Click here to switch to the map view.

The map label for this gene is 53718941

Identifier: 53718941

GI number: 53718941

Start: 1520978

End: 1521415

Strand: Reverse

Name: 53718941

Synonym: BPSL1304A

Alternate gene names: NA

Gene position: 1521415-1520978 (Counterclockwise)

Preceding gene: 53718942

Following gene: 53718940

Centisome position: 37.34

GC content: 71.92

Gene sequence:

>438_bases
TTGACGACCGAGCCATTCCAGGCTTCCAACACGAACCGACATGTCATCGGCGCGGCATGCGCCGCCGTGCTCGGCGCAAC
CGCAACCGCGGCGGCGCACGCGCAAAGCAGCGTCGCGCTCCACGGGCTGCTCGACGCGAGCATCGCGTACACGAACAATC
AATCGGGCAAGCACACGTGGCGGCAAGGCCGCGGCCTGCCGTCGCACACGGTGTTCGGCCTGAGCGGCAGCGACGGGCCG
GGCGCTCGGCTTCGCGTCGCCCCACGTGCCGGGCGCATCGTCGACGCATACGCAAGTCGCGGCGACGATCGCCATCCGGC
ATCGGTTCCGACGGTGCGTTCCGACGGCGCGCCGCGAACGCCACCGAGCGTCCGGCGCGCGAACTCGGCGTGCCGCCGCC
GCGGGCGAAAGCGCATTGGAGGGCCCGACCGGTGGTAG

Upstream 100 bases:

>100_bases
GTGCAATCGATCCACGCGCCTTGCCGAACCGGCACGGCCGGCAACCGGCGAGCCGTCTCGCGCATCGGCCGCCGGCCGCG
CCCGGCAGTCGTCACGCTCT

Downstream 100 bases:

>100_bases
AATGCGCTCCGCCCTTGCCGGGGTGATGAAATTGGTAAACATAGCGGACTTAAACGATTGAGTGCCCGGCCGGAAACGGC
CGGTGCAGAACCCTTCAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MTTEPFQASNTNRHVIGAACAAVLGATATAAAHAQSSVALHGLLDASIAYTNNQSGKHTWRQGRGLPSHTVFGLSGSDGP
GARLRVAPRAGRIVDAYASRGDDRHPASVPTVRSDGAPRTPPSVRRANSACRRRGRKRIGGPDRW

Sequences:

>Translated_145_residues
MTTEPFQASNTNRHVIGAACAAVLGATATAAAHAQSSVALHGLLDASIAYTNNQSGKHTWRQGRGLPSHTVFGLSGSDGP
GARLRVAPRAGRIVDAYASRGDDRHPASVPTVRSDGAPRTPPSVRRANSACRRRGRKRIGGPDRW
>Mature_144_residues
TTEPFQASNTNRHVIGAACAAVLGATATAAAHAQSSVALHGLLDASIAYTNNQSGKHTWRQGRGLPSHTVFGLSGSDGPG
ARLRVAPRAGRIVDAYASRGDDRHPASVPTVRSDGAPRTPPSVRRANSACRRRGRKRIGGPDRW

Specific function: Unknown

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15212; Mature: 15081

Theoretical pI: Translated: 12.17; Mature: 12.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTEPFQASNTNRHVIGAACAAVLGATATAAAHAQSSVALHGLLDASIAYTNNQSGKHTW
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHH
RQGRGLPSHTVFGLSGSDGPGARLRVAPRAGRIVDAYASRGDDRHPASVPTVRSDGAPRT
HHCCCCCCCEEEEECCCCCCCCEEEECCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCC
PPSVRRANSACRRRGRKRIGGPDRW
CHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TTEPFQASNTNRHVIGAACAAVLGATATAAAHAQSSVALHGLLDASIAYTNNQSGKHTW
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHH
RQGRGLPSHTVFGLSGSDGPGARLRVAPRAGRIVDAYASRGDDRHPASVPTVRSDGAPRT
HHCCCCCCCEEEEECCCCCCCCEEEECCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCC
PPSVRRANSACRRRGRKRIGGPDRW
CHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA