| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is fbpB2 [H]
Identifier: 53718912
GI number: 53718912
Start: 1479266
End: 1480978
Strand: Reverse
Name: fbpB2 [H]
Synonym: BPSL1277
Alternate gene names: 53718912
Gene position: 1480978-1479266 (Counterclockwise)
Preceding gene: 53718913
Following gene: 53718911
Centisome position: 36.35
GC content: 74.96
Gene sequence:
>1713_bases TTGACAACTGAGGCCGACGCGCGCGTCGCGCGCCGCGCACACGCGCCGGTATGGGCGCGCGCCGGCGGGCGCGCGCGCCT TTCGCGCATCGCCGCGCACGGCTGGCTCGCCGGCGCGGCGGCGATCGCGGCCGTCGTCGGCACGCCGCTCGTCGCGCTCG CGTGCGCGGCGCTCGGCGCCGACCTGTCGCACTGGCGGCACCTGGCCGAATTCGTGCTGCCGCAGGCGGCCGCGAACACG CTCGCGCTGCTCGCGGGCGTCGGCGCGATCGTCACGTGCGTCGGCACGGGCGCCGCGTGGCTCGTCACCGCCTACGATTT TCCCGGCCGCCGCACGCTCGCGTGGGCGCTGCTGCTGCCGCTCGCGGTGCCGTCGTACATCGTCGCGTTCGCGTATCTCG ACCTGCTGCACCCGATCGGGCCCGTGCAGTCCGCGCTGCGCTGGGCGCTCGGCTTCGACAGCCCGCGCGAATTCCGTCTG CCCGAGCTGCGCTCGCTGCCGGGCGCGATCGTCGTGCTCGGCTTCGTGCTGTATCCGTACGTCTATCTGTGCACGCGCGC GATGTTCGTCACGCAATCGGCAAGCCTCGTCGAAGCCGCGCGCACGCTCGGCGCGGGCCGCATCGAAACCTTCGTTCGCG TCGTGCTGCCGCTCGCGCGGCCGGCGATCGCGGTCGGCGCGAGCCTCGCGCTGCTCGAGACGCTGAACGACGTCGGCGCG TCCGAGTTCCTCGGCGTGCAAACCCTCACCGTGTCCGTCTACACGACGTGGGTCACGCGCTCCGATCTCGCGAGCGCCGC GCAGATCGCGCTCGCGATGCTCGCGATCGTGCTCGGCGCGCTCGCGCTCGAACGCTACGGCCGCCGCCGCGAACGCTACG CGCACGGCCGCCGAATGCGCGCGATCGCGCCGCGCCGGCTGCGCGGCGCGGCCGCCGCCGGGGCGGCGGTGCTCGGCTGG CTGCCCGTCGCCGTCGGCTTCGGCGCGCCCGCCGCGTATCTCGTGCACGAAACCGCGCAACGCGTGCACCTCGTCGGCGG CGTATCGGCCCAGTTGCTCGCGAGCCTGGGCAACACGCTCGCCGTCGCGCTCACCGCGACCGTCGTCACGCTCGGCGGCG GCATCGTCGTCGCGTGGGCGACGCGCCGCACGCGCGACAGCGCGCGGTTCCAGCCGGGCCGCGTCTGCGCGCGGCTCGCG AGCGTCGGCTACGCGGTGCCGGGCACGGTGCTCGCGATCGGCCTGCTCGCGCCGCTCGCGCTCGCCGATCGCGCGATCGC CGCCGTGCTCGGCCGCGATGCGCTCGTGCTGATGGGCTCGGCCGCCGCGCTCGTGATCGCGTATGCGATCCGCTTCCTCG CGATTCCCGCGGGCGGCATCGAGGCCGGCCTCGCGCGCATTCCGGCGTCGCTCGAACAGGCGTCGCGCACGCTCGGCGAA TCGGCGGGCATGACCCTGCGGCGCGTGCACCTGCCGCTGCTGCGCCCCGCGCTCGGCGCGAGCGCGCTGCTCGTGTTCGT CGACGCGATGAAAGAGCTGCCCGCGACGCTGCTGCTGCGCCCGCTCAACTTCGACACGCTCGCCACCTGGCTCTATGCGG AGGCCGCGCGCGGCACCTACGAGGAAGGCGCGGTCGCGGCGCTCGCGATCGTCGCCGCGGGCCTCGCGCCCGTGATCGTG CTGGCGCGCACCCAACTGAAATCCGGATCCTGA
Upstream 100 bases:
>100_bases GTGATCGCCGGCTTCGGGCCGCTGAAGGTCGATCCGCTGCCGCTCGTCGAGATCGCGAAGTACCGCAAGCGCGCCAGCCA GCTCGTCGACAAGGTCGGCT
Downstream 100 bases:
>100_bases GATGCCCGCCATGCTGCTCGAACTGAACGCCGTCACGCTCGCCTACGACACGCCGCGCGGCCGGCGCACGATCGTCGATC GCCTGAGCCTCGCGCTCGAG
Product: ABC transporter membrane protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]
Number of amino acids: Translated: 570; Mature: 569
Protein sequence:
>570_residues MTTEADARVARRAHAPVWARAGGRARLSRIAAHGWLAGAAAIAAVVGTPLVALACAALGADLSHWRHLAEFVLPQAAANT LALLAGVGAIVTCVGTGAAWLVTAYDFPGRRTLAWALLLPLAVPSYIVAFAYLDLLHPIGPVQSALRWALGFDSPREFRL PELRSLPGAIVVLGFVLYPYVYLCTRAMFVTQSASLVEAARTLGAGRIETFVRVVLPLARPAIAVGASLALLETLNDVGA SEFLGVQTLTVSVYTTWVTRSDLASAAQIALAMLAIVLGALALERYGRRRERYAHGRRMRAIAPRRLRGAAAAGAAVLGW LPVAVGFGAPAAYLVHETAQRVHLVGGVSAQLLASLGNTLAVALTATVVTLGGGIVVAWATRRTRDSARFQPGRVCARLA SVGYAVPGTVLAIGLLAPLALADRAIAAVLGRDALVLMGSAAALVIAYAIRFLAIPAGGIEAGLARIPASLEQASRTLGE SAGMTLRRVHLPLLRPALGASALLVFVDAMKELPATLLLRPLNFDTLATWLYAEAARGTYEEGAVAALAIVAAGLAPVIV LARTQLKSGS
Sequences:
>Translated_570_residues MTTEADARVARRAHAPVWARAGGRARLSRIAAHGWLAGAAAIAAVVGTPLVALACAALGADLSHWRHLAEFVLPQAAANT LALLAGVGAIVTCVGTGAAWLVTAYDFPGRRTLAWALLLPLAVPSYIVAFAYLDLLHPIGPVQSALRWALGFDSPREFRL PELRSLPGAIVVLGFVLYPYVYLCTRAMFVTQSASLVEAARTLGAGRIETFVRVVLPLARPAIAVGASLALLETLNDVGA SEFLGVQTLTVSVYTTWVTRSDLASAAQIALAMLAIVLGALALERYGRRRERYAHGRRMRAIAPRRLRGAAAAGAAVLGW LPVAVGFGAPAAYLVHETAQRVHLVGGVSAQLLASLGNTLAVALTATVVTLGGGIVVAWATRRTRDSARFQPGRVCARLA SVGYAVPGTVLAIGLLAPLALADRAIAAVLGRDALVLMGSAAALVIAYAIRFLAIPAGGIEAGLARIPASLEQASRTLGE SAGMTLRRVHLPLLRPALGASALLVFVDAMKELPATLLLRPLNFDTLATWLYAEAARGTYEEGAVAALAIVAAGLAPVIV LARTQLKSGS >Mature_569_residues TTEADARVARRAHAPVWARAGGRARLSRIAAHGWLAGAAAIAAVVGTPLVALACAALGADLSHWRHLAEFVLPQAAANTL ALLAGVGAIVTCVGTGAAWLVTAYDFPGRRTLAWALLLPLAVPSYIVAFAYLDLLHPIGPVQSALRWALGFDSPREFRLP ELRSLPGAIVVLGFVLYPYVYLCTRAMFVTQSASLVEAARTLGAGRIETFVRVVLPLARPAIAVGASLALLETLNDVGAS EFLGVQTLTVSVYTTWVTRSDLASAAQIALAMLAIVLGALALERYGRRRERYAHGRRMRAIAPRRLRGAAAAGAAVLGWL PVAVGFGAPAAYLVHETAQRVHLVGGVSAQLLASLGNTLAVALTATVVTLGGGIVVAWATRRTRDSARFQPGRVCARLAS VGYAVPGTVLAIGLLAPLALADRAIAAVLGRDALVLMGSAAALVIAYAIRFLAIPAGGIEAGLARIPASLEQASRTLGES AGMTLRRVHLPLLRPALGASALLVFVDAMKELPATLLLRPLNFDTLATWLYAEAARGTYEEGAVAALAIVAAGLAPVIVL ARTQLKSGS
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 59247; Mature: 59116
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: PS50928 ABC_TM1 ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEADARVARRAHAPVWARAGGRARLSRIAAHGWLAGAAAIAAVVGTPLVALACAALGA CCCCHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DLSHWRHLAEFVLPQAAANTLALLAGVGAIVTCVGTGAAWLVTAYDFPGRRTLAWALLLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH LAVPSYIVAFAYLDLLHPIGPVQSALRWALGFDSPREFRLPELRSLPGAIVVLGFVLYPY HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHH VYLCTRAMFVTQSASLVEAARTLGAGRIETFVRVVLPLARPAIAVGASLALLETLNDVGA HHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCH SEFLGVQTLTVSVYTTWVTRSDLASAAQIALAMLAIVLGALALERYGRRRERYAHGRRMR HHHHCHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH AIAPRRLRGAAAAGAAVLGWLPVAVGFGAPAAYLVHETAQRVHLVGGVSAQLLASLGNTL HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHH AVALTATVVTLGGGIVVAWATRRTRDSARFQPGRVCARLASVGYAVPGTVLAIGLLAPLA HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LADRAIAAVLGRDALVLMGSAAALVIAYAIRFLAIPAGGIEAGLARIPASLEQASRTLGE HHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHH SAGMTLRRVHLPLLRPALGASALLVFVDAMKELPATLLLRPLNFDTLATWLYAEAARGTY HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCHHHHHHHHHHHHHCCCC EEGAVAALAIVAAGLAPVIVLARTQLKSGS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTEADARVARRAHAPVWARAGGRARLSRIAAHGWLAGAAAIAAVVGTPLVALACAALGA CCCHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DLSHWRHLAEFVLPQAAANTLALLAGVGAIVTCVGTGAAWLVTAYDFPGRRTLAWALLLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH LAVPSYIVAFAYLDLLHPIGPVQSALRWALGFDSPREFRLPELRSLPGAIVVLGFVLYPY HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHH VYLCTRAMFVTQSASLVEAARTLGAGRIETFVRVVLPLARPAIAVGASLALLETLNDVGA HHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCH SEFLGVQTLTVSVYTTWVTRSDLASAAQIALAMLAIVLGALALERYGRRRERYAHGRRMR HHHHCHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH AIAPRRLRGAAAAGAAVLGWLPVAVGFGAPAAYLVHETAQRVHLVGGVSAQLLASLGNTL HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHH AVALTATVVTLGGGIVVAWATRRTRDSARFQPGRVCARLASVGYAVPGTVLAIGLLAPLA HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LADRAIAAVLGRDALVLMGSAAALVIAYAIRFLAIPAGGIEAGLARIPASLEQASRTLGE HHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHH SAGMTLRRVHLPLLRPALGASALLVFVDAMKELPATLLLRPLNFDTLATWLYAEAARGTY HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCHHHHHHHHHHHHHCCCC EEGAVAALAIVAAGLAPVIVLARTQLKSGS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 7927717 [H]