Click here to switch to the map view.

The map label for this gene is 53718883

Identifier: 53718883

GI number: 53718883

Start: 1439881

End: 1440954

Strand: Reverse

Name: 53718883

Synonym: BPSL1248

Alternate gene names: NA

Gene position: 1440954-1439881 (Counterclockwise)

Preceding gene: 53718887

Following gene: 53718881

Centisome position: 35.36

GC content: 63.04

Gene sequence:

>1074_bases
ATGAACAAGACTTTGCGCTTCAAGAATGACGCGGAAAAGGTCGCGCACGTCCGCAACGAGGTCAATGCCGCGAGCGATGC
GCTGCGCGCGAAATATCCGCTGCTCGACAATCAGAATCTGATCGGCGCGGCCGTGATGGCGCTATGCGTCGCGACGCTGA
TCGGCAGCGCGTATCTGTATGCGATCGGCGCGATCGCGTGGTACGTCGCGCTGCCGATCGCGACGCTCGCGACGTCGCTG
ATCCACGAGCTCGAGCACGATCTGATCCATTTGATGTACTTCAAGAAGACGCCGTGGGCCTATCACGCGATGATGACGCT
CTGCTGGCTCACCCGGCCCGGCACGATCAATCCGTGGACGCGCCGGCGTATGCATCTGCACCATCACAAGGTATCGGGCG
GCGAGTCCGATCTCGAGGAATACGGCATCACCAACGGCGAGCGCTGGGGCCTGAAGCGTCTGCTGATGCTCGCGGACGGC
ATGCTCGCCGTCGCGCTGCGGCCGCTCGGCATGCGACGCAAAGTGCTGCAGTACGTTGCCGCTCAGCCCGCGCAGGCACG
CGGCGACCGCGTGCGGCTGCGCATCGAGCAACTGATGTCGTACATGCCGATCGGCCACGTCTATTACGTGCTGTGGCACG
CGTTCATCGCCTATCACGCCGGGCTCTTCGCCCTGCACGCGCTCGGCTATCACCCGGCGGTGCCTGCGCTCGTCCAGCAG
ACGATGCACGTCGTCGACTTCCTGGCGGTGACCTGGCTCGGGCCGAACTTCGTGCGCAGCTTCTGCATCAACTTCATCAG
CTCGAACATGCACTACTACGGCGATATCGATTCGCGCAACGTCGTTCAGCAGACACAAGTGCTGAACCCGTGGTGGCTGA
TCCCGGTGCAGTTGTTCTGCTTCAACTTCGGCAGCACGCACGCGATTCACCACTTCGTCGTGCGCGATCCGTTCTACATT
CGCCAGTTGACCGCGAAGCGGGCGCATGCGGCGATGCGCGCGGTCGGCGTGCGCTTCAATGACATCGGCACGTTCCGACG
CGCGAATCGCTGGAACGAGACGCGTGCCGCATGA

Upstream 100 bases:

>100_bases
ACTCGTTCTTTGGCACGACCGGCCCTCGCGGCCAAGGCGCGGACGGCTCTAAGATGGCCTCATCGGCAAACCGCCGATTT
CAGGGATATGGATTCGAACA

Downstream 100 bases:

>100_bases
TGCATGCGAACGGCGATGCGCCGCTCGGCCATCGCGCCGTGGCCGCGCATCGCTCGCTCGACTCGCTCGAAAAAAACGCC
GCCGAACGAATATTCGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Fatty Acid Desaturase Domain Protein; Fatty Acid Desaturase Domain-Containing Protein; Fatty Acid Desaturase Related Protein

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MNKTLRFKNDAEKVAHVRNEVNAASDALRAKYPLLDNQNLIGAAVMALCVATLIGSAYLYAIGAIAWYVALPIATLATSL
IHELEHDLIHLMYFKKTPWAYHAMMTLCWLTRPGTINPWTRRRMHLHHHKVSGGESDLEEYGITNGERWGLKRLLMLADG
MLAVALRPLGMRRKVLQYVAAQPAQARGDRVRLRIEQLMSYMPIGHVYYVLWHAFIAYHAGLFALHALGYHPAVPALVQQ
TMHVVDFLAVTWLGPNFVRSFCINFISSNMHYYGDIDSRNVVQQTQVLNPWWLIPVQLFCFNFGSTHAIHHFVVRDPFYI
RQLTAKRAHAAMRAVGVRFNDIGTFRRANRWNETRAA

Sequences:

>Translated_357_residues
MNKTLRFKNDAEKVAHVRNEVNAASDALRAKYPLLDNQNLIGAAVMALCVATLIGSAYLYAIGAIAWYVALPIATLATSL
IHELEHDLIHLMYFKKTPWAYHAMMTLCWLTRPGTINPWTRRRMHLHHHKVSGGESDLEEYGITNGERWGLKRLLMLADG
MLAVALRPLGMRRKVLQYVAAQPAQARGDRVRLRIEQLMSYMPIGHVYYVLWHAFIAYHAGLFALHALGYHPAVPALVQQ
TMHVVDFLAVTWLGPNFVRSFCINFISSNMHYYGDIDSRNVVQQTQVLNPWWLIPVQLFCFNFGSTHAIHHFVVRDPFYI
RQLTAKRAHAAMRAVGVRFNDIGTFRRANRWNETRAA
>Mature_357_residues
MNKTLRFKNDAEKVAHVRNEVNAASDALRAKYPLLDNQNLIGAAVMALCVATLIGSAYLYAIGAIAWYVALPIATLATSL
IHELEHDLIHLMYFKKTPWAYHAMMTLCWLTRPGTINPWTRRRMHLHHHKVSGGESDLEEYGITNGERWGLKRLLMLADG
MLAVALRPLGMRRKVLQYVAAQPAQARGDRVRLRIEQLMSYMPIGHVYYVLWHAFIAYHAGLFALHALGYHPAVPALVQQ
TMHVVDFLAVTWLGPNFVRSFCINFISSNMHYYGDIDSRNVVQQTQVLNPWWLIPVQLFCFNFGSTHAIHHFVVRDPFYI
RQLTAKRAHAAMRAVGVRFNDIGTFRRANRWNETRAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40813; Mature: 40813

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure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HCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA