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The map label for this gene is yebC [C]

Identifier: 53718801

GI number: 53718801

Start: 1343982

End: 1344710

Strand: Reverse

Name: yebC [C]

Synonym: BPSL1165

Alternate gene names: 53718801

Gene position: 1344710-1343982 (Counterclockwise)

Preceding gene: 53718802

Following gene: 53718800

Centisome position: 33.0

GC content: 64.47

Gene sequence:

>729_bases
ATGGCTGGTCACTCGAAATGGGCCAACATCAAGCATAAGAAAGCGGCGGCCGATGCGAAGCGCGGCAAGATCTGGACGCG
CCTCATCAAGGAAATCCAGGTGGCCGCGCGCCTGGGCGGCGGCGACGTGAACTCGAACCCGCGCCTGCGTCTCGCGGTCG
ACAAGGCAGCCGACGCGAACATGCCGAAGGACAACGTGAAGCGCGCGATCGATCGCGGCGTGGGCGGCGCGGACGGCGCG
AACTACGAAGAGATCCGCTACGAAGGCTACGGCATCGGCGGCGCGGCGATCATCGTCGACACGCTCACCGACAACCGCAC
CCGCACGGTCGCCGAAGTGCGCCACGCGTTCTCGAAGTTCGGCGGCAACATGGGCACCGACGGCTCGGTCGCGTTCATGT
TCGATCACGTCGGCCAGTTCCTGTTCGCGCCGGGCACGTCGGAGGACGCGCTGATGGAAGCCGCGCTCGAGGCGGGCGCG
AACGACGTCAACACGAACGACGACGGCTCGATCGAAGTGCTGTGCGACTGGCAGGAATTCTCGAAGGTGAAGGACGCGCT
CGAGGCGGCGGGCTTCAAGGCCGAACTCGCCGAAGTCACGATGAAGCCGCAGAACGAAGTCGATTTCACCGGCGAAGATG
CGGTGAAGATGCAAAAGCTCCTGGACGCGCTCGAGAATCTCGACGACGTGCAGGAGGTCTACACGAACGCCGTCGTCGTC
GAGGAATGA

Upstream 100 bases:

>100_bases
GGCCCAAGCGGCACTCGCCCGCTCAAGCGGCCGCCGGACTCAACGACAGACACATTGCTAGACGCCGGCGCGGGCTACGC
GCGGGCGCACGGAGAAAAGT

Downstream 100 bases:

>100_bases
GCATTGCGCGGCCGCCCTTTCGCGCGAAGGACGGCGGCCGCGGCCGTCTCTCGCGGCCGGCCCGCATCGCGCGCGCCGGC
CGCCCTATTTTCTAGTCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MAGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDVNSNPRLRLAVDKAADANMPKDNVKRAIDRGVGGADGA
NYEEIRYEGYGIGGAAIIVDTLTDNRTRTVAEVRHAFSKFGGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGA
NDVNTNDDGSIEVLCDWQEFSKVKDALEAAGFKAELAEVTMKPQNEVDFTGEDAVKMQKLLDALENLDDVQEVYTNAVVV
EE

Sequences:

>Translated_242_residues
MAGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDVNSNPRLRLAVDKAADANMPKDNVKRAIDRGVGGADGA
NYEEIRYEGYGIGGAAIIVDTLTDNRTRTVAEVRHAFSKFGGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGA
NDVNTNDDGSIEVLCDWQEFSKVKDALEAAGFKAELAEVTMKPQNEVDFTGEDAVKMQKLLDALENLDDVQEVYTNAVVV
EE
>Mature_241_residues
AGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDVNSNPRLRLAVDKAADANMPKDNVKRAIDRGVGGADGAN
YEEIRYEGYGIGGAAIIVDTLTDNRTRTVAEVRHAFSKFGGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGAN
DVNTNDDGSIEVLCDWQEFSKVKDALEAAGFKAELAEVTMKPQNEVDFTGEDAVKMQKLLDALENLDDVQEVYTNAVVVE
E

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=245, Percent_Identity=26.530612244898, Blast_Score=104, Evalue=7e-23,
Organism=Escherichia coli, GI1788171, Length=242, Percent_Identity=61.5702479338843, Blast_Score=298, Evalue=2e-82,
Organism=Escherichia coli, GI1788294, Length=234, Percent_Identity=41.4529914529915, Blast_Score=156, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17556100, Length=243, Percent_Identity=25.5144032921811, Blast_Score=74, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=33.7121212121212, Blast_Score=124, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24583305, Length=247, Percent_Identity=27.5303643724696, Blast_Score=91, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 26122; Mature: 25991

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDVNSNPRLRLAVDKAADAN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCC
MPKDNVKRAIDRGVGGADGANYEEIRYEGYGIGGAAIIVDTLTDNRTRTVAEVRHAFSKF
CCHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
GGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGANDVNTNDDGSIEVLCDWQEF
CCCCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHH
SKVKDALEAAGFKAELAEVTMKPQNEVDFTGEDAVKMQKLLDALENLDDVQEVYTNAVVV
HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCEEE
EE
CC
>Mature Secondary Structure 
AGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDVNSNPRLRLAVDKAADAN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCC
MPKDNVKRAIDRGVGGADGANYEEIRYEGYGIGGAAIIVDTLTDNRTRTVAEVRHAFSKF
CCHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
GGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGANDVNTNDDGSIEVLCDWQEF
CCCCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHH
SKVKDALEAAGFKAELAEVTMKPQNEVDFTGEDAVKMQKLLDALENLDDVQEVYTNAVVV
HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCEEE
EE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA