| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is 53718615
Identifier: 53718615
GI number: 53718615
Start: 1131677
End: 1132138
Strand: Reverse
Name: 53718615
Synonym: BPSL0973
Alternate gene names: NA
Gene position: 1132138-1131677 (Counterclockwise)
Preceding gene: 53718616
Following gene: 53718614
Centisome position: 27.79
GC content: 66.45
Gene sequence:
>462_bases ATGCGCTACTGGCTGATGAAATCCGAACCGGACGAGGCAAGCATCGACGACCTCGCCGCCGCCCCCGACCAGACCTTGCC GTGGACCGGCGTGCGCAACTATCAGGCGCGCAACTTCATGCGCGACACGATGCAGATCGGCGACGGCGTGCTGTTCTACC ATTCGAGCTGCCCCGAACCCGGTATCGCCGGGCTCGCGCGAGTCTCGTCGACGCCCTACCCCGACCCCACGCAGTTCGAT TCGCGCAGTCCGTACCACGATCCGAAGTCGACGCGGGAAGCGCCGCGCTGGGTACTCGTCGACGTGCGCTTCGTCAGGAA ATCGCCGCTCGTTCCCCTCGCCGCGCTGCGCGAGCACGAGGCGCTCGCGAACATGCGCGTGCTCGCGAAGGGCAACCGGC TGTCGATCACGCCCGTCACGCCAAACGAGTGGCGCTTCATCACGCAGCGCCTGATGAAGTGA
Upstream 100 bases:
>100_bases GCCTAGCGGCTAAGGCGGGGGCCTATTCGACGGCATCGGGCAAGTCCCGATGCCGTTTCCTTTTGTGCAGCCTTTTCATT GCGTCGAGTCATTCCGATCC
Downstream 100 bases:
>100_bases CGCGGCCCGCCACGTCAAACATTGTCAGAGCCGGCGCGGCAAGCCGCGTCGGCCGGAACCTCCGCCCGCTTTCGGCGGCC TAACGGGCGCTCGACGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MRYWLMKSEPDEASIDDLAAAPDQTLPWTGVRNYQARNFMRDTMQIGDGVLFYHSSCPEPGIAGLARVSSTPYPDPTQFD SRSPYHDPKSTREAPRWVLVDVRFVRKSPLVPLAALREHEALANMRVLAKGNRLSITPVTPNEWRFITQRLMK
Sequences:
>Translated_153_residues MRYWLMKSEPDEASIDDLAAAPDQTLPWTGVRNYQARNFMRDTMQIGDGVLFYHSSCPEPGIAGLARVSSTPYPDPTQFD SRSPYHDPKSTREAPRWVLVDVRFVRKSPLVPLAALREHEALANMRVLAKGNRLSITPVTPNEWRFITQRLMK >Mature_153_residues MRYWLMKSEPDEASIDDLAAAPDQTLPWTGVRNYQARNFMRDTMQIGDGVLFYHSSCPEPGIAGLARVSSTPYPDPTQFD SRSPYHDPKSTREAPRWVLVDVRFVRKSPLVPLAALREHEALANMRVLAKGNRLSITPVTPNEWRFITQRLMK
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI83267861, Length=163, Percent_Identity=47.8527607361963, Blast_Score=148, Evalue=2e-36, Organism=Homo sapiens, GI40806221, Length=163, Percent_Identity=47.8527607361963, Blast_Score=148, Evalue=2e-36, Organism=Homo sapiens, GI7661804, Length=163, Percent_Identity=47.8527607361963, Blast_Score=148, Evalue=2e-36, Organism=Homo sapiens, GI83267859, Length=106, Percent_Identity=50, Blast_Score=119, Evalue=1e-27, Organism=Homo sapiens, GI40806219, Length=106, Percent_Identity=50, Blast_Score=119, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17485; Mature: 17485
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYWLMKSEPDEASIDDLAAAPDQTLPWTGVRNYQARNFMRDTMQIGDGVLFYHSSCPEP CEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCC GIAGLARVSSTPYPDPTQFDSRSPYHDPKSTREAPRWVLVDVRFVRKSPLVPLAALREHE CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHH ALANMRVLAKGNRLSITPVTPNEWRFITQRLMK HHHHHHEEECCCEEEEEECCCCHHHHHHHHHCC >Mature Secondary Structure MRYWLMKSEPDEASIDDLAAAPDQTLPWTGVRNYQARNFMRDTMQIGDGVLFYHSSCPEP CEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCC GIAGLARVSSTPYPDPTQFDSRSPYHDPKSTREAPRWVLVDVRFVRKSPLVPLAALREHE CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHH ALANMRVLAKGNRLSITPVTPNEWRFITQRLMK HHHHHHEEECCCEEEEEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA