTGCCGGCGCTCGCCGTCGCGGTCGCGGCCTAT GCGTCGGAAGGAGCGATCGGTGCGATCGCGCCGCTCGCGGCGCCGATCGCGCTCCTCAGCGCCGCCTATTACTTTCTGCT GTACGACGAAGTGCGGCCGCCCGCGATCGTCAGCCTGTCGTTTCATCGTTCGCGCCAGCGCTCGGCCGGCGCGTGCGCAA TACACCAAGCGCGCGAACCGGACGGCGCGGCCGCCGTCGGCATCGGCGCATGGCGCGACGCGCACGACGAACTGCGCGAC GACGTATTGGCGATCGCCGACGCGGCGGGCGGCATGTGCGGACAGAATGTATTCGTGTCGCACGACATCGACGACATCGC GATCGCGATTGCGTTGAGCATCGACGAAGCCCATCGGTCCGATCGGCAGAAGCGCTCGCTCGACGCGCAAATCGATCGCG TGCTGCGCAAGTGGCGCGACAGGGGCTACGCGAGCGGCTCGCTGCACGACGCGAAGGCGACGCGCGCATCGCCGGGCGCG CCCGAGGCGCGGTGGCCCGACGTTGCGTTCTGGCTCCCCGAATCCGAGCGCATCGTCCGGCATGGCTCGGTATTGCTGAA AGCGCGGGACGGACGCGACGTGCGCATCGTCGAAGATCCGATCGGCAGCGTGCAGGCGGACGCGTCGGCCGTGCGGCCCC GGCCACGCCGGATGCGTACGTTCGAGTTCGTTTAG
Upstream 100 bases:
>100_bases TCCCGGTCGCCGCCGATAACCCTGACGGGCCAACGCGAAGGAACGCCCGTTCGCCGCGCGTCACATCGCTCCACGAACAC GACAACAACCGACTCCGACC
Downstream 100 bases:
>100_bases CCGGCGCGCGGCGGCCGATCTCGAGATCGCGGGGATCGTTTCCCCGGTTTGCGCGCCTTGCCGTTCGCTCTTCGCTCTTC GCTCTTCGCTCGCCACTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MTSPAQPTWRDTLSAFAYRHLRLPPPKLETGRFGWATRWFLDWLVPTGASAWAAYHLAAAFVAHYRSVLPANVGPDVPLG VMSELMSLANSKPFAYTGISLVAVLVALMFHRYLTWPAPGRWLNRRKRPVIHALPFMLGFLAGKLLAFAVPALAVAVAAY ASEGAIGAIAPLAAPIALLSAAYYFLLYDEVRPPAIVSLSFHRSRQRSAGACAIHQAREPDGAAAVGIGAWRDAHDELRD DVLAIADAAGGMCGQNVFVSHDIDDIAIAIALSIDEAHRSDRQKRSLDAQIDRVLRKWRDRGYASGSLHDAKATRASPGA PEARWPDVAFWLPESERIVRHGSVLLKARDGRDVRIVEDPIGSVQADASAVRPRPRRMRTFEFV
Sequences:
>Translated_384_residues MTSPAQPTWRDTLSAFAYRHLRLPPPKLETGRFGWATRWFLDWLVPTGASAWAAYHLAAAFVAHYRSVLPANVGPDVPLG VMSELMSLANSKPFAYTGISLVAVLVALMFHRYLTWPAPGRWLNRRKRPVIHALPFMLGFLAGKLLAFAVPALAVAVAAY ASEGAIGAIAPLAAPIALLSAAYYFLLYDEVRPPAIVSLSFHRSRQRSAGACAIHQAREPDGAAAVGIGAWRDAHDELRD DVLAIADAAGGMCGQNVFVSHDIDDIAIAIALSIDEAHRSDRQKRSLDAQIDRVLRKWRDRGYASGSLHDAKATRASPGA PEARWPDVAFWLPESERIVRHGSVLLKARDGRDVRIVEDPIGSVQADASAVRPRPRRMRTFEFV >Mature_383_residues TSPAQPTWRDTLSAFAYRHLRLPPPKLETGRFGWATRWFLDWLVPTGASAWAAYHLAAAFVAHYRSVLPANVGPDVPLGV MSELMSLANSKPFAYTGISLVAVLVALMFHRYLTWPAPGRWLNRRKRPVIHALPFMLGFLAGKLLAFAVPALAVAVAAYA SEGAIGAIAPLAAPIALLSAAYYFLLYDEVRPPAIVSLSFHRSRQRSAGACAIHQAREPDGAAAVGIGAWRDAHDELRDD VLAIADAAGGMCGQNVFVSHDIDDIAIAIALSIDEAHRSDRQKRSLDAQIDRVLRKWRDRGYASGSLHDAKATRASPGAP EARWPDVAFWLPESERIVRHGSVLLKARDGRDVRIVEDPIGSVQADASAVRPRPRRMRTFEFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42016; Mature: 41884
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPAQPTWRDTLSAFAYRHLRLPPPKLETGRFGWATRWFLDWLVPTGASAWAAYHLAAA CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH FVAHYRSVLPANVGPDVPLGVMSELMSLANSKPFAYTGISLVAVLVALMFHRYLTWPAPG HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCC RWLNRRKRPVIHALPFMLGFLAGKLLAFAVPALAVAVAAYASEGAIGAIAPLAAPIALLS HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AAYYFLLYDEVRPPAIVSLSFHRSRQRSAGACAIHQAREPDGAAAVGIGAWRDAHDELRD HHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCEEHHCCCCCCCCEEECCCHHHHHHHHHHH DVLAIADAAGGMCGQNVFVSHDIDDIAIAIALSIDEAHRSDRQKRSLDAQIDRVLRKWRD HHHHHHHHCCCCCCCCEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH RGYASGSLHDAKATRASPGAPEARWPDVAFWLPESERIVRHGSVLLKARDGRDVRIVEDP CCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHCCCEEEEECCCCEEEEECCC IGSVQADASAVRPRPRRMRTFEFV CCCCCCCHHHCCCCCHHCCCCCCC >Mature Secondary Structure TSPAQPTWRDTLSAFAYRHLRLPPPKLETGRFGWATRWFLDWLVPTGASAWAAYHLAAA CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH FVAHYRSVLPANVGPDVPLGVMSELMSLANSKPFAYTGISLVAVLVALMFHRYLTWPAPG HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCC RWLNRRKRPVIHALPFMLGFLAGKLLAFAVPALAVAVAAYASEGAIGAIAPLAAPIALLS HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AAYYFLLYDEVRPPAIVSLSFHRSRQRSAGACAIHQAREPDGAAAVGIGAWRDAHDELRD HHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCEEHHCCCCCCCCEEECCCHHHHHHHHHHH DVLAIADAAGGMCGQNVFVSHDIDDIAIAIALSIDEAHRSDRQKRSLDAQIDRVLRKWRD HHHHHHHHCCCCCCCCEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH RGYASGSLHDAKATRASPGAPEARWPDVAFWLPESERIVRHGSVLLKARDGRDVRIVEDP CCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHCCCEEEEECCCCEEEEECCC IGSVQADASAVRPRPRRMRTFEFV CCCCCCCHHHCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA