Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is 53718878

Identifier: 53718878

GI number: 53718878

Start: 1427377

End: 1428036

Strand: Reverse

Name: 53718878

Synonym: BPSL1243

Alternate gene names: NA

Gene position: 1428036-1427377 (Counterclockwise)

Preceding gene: 53718879

Following gene: 53718875

Centisome position: 35.05

GC content: 63.94

Gene sequence:

>660_bases
GTGCCTGGTGTCTCTATCGCGTTTATCTCATACCTCCAGATGGACAGTTTTCCCGCCTCGCTTCGCCTGCTCGGCGCGCT
CGGCAAGCTGACGGCCTGTGCCGCGGGCCTGTCGCTCGTGCTCGCCGCGCCCGCGTTCGCCGACTTGCTCGATCAACGCG
CCGAACTCGTCAACAAGTACGTCAACGAAATGCACGCCGATCCGCTCGTCGCGGATTGCGCCGCGCACGGCAACTTCATC
GCCAGCACGTCGAGCGCTTTCGATCACGTCGAATTTGCGCCGAACGCGTTCGACAGCGGCAGCGCATCGATCACGCCCTG
GAACGATTCGTTCGACGAAGGCAAGCAGCGCGTGAAAGTCGACAACATCGTGACCGTCGAGGGCCTCGGCGTGCGCGCGA
GCGGCGGCGATCCGGAACCTCTGAAGTTCCGCTGCGGCTATGTCGGCACGCAAATGCTCGCGTTCAGTTGGAACGATCCG
GTGCCGCCGGCGAAGCCGCGCGTCGAGCGCGCGACGTCATCGAAGAAGAAACTGCGCGCGCACTCGGGCAAAGGCAAGGT
CAAGGCGAAAGCGACGGGCAAGAGCGGCAAGCGCGCCGTGTCGAAGAAATCGAGCACGACGAAGAAGGCCGCGAAGAAAC
GCTCGACGCGCAAGTCGTGA

Upstream 100 bases:

>100_bases
GCGCCATCGTACGCGCGCGCAGGCCATACGGGCAATCGCTCTACTGCGGCGCCAAAAAATTACGCTAAGATGGAACCCTG
CTCTTCATCGGGCATCTCAT

Downstream 100 bases:

>100_bases
CGCGATCGGCCGAACGCCGGATTCCGGACGACAGGTGCCGGACCGGACCGTCGAGCGCAACCGACGCGTAGCACTCGCCG
TCACCCGCCCATCCGCCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MPGVSIAFISYLQMDSFPASLRLLGALGKLTACAAGLSLVLAAPAFADLLDQRAELVNKYVNEMHADPLVADCAAHGNFI
ASTSSAFDHVEFAPNAFDSGSASITPWNDSFDEGKQRVKVDNIVTVEGLGVRASGGDPEPLKFRCGYVGTQMLAFSWNDP
VPPAKPRVERATSSKKKLRAHSGKGKVKAKATGKSGKRAVSKKSSTTKKAAKKRSTRKS

Sequences:

>Translated_219_residues
MPGVSIAFISYLQMDSFPASLRLLGALGKLTACAAGLSLVLAAPAFADLLDQRAELVNKYVNEMHADPLVADCAAHGNFI
ASTSSAFDHVEFAPNAFDSGSASITPWNDSFDEGKQRVKVDNIVTVEGLGVRASGGDPEPLKFRCGYVGTQMLAFSWNDP
VPPAKPRVERATSSKKKLRAHSGKGKVKAKATGKSGKRAVSKKSSTTKKAAKKRSTRKS
>Mature_218_residues
PGVSIAFISYLQMDSFPASLRLLGALGKLTACAAGLSLVLAAPAFADLLDQRAELVNKYVNEMHADPLVADCAAHGNFIA
STSSAFDHVEFAPNAFDSGSASITPWNDSFDEGKQRVKVDNIVTVEGLGVRASGGDPEPLKFRCGYVGTQMLAFSWNDPV
PPAKPRVERATSSKKKLRAHSGKGKVKAKATGKSGKRAVSKKSSTTKKAAKKRSTRKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23226; Mature: 23095

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGVSIAFISYLQMDSFPASLRLLGALGKLTACAAGLSLVLAAPAFADLLDQRAELVNKY
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNEMHADPLVADCAAHGNFIASTSSAFDHVEFAPNAFDSGSASITPWNDSFDEGKQRVKV
HHHHCCCCHHHHHHHCCCEEECCCCHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHEEEE
DNIVTVEGLGVRASGGDPEPLKFRCGYVGTQMLAFSWNDPVPPAKPRVERATSSKKKLRA
CCEEEECCCEEECCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
HSGKGKVKAKATGKSGKRAVSKKSSTTKKAAKKRSTRKS
CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PGVSIAFISYLQMDSFPASLRLLGALGKLTACAAGLSLVLAAPAFADLLDQRAELVNKY
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNEMHADPLVADCAAHGNFIASTSSAFDHVEFAPNAFDSGSASITPWNDSFDEGKQRVKV
HHHHCCCCHHHHHHHCCCEEECCCCHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHEEEE
DNIVTVEGLGVRASGGDPEPLKFRCGYVGTQMLAFSWNDPVPPAKPRVERATSSKKKLRA
CCEEEECCCEEECCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
HSGKGKVKAKATGKSGKRAVSKKSSTTKKAAKKRSTRKS
CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA