| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is hisJ [H]
Identifier: 53718673
GI number: 53718673
Start: 1202831
End: 1203607
Strand: Reverse
Name: hisJ [H]
Synonym: BPSL1033
Alternate gene names: 53718673
Gene position: 1203607-1202831 (Counterclockwise)
Preceding gene: 53718675
Following gene: 53718672
Centisome position: 29.54
GC content: 65.89
Gene sequence:
>777_bases ATGAAGAAGCTCGCCCTGTGCGCGGCCCTCGCCCTTGCGGCGGGCGGCGCCTTCGCGAAGGAATGGAAGACCGTGCGGAT CGGCGTCGACGCCAGCTATCCGCCGTTCGAATCGACCGCGCCGAGCGGCGAGATCGTCGGATTCGACGTCGATCTCGCGA AGGAAGTCTGCAAGCGGATCAACGCGAAGTGCACATGGACGCCGCAGGATCTCGACGGCATCATCCCCGCGCTGAAGGCG AAGAAGTTCGACGTGATCGTGTCGTCGCTGACCGTCACCGACAAGCGCCGCGAGCAGATCGATTTCTCCGACAAGCTGTA CGACGCGCCCGCGCGAATGATCGCGAAGGCGGGCTCGCCGCTCGCGCCGAGCGTCGAGTCGCTCAAGGGCAAGCGCGTCG GCGTCGAGCAGGGCTCGACCCAGGAAACCTTCGCGAAGGCGCACTGGGAGCCGAAGGGCGTGACGATCGTGTCGTACCAG AACCAGGATCAGGTGTATGCCGATCTCGGCTCGGGGCGTCTCGATGCGACGCTGCAAGACGAGTTGCAGGCCGACTACGG CTTCCTGCGCACGCCGCGCGGCAAGGGCTTCGCCTGGGCAGGTCCGGCCGTGAAGGATCCGCGCACGCTCGGCGACGGCA CCGCGATGGGCCTGCGCAAGGAAGACGCGGACCTGAAGGACGCGATCAACCGCGCGCTCGCTTCGATGCACAAGGACGGC ACGTACGACAGGCTCTCGCGCAAGTACTTCCCGTACAGCGTGTATTCGGCGAAGTAA
Upstream 100 bases:
>100_bases GATCGACGAACGCGAATTTTGGCCGCCTAGAATACGCCCGGCGCGCGCATGCCCGGACGCATCCGGCCGCGCGGCCGGGG AAGTCAGGAAGAGGAACGAC
Downstream 100 bases:
>100_bases GCGCCGAGCGGGCTGCGCCAAGCGACCGGCGCGCGGCCCGCGCAGCACCAGCGGTCGACACCAAGCGCCGCGATGCGCCG CCGCCCTGCCCGAGCGCAGG
Product: histidine-binding periplasmic protein
Products: ADP; phosphate; L-ornithine [Cytoplasm]; ADP; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: LAO-binding protein [H]
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MKKLALCAALALAAGGAFAKEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRINAKCTWTPQDLDGIIPALKA KKFDVIVSSLTVTDKRREQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVGVEQGSTQETFAKAHWEPKGVTIVSYQ NQDQVYADLGSGRLDATLQDELQADYGFLRTPRGKGFAWAGPAVKDPRTLGDGTAMGLRKEDADLKDAINRALASMHKDG TYDRLSRKYFPYSVYSAK
Sequences:
>Translated_258_residues MKKLALCAALALAAGGAFAKEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRINAKCTWTPQDLDGIIPALKA KKFDVIVSSLTVTDKRREQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVGVEQGSTQETFAKAHWEPKGVTIVSYQ NQDQVYADLGSGRLDATLQDELQADYGFLRTPRGKGFAWAGPAVKDPRTLGDGTAMGLRKEDADLKDAINRALASMHKDG TYDRLSRKYFPYSVYSAK >Mature_258_residues MKKLALCAALALAAGGAFAKEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRINAKCTWTPQDLDGIIPALKA KKFDVIVSSLTVTDKRREQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVGVEQGSTQETFAKAHWEPKGVTIVSYQ NQDQVYADLGSGRLDATLQDELQADYGFLRTPRGKGFAWAGPAVKDPRTLGDGTAMGLRKEDADLKDAINRALASMHKDG TYDRLSRKYFPYSVYSAK
Specific function: This periplasmic binding protein is involved in an arginine transport system. ArgT and histidine-binding protein J (hisJ) interact with a common membrane-bound receptor, hisP [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788649, Length=258, Percent_Identity=55.4263565891473, Blast_Score=299, Evalue=1e-82, Organism=Escherichia coli, GI1788648, Length=233, Percent_Identity=56.6523605150215, Blast_Score=297, Evalue=4e-82, Organism=Escherichia coli, GI1787085, Length=252, Percent_Identity=38.4920634920635, Blast_Score=177, Evalue=7e-46, Organism=Escherichia coli, GI1787088, Length=251, Percent_Identity=36.2549800796813, Blast_Score=156, Evalue=1e-39, Organism=Escherichia coli, GI1788228, Length=237, Percent_Identity=31.6455696202532, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI1787031, Length=244, Percent_Identity=31.9672131147541, Blast_Score=122, Evalue=2e-29,
Paralogues:
None
Copy number: 900 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 28084; Mature: 28084
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLALCAALALAAGGAFAKEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI CCHHHHHHHHHHHHCCHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEECHHHHHHHHHHC NAKCTWTPQDLDGIIPALKAKKFDVIVSSLTVTDKRREQIDFSDKLYDAPARMIAKAGSP CCEEEECHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHCCCHHHHHHHHHHHHHHCCCC LAPSVESLKGKRVGVEQGSTQETFAKAHWEPKGVTIVSYQNQDQVYADLGSGRLDATLQD CCCCHHHHCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCCCCCHHHH ELQADYGFLRTPRGKGFAWAGPAVKDPRTLGDGTAMGLRKEDADLKDAINRALASMHKDG HHHHCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC TYDRLSRKYFPYSVYSAK CHHHHHHCCCCEEEEECC >Mature Secondary Structure MKKLALCAALALAAGGAFAKEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI CCHHHHHHHHHHHHCCHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEECHHHHHHHHHHC NAKCTWTPQDLDGIIPALKAKKFDVIVSSLTVTDKRREQIDFSDKLYDAPARMIAKAGSP CCEEEECHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHCCCHHHHHHHHHHHHHHCCCC LAPSVESLKGKRVGVEQGSTQETFAKAHWEPKGVTIVSYQNQDQVYADLGSGRLDATLQD CCCCHHHHCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCCCCCHHHH ELQADYGFLRTPRGKGFAWAGPAVKDPRTLGDGTAMGLRKEDADLKDAINRALASMHKDG HHHHCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC TYDRLSRKYFPYSVYSAK CHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-ornithine [Periplasm]; H2O; ATP; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [Periplasm] + H2O = ADP + phosphate + L-lysine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 3040734; 9298646 [H]