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The map label for this gene is omp32 [H]

Identifier: 53718669

GI number: 53718669

Start: 1198437

End: 1199537

Strand: Reverse

Name: omp32 [H]

Synonym: BPSL1029

Alternate gene names: 53718669

Gene position: 1199537-1198437 (Counterclockwise)

Preceding gene: 53718670

Following gene: 53718668

Centisome position: 29.44

GC content: 65.21

Gene sequence:

>1101_bases
ATGGAGGAGATGATGAAGAAAGTTATGCTCGCGGCGGTACTGGCGACTGCCGGAGTGGCGGCTCACGCTCAAAGCAGCGT
GACGCTGTACGGCCGTCTGGACGCCGGCATCGAATACATGAACGGCCTGCCGAGCGCGAACGGCGGCAGCACGAGCCGCT
GGCGCGCGGAAAGCGGCAACTGGGGCACGAGCCTCTGGGGCTTGAAGGGCTCCGAGGACATCGGCGGCGGCAACAAGATC
GTGTTCCAGTTGGAAGGCAGCTTCGACACGATGAACGGCAACGGCCCGGGCGCCGGCAGCATCTGGAACCGCTGGGCAAC
GATCGGCATCTCCAACGACACGTACGGTACCCTGCTGCTCGGCCGCGAGCTCGCGATCGCGAACGGCGTGTGGGACTTCG
ATCCGTTCGGCCAGTCGTCGTGGTCGACGGCTTCGCTCGTGCGCGGGCGCAACTGGAACAAGACCAGCAACAACATTTCG
TATCAATCGCCGAAGTTCTACGGCTTCGACGTCTACGGCCAATACGCGCTGTCGAACGCGACGAACTGGAACGGCAACGG
CTCGACGAGCCAGGGCCGCAGCGCGGGCCTGCAGCTCACCTACACGACCTCGCTGTTCCAGATCCGCGGCCTCTATGACG
AAGCGCGCGATCCGGCGAACGGCAAGCTCGACGACGTGTTCAACTACTCGCGCGAATATTTCGCCGGCGTGAACGTGTTC
CTCGGCCAGTTCAAGCTGCAGGCGGCATACCAGGCGTCGCACGCGGACGGCGGCCCGGTCGTGAACAACGGCATCACGAC
GACCCAGCAGGTCTGGGGCGGCGTGACGTGGCAGGCAACGCCCGCCGCCGCGCTGATCGCGGCCGTCTATCACGTGAACG
CGAATCACGGCGGCGGCAACGCGAACATCTTCACGGTCGGCGGCTCGTACAACCTGTCGAAGCGCACGCTGCTCGACGTG
CAGGTCGCGACGGTGCGCAACAGCAAGACCGCGAACTTCGGCCTGAACGCGAACCCGGCCGGCACCGACATCTCGACCGG
CAATCCGAAGTTCGGCGGCAGCCAGACGGGCGTGTACGCCGGCATCCAGCACTTGTTCTGA

Upstream 100 bases:

>100_bases
CGCCGAACCGGCTGCACGCGGTCTCTCTGGTTACCCCAATTTTGCCCGACGCATGCGGCCGGGCATCTTGCGCAGTTCTG
GGTTGACTTTTTGACAGGGT

Downstream 100 bases:

>100_bases
TCACGCAAGCCGGATCGTTTGAACCGATAGTCTTTTCACGCTGCTGCGAGAGGCGCGTACCGGTGCGATACCTCACGGTA
TCGCACCGTTTTTTTATGGT

Product: putative exported outer membrane porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MEEMMKKVMLAAVLATAGVAAHAQSSVTLYGRLDAGIEYMNGLPSANGGSTSRWRAESGNWGTSLWGLKGSEDIGGGNKI
VFQLEGSFDTMNGNGPGAGSIWNRWATIGISNDTYGTLLLGRELAIANGVWDFDPFGQSSWSTASLVRGRNWNKTSNNIS
YQSPKFYGFDVYGQYALSNATNWNGNGSTSQGRSAGLQLTYTTSLFQIRGLYDEARDPANGKLDDVFNYSREYFAGVNVF
LGQFKLQAAYQASHADGGPVVNNGITTTQQVWGGVTWQATPAAALIAAVYHVNANHGGGNANIFTVGGSYNLSKRTLLDV
QVATVRNSKTANFGLNANPAGTDISTGNPKFGGSQTGVYAGIQHLF

Sequences:

>Translated_366_residues
MEEMMKKVMLAAVLATAGVAAHAQSSVTLYGRLDAGIEYMNGLPSANGGSTSRWRAESGNWGTSLWGLKGSEDIGGGNKI
VFQLEGSFDTMNGNGPGAGSIWNRWATIGISNDTYGTLLLGRELAIANGVWDFDPFGQSSWSTASLVRGRNWNKTSNNIS
YQSPKFYGFDVYGQYALSNATNWNGNGSTSQGRSAGLQLTYTTSLFQIRGLYDEARDPANGKLDDVFNYSREYFAGVNVF
LGQFKLQAAYQASHADGGPVVNNGITTTQQVWGGVTWQATPAAALIAAVYHVNANHGGGNANIFTVGGSYNLSKRTLLDV
QVATVRNSKTANFGLNANPAGTDISTGNPKFGGSQTGVYAGIQHLF
>Mature_366_residues
MEEMMKKVMLAAVLATAGVAAHAQSSVTLYGRLDAGIEYMNGLPSANGGSTSRWRAESGNWGTSLWGLKGSEDIGGGNKI
VFQLEGSFDTMNGNGPGAGSIWNRWATIGISNDTYGTLLLGRELAIANGVWDFDPFGQSSWSTASLVRGRNWNKTSNNIS
YQSPKFYGFDVYGQYALSNATNWNGNGSTSQGRSAGLQLTYTTSLFQIRGLYDEARDPANGKLDDVFNYSREYFAGVNVF
LGQFKLQAAYQASHADGGPVVNNGITTTQQVWGGVTWQATPAAALIAAVYHVNANHGGGNANIFTVGGSYNLSKRTLLDV
QVATVRNSKTANFGLNANPAGTDISTGNPKFGGSQTGVYAGIQHLF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38885; Mature: 38885

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEMMKKVMLAAVLATAGVAAHAQSSVTLYGRLDAGIEYMNGLPSANGGSTSRWRAESGN
CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCEEECCCCC
WGTSLWGLKGSEDIGGGNKIVFQLEGSFDTMNGNGPGAGSIWNRWATIGISNDTYGTLLL
CCCEEECCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCHHHCEEEEEECCCCCEEEEE
GRELAIANGVWDFDPFGQSSWSTASLVRGRNWNKTSNNISYQSPKFYGFDVYGQYALSNA
ECEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCC
TNWNGNGSTSQGRSAGLQLTYTTSLFQIRGLYDEARDPANGKLDDVFNYSREYFAGVNVF
CCCCCCCCCCCCCCCCEEEEEEEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
LGQFKLQAAYQASHADGGPVVNNGITTTQQVWGGVTWQATPAAALIAAVYHVNANHGGGN
HHHEEEEEHHHCCCCCCCCEECCCCCHHHHHHCCCEECCCHHHHHHHHHEEEECCCCCCC
ANIFTVGGSYNLSKRTLLDVQVATVRNSKTANFGLNANPAGTDISTGNPKFGGSQTGVYA
EEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
GIQHLF
HHHHCC
>Mature Secondary Structure
MEEMMKKVMLAAVLATAGVAAHAQSSVTLYGRLDAGIEYMNGLPSANGGSTSRWRAESGN
CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCEEECCCCC
WGTSLWGLKGSEDIGGGNKIVFQLEGSFDTMNGNGPGAGSIWNRWATIGISNDTYGTLLL
CCCEEECCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCHHHCEEEEEECCCCCEEEEE
GRELAIANGVWDFDPFGQSSWSTASLVRGRNWNKTSNNISYQSPKFYGFDVYGQYALSNA
ECEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCC
TNWNGNGSTSQGRSAGLQLTYTTSLFQIRGLYDEARDPANGKLDDVFNYSREYFAGVNVF
CCCCCCCCCCCCCCCCEEEEEEEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
LGQFKLQAAYQASHADGGPVVNNGITTTQQVWGGVTWQATPAAALIAAVYHVNANHGGGN
HHHEEEEEHHHCCCCCCCCEECCCCCHHHHHHCCCEECCCHHHHHHHHHEEEECCCCCCC
ANIFTVGGSYNLSKRTLLDVQVATVRNSKTANFGLNANPAGTDISTGNPKFGGSQTGVYA
EEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
GIQHLF
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]