Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is 53718534

Identifier: 53718534

GI number: 53718534

Start: 1042163

End: 1042672

Strand: Reverse

Name: 53718534

Synonym: BPSL0894

Alternate gene names: NA

Gene position: 1042672-1042163 (Counterclockwise)

Preceding gene: 53718535

Following gene: 53718533

Centisome position: 25.59

GC content: 67.06

Gene sequence:

>510_bases
GTGCGATCTTCCCCGCGCTCTTCGCTCGCCCGACTCGCGCGAGCCGCCGTCTTTCCGGTCGCGCTCGCGCTCGCCGCGAG
CGGCATGCACGCCGCGTTCGCGCAAACCACGCCGCTGCCGCCCGGCGCGAAGCAACCGAGCGAATTCCCGCGCGTGAAGC
TGCGCGCCGGCATGTACGTGATCGACGCGGCCGTCGCGGCGAACGACGCCGACCGCGAACAGGGCCTCATGTACCGCTCG
CGGCTCGCGCCGAACGAAGGGATGCTGTTCGTGTTCAACGAGAACGCCGTGCATTGCTTCTGGATGAAAAACACGCTGAT
CCCGCTGTCGATCGCGTTCATCCGCGCGGACGGCACGATCACCGACATCGACGAAATGAAGGCCGAGACGACCGACAATC
ACTGCCCGCGCAACAACGGCGTCTATGCGCTCGAGATGAGCAGCGGCTGGTTCGCCGCGAAGGGCGTGAAGCCCGGCATG
AAGATCGACGGGCTGCCGAAGCCGCAGTGA

Upstream 100 bases:

>100_bases
TTTTTGCCGCCCTCGCCCGCCCGAGCCCGCGCCCTGCCTGCGCGCGACGCCGCGCTTCGCGTACCATGCGGGTCTCGCAT
TCCCGATAGGAGCCCCAGCC

Downstream 100 bases:

>100_bases
CGCCCGGTGCGCGCGGCCGGCGCATGCCGCGCGTGCCCCGCGCCCTTGCCGCCCGAGCGCCGGCCGCGCGCCGGCTTTTT
TGCGCGCCGCTGCCGTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide Protein; Lipoprotein; Secreted Protein

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MRSSPRSSLARLARAAVFPVALALAASGMHAAFAQTTPLPPGAKQPSEFPRVKLRAGMYVIDAAVAANDADREQGLMYRS
RLAPNEGMLFVFNENAVHCFWMKNTLIPLSIAFIRADGTITDIDEMKAETTDNHCPRNNGVYALEMSSGWFAAKGVKPGM
KIDGLPKPQ

Sequences:

>Translated_169_residues
MRSSPRSSLARLARAAVFPVALALAASGMHAAFAQTTPLPPGAKQPSEFPRVKLRAGMYVIDAAVAANDADREQGLMYRS
RLAPNEGMLFVFNENAVHCFWMKNTLIPLSIAFIRADGTITDIDEMKAETTDNHCPRNNGVYALEMSSGWFAAKGVKPGM
KIDGLPKPQ
>Mature_169_residues
MRSSPRSSLARLARAAVFPVALALAASGMHAAFAQTTPLPPGAKQPSEFPRVKLRAGMYVIDAAVAANDADREQGLMYRS
RLAPNEGMLFVFNENAVHCFWMKNTLIPLSIAFIRADGTITDIDEMKAETTDNHCPRNNGVYALEMSSGWFAAKGVKPGM
KIDGLPKPQ

Specific function: Unknown

COG id: COG1430

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18321; Mature: 18321

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSPRSSLARLARAAVFPVALALAASGMHAAFAQTTPLPPGAKQPSEFPRVKLRAGMYV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCEEEEECCEEE
IDAAVAANDADREQGLMYRSRLAPNEGMLFVFNENAVHCFWMKNTLIPLSIAFIRADGTI
EEEEHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEECCCCE
TDIDEMKAETTDNHCPRNNGVYALEMSSGWFAAKGVKPGMKIDGLPKPQ
ECHHHHHCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRSSPRSSLARLARAAVFPVALALAASGMHAAFAQTTPLPPGAKQPSEFPRVKLRAGMYV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCEEEEECCEEE
IDAAVAANDADREQGLMYRSRLAPNEGMLFVFNENAVHCFWMKNTLIPLSIAFIRADGTI
EEEEHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEECCCCE
TDIDEMKAETTDNHCPRNNGVYALEMSSGWFAAKGVKPGMKIDGLPKPQ
ECHHHHHCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA