Click here to switch to the map view.

The map label for this gene is 53718823

Identifier: 53718823

GI number: 53718823

Start: 1372307

End: 1372894

Strand: Reverse

Name: 53718823

Synonym: BPSL1187

Alternate gene names: NA

Gene position: 1372894-1372307 (Counterclockwise)

Preceding gene: 53718824

Following gene: 53718822

Centisome position: 33.69

GC content: 67.35

Gene sequence:

>588_bases
ATGAACAGCGTCTGCGTCTATTGCGGTTCGGCCAACGGCGCGAAGCCCGTCTACGCGGACGCGGCGCGCGCGTTCGGCCG
CGCGCTCGCGAACGCCGGCCTCACGCTCGTCTACGGCGGCGGGCGCGTCGGCCTGATGGGCGTGATCGCCGACGAGGTGA
TCGCATCGGGCGGACGCGCGATCGGCGTCATCACGGAGCTGCTCTACGACAAGGAAGTCGGCCACACCGGCTTGACCGAG
CTGCACGTGGTGCCCGACATGCATCACCGCAAGAAGATGATGGCCGAGCTCGCGGATGCGTTCGTCGCGATGCCGGGCGG
CGCGGGCACGCTCGAAGAGTTCTTCGAGGTCTACACGTGGGCGCAGCTCGGCTATCACCGCAAGCCCGTCGCGCTCTACA
ACGTCGACGCGTTCTACCAGCCGCTCATCACGCTGCTCGAGCACACCGTCGACGAAGGCTTCATGCAGCGCACGTACTTC
GACGCGCTGTGCATCGACGCCGCGCCCGACGCGCTCATCGATCAGCTCGTCCGGTATCGTCCGCCCGCGCGCGACAAATG
GACGTTCGTGTCGACGCAGGAAGCCTGA

Upstream 100 bases:

>100_bases
GGCAGATCTTCGACGATCTCGTGTCGGGCAAGCTGCCGAAGCGCGAATTCCACGACTACCTGCCCCCGCGCGACGGTTCG
CCGCGCAAGGACACGAAGCA

Downstream 100 bases:

>100_bases
GCGGGCACGGCGCGGGGCATTCACGCGCGGCATCGCGGAGCGCGCCGCCGCCTCGCCCGTCAGCTCGGCTTCGGGCCGAT
GCGGCGCCCTGTGCTCGATG

Product: putative decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MNSVCVYCGSANGAKPVYADAARAFGRALANAGLTLVYGGGRVGLMGVIADEVIASGGRAIGVITELLYDKEVGHTGLTE
LHVVPDMHHRKKMMAELADAFVAMPGGAGTLEEFFEVYTWAQLGYHRKPVALYNVDAFYQPLITLLEHTVDEGFMQRTYF
DALCIDAAPDALIDQLVRYRPPARDKWTFVSTQEA

Sequences:

>Translated_195_residues
MNSVCVYCGSANGAKPVYADAARAFGRALANAGLTLVYGGGRVGLMGVIADEVIASGGRAIGVITELLYDKEVGHTGLTE
LHVVPDMHHRKKMMAELADAFVAMPGGAGTLEEFFEVYTWAQLGYHRKPVALYNVDAFYQPLITLLEHTVDEGFMQRTYF
DALCIDAAPDALIDQLVRYRPPARDKWTFVSTQEA
>Mature_195_residues
MNSVCVYCGSANGAKPVYADAARAFGRALANAGLTLVYGGGRVGLMGVIADEVIASGGRAIGVITELLYDKEVGHTGLTE
LHVVPDMHHRKKMMAELADAFVAMPGGAGTLEEFFEVYTWAQLGYHRKPVALYNVDAFYQPLITLLEHTVDEGFMQRTYF
DALCIDAAPDALIDQLVRYRPPARDKWTFVSTQEA

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=206, Percent_Identity=40.7766990291262, Blast_Score=160, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 21263; Mature: 21263

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSVCVYCGSANGAKPVYADAARAFGRALANAGLTLVYGGGRVGLMGVIADEVIASGGRA
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCCH
IGVITELLYDKEVGHTGLTELHVVPDMHHRKKMMAELADAFVAMPGGAGTLEEFFEVYTW
HHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
AQLGYHRKPVALYNVDAFYQPLITLLEHTVDEGFMQRTYFDALCIDAAPDALIDQLVRYR
HHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
PPARDKWTFVSTQEA
CCCCCCEEEEECCCC
>Mature Secondary Structure
MNSVCVYCGSANGAKPVYADAARAFGRALANAGLTLVYGGGRVGLMGVIADEVIASGGRA
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCCH
IGVITELLYDKEVGHTGLTELHVVPDMHHRKKMMAELADAFVAMPGGAGTLEEFFEVYTW
HHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
AQLGYHRKPVALYNVDAFYQPLITLLEHTVDEGFMQRTYFDALCIDAAPDALIDQLVRYR
HHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
PPARDKWTFVSTQEA
CCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 2116366 [H]