The gene/protein map for NC_006350 is currently unavailable.
Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is 53718775

Identifier: 53718775

GI number: 53718775

Start: 1325660

End: 1326949

Strand: Reverse

Name: 53718775

Synonym: BPSL1140

Alternate gene names: NA

Gene position: 1326949-1325660 (Counterclockwise)

Preceding gene: 53718776

Following gene: 53718774

Centisome position: 32.57

GC content: 63.8

Gene sequence:

>1290_bases
ATGCGGCTGCTTTCGTGGATACGAAAAGCCGCTCCGCCGGTTGCGGTCGGCGGCGGCAATTCGATTGCTGGCGTCGTGCG
CGAGCCGTTCGCGGGCGCGTGGCAGGCTGGAATGGGCATTGATAGCCGTCACGATCTGCTCGCGTTCTCGGCCGTGTACG
CGTGTGTGGATCGCATCGCGTCGGACATTTCGAAGCTCGGCATCCGGTACGTGAAGCAGATCGGCAATATCTGGCAGGAC
GCCAGCGCGCCACGCTTCACGGGGCCGTTGCGCCGGCCGAACCCGTACCAAAATCGAATTCAGTTCGTGAAGGCGTGGCA
GGTGTCGAAGCTGCTCGCCGGCAACACGTATGTCCTGCTCGTTCGCGACATGCTGCGCAACGTAACTGCGATGTACGTGC
TCGATCCGGCGCGCGTGATTCCGCTCGTCGCGCCGAGCGGCGCCGTGTTCTATCAGGTCGCCGCCGATCCGCTTCGCGGC
GTACCCGGGCAAGTCACGATTCCCGCGTCCGAGATCATCCATGATCGCGGTATCTGCCCGTGGCATCCGCTCATCGGCGT
ATCGCCGATCGTCGCGGCAGCGGCTGCCGGCACGATGGGAAACCGTATCCAGCAAAACAGCCGGAAGTTCTTCGGCAATA
TGTCGCGGCCCGGCGGCATCCTGTCCGCGCCCGGCAAGATCAGCGACGAAACCGCAAACCGGCTCAAGACGCATTGGGAA
ACGAACTACGGCGGTGAGAATGCCGGCCGTTTGGCCGTCGTGGGCGACGGGCTGAAGTACGAAACCGTCATGATGACCGC
GACCGATGCGCAGCTCGTCGAGCAGCTTCGGTGGGCTGTCGAGGATGTTGCGCGCTGCTACCACGTACCGCTCTACAAGA
TCGGCGCGGACCCAACCGGCTCGAAAACGGCGGCCAACATCGGCGCGCTCGAACAGTCGTACTACACCGATTGCCTGCAA
GCCCCGATCGAAGAGCTCGAACTCTGTCTCGATGACGGTTTCGAGGTGCCGGACGGACAGGGTTTCGACGTTGATGTGCG
CGGGCTACTGCGCATGGACCCGGCCGCGCGTTACGACGCGCACTCGAAAGCCGTAGGCGGCGGCTGGATGGCCCCGAATG
AGGCGCGCGCAGCGGAGAACATGCCGCCTGTGCCGGGCGGCGATACGCCGTATCTGCAACAGCAGAACTATTCGCTCGGC
GCACTCGCGAAGCGCGACAAGCACCCGGCGCCAAGCAGCGCGACGTTGACCAGCACATCTGCATCGAAGGAGCCGACAAA
TGGCAATTAA

Upstream 100 bases:

>100_bases
AAGAACAGCACGTCGCCTTGCTACGCCTGCTCGACAAGATTCGCGATGCTGTGCCGAAGCGGTCGACGTACATGCGACGC
GACATGCGGCCGGGGGATTG

Downstream 100 bases:

>100_bases
GCAACTCGTCTCGTTCAATCGCGCACTCTCGCACCTGCGCGTCGAAGCGGGCGAGGATGACGACGCGATTAAGGATCTGA
TCGACGCTGCCAGCGATATC

Product: putative phage-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MRLLSWIRKAAPPVAVGGGNSIAGVVREPFAGAWQAGMGIDSRHDLLAFSAVYACVDRIASDISKLGIRYVKQIGNIWQD
ASAPRFTGPLRRPNPYQNRIQFVKAWQVSKLLAGNTYVLLVRDMLRNVTAMYVLDPARVIPLVAPSGAVFYQVAADPLRG
VPGQVTIPASEIIHDRGICPWHPLIGVSPIVAAAAAGTMGNRIQQNSRKFFGNMSRPGGILSAPGKISDETANRLKTHWE
TNYGGENAGRLAVVGDGLKYETVMMTATDAQLVEQLRWAVEDVARCYHVPLYKIGADPTGSKTAANIGALEQSYYTDCLQ
APIEELELCLDDGFEVPDGQGFDVDVRGLLRMDPAARYDAHSKAVGGGWMAPNEARAAENMPPVPGGDTPYLQQQNYSLG
ALAKRDKHPAPSSATLTSTSASKEPTNGN

Sequences:

>Translated_429_residues
MRLLSWIRKAAPPVAVGGGNSIAGVVREPFAGAWQAGMGIDSRHDLLAFSAVYACVDRIASDISKLGIRYVKQIGNIWQD
ASAPRFTGPLRRPNPYQNRIQFVKAWQVSKLLAGNTYVLLVRDMLRNVTAMYVLDPARVIPLVAPSGAVFYQVAADPLRG
VPGQVTIPASEIIHDRGICPWHPLIGVSPIVAAAAAGTMGNRIQQNSRKFFGNMSRPGGILSAPGKISDETANRLKTHWE
TNYGGENAGRLAVVGDGLKYETVMMTATDAQLVEQLRWAVEDVARCYHVPLYKIGADPTGSKTAANIGALEQSYYTDCLQ
APIEELELCLDDGFEVPDGQGFDVDVRGLLRMDPAARYDAHSKAVGGGWMAPNEARAAENMPPVPGGDTPYLQQQNYSLG
ALAKRDKHPAPSSATLTSTSASKEPTNGN
>Mature_429_residues
MRLLSWIRKAAPPVAVGGGNSIAGVVREPFAGAWQAGMGIDSRHDLLAFSAVYACVDRIASDISKLGIRYVKQIGNIWQD
ASAPRFTGPLRRPNPYQNRIQFVKAWQVSKLLAGNTYVLLVRDMLRNVTAMYVLDPARVIPLVAPSGAVFYQVAADPLRG
VPGQVTIPASEIIHDRGICPWHPLIGVSPIVAAAAAGTMGNRIQQNSRKFFGNMSRPGGILSAPGKISDETANRLKTHWE
TNYGGENAGRLAVVGDGLKYETVMMTATDAQLVEQLRWAVEDVARCYHVPLYKIGADPTGSKTAANIGALEQSYYTDCLQ
APIEELELCLDDGFEVPDGQGFDVDVRGLLRMDPAARYDAHSKAVGGGWMAPNEARAAENMPPVPGGDTPYLQQQNYSLG
ALAKRDKHPAPSSATLTSTSASKEPTNGN

Specific function: Unknown

COG id: COG4695

COG function: function code S; Phage-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. HK97 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006427 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 46150; Mature: 46150

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLSWIRKAAPPVAVGGGNSIAGVVREPFAGAWQAGMGIDSRHDLLAFSAVYACVDRIA
CHHHHHHHHCCCCEEECCCCCHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHH
SDISKLGIRYVKQIGNIWQDASAPRFTGPLRRPNPYQNRIQFVKAWQVSKLLAGNTYVLL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEH
VRDMLRNVTAMYVLDPARVIPLVAPSGAVFYQVAADPLRGVPGQVTIPASEIIHDRGICP
HHHHHHCCCEEEEECHHHEEEEECCCCCEEEEEECCHHCCCCCEEEECHHHHHHHCCCCC
WHPLIGVSPIVAAAAAGTMGNRIQQNSRKFFGNMSRPGGILSAPGKISDETANRLKTHWE
CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHCC
TNYGGENAGRLAVVGDGLKYETVMMTATDAQLVEQLRWAVEDVARCYHVPLYKIGADPTG
CCCCCCCCCEEEEEECCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC
SKTAANIGALEQSYYTDCLQAPIEELELCLDDGFEVPDGQGFDVDVRGLLRMDPAARYDA
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHEECCCHHHCCC
HSKAVGGGWMAPNEARAAENMPPVPGGDTPYLQQQNYSLGALAKRDKHPAPSSATLTSTS
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHCCCCCCCCCCEEECCC
ASKEPTNGN
CCCCCCCCC
>Mature Secondary Structure
MRLLSWIRKAAPPVAVGGGNSIAGVVREPFAGAWQAGMGIDSRHDLLAFSAVYACVDRIA
CHHHHHHHHCCCCEEECCCCCHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHH
SDISKLGIRYVKQIGNIWQDASAPRFTGPLRRPNPYQNRIQFVKAWQVSKLLAGNTYVLL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEH
VRDMLRNVTAMYVLDPARVIPLVAPSGAVFYQVAADPLRGVPGQVTIPASEIIHDRGICP
HHHHHHCCCEEEEECHHHEEEEECCCCCEEEEEECCHHCCCCCEEEECHHHHHHHCCCCC
WHPLIGVSPIVAAAAAGTMGNRIQQNSRKFFGNMSRPGGILSAPGKISDETANRLKTHWE
CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHCC
TNYGGENAGRLAVVGDGLKYETVMMTATDAQLVEQLRWAVEDVARCYHVPLYKIGADPTG
CCCCCCCCCEEEEEECCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC
SKTAANIGALEQSYYTDCLQAPIEELELCLDDGFEVPDGQGFDVDVRGLLRMDPAARYDA
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHEECCCHHHCCC
HSKAVGGGWMAPNEARAAENMPPVPGGDTPYLQQQNYSLGALAKRDKHPAPSSATLTSTS
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHCCCCCCCCCCEEECCC
ASKEPTNGN
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA