| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718532
Identifier: 53718532
GI number: 53718532
Start: 1036989
End: 1038575
Strand: Reverse
Name: 53718532
Synonym: BPSL0892a
Alternate gene names: NA
Gene position: 1038575-1036989 (Counterclockwise)
Preceding gene: 53718533
Following gene: 53718530
Centisome position: 25.49
GC content: 73.09
Gene sequence:
>1587_bases ATGGACAAGACGAAACAACCGCCTCGCGCGGCGAAGAGATGCTGTCGCGCGACCTTGCTGGCCGCCGCCGCATTCGCGTG CTGCTGCGGCTCGTATGCCGCCGCGCAGGAAGCCGCGTCTGCCGCGCCGAGCACGACGACGCAACCGCGCGACGAAGCGC CGTTATCCGCGCCGTTGCAAGTCGTGCAGGACGCGATATCGGCCGGCACGGCCGACGTATCGGCCAATGCATCGGCCGAT GCGGACGTCGCGATGCCGCTCGCGGAAGTCGCGCCGCCCTGCTCCGCCCCGGGCGCGTGCGGCGCCGAGCTGCGCCTCGC CGGCGGCATGGGGGGGAATGGCGAGGGCGCAGGCGCGGGCGGAATCGGAAGCGGCGGCGACAACGCGGGCAGCGGCCGCG GAAGCAGCGGCGGCGCAAACGACGGGAATGGTGCCGTCGGCGCTGCGGGGATCGGCGTCGGTGGGACAACAGGCTCGACC GCGGGCGGCACGGCGGCCACCGGACGCGGCAACTCGGTAGGCAACGCATCGGGCGGCGGAACGTCGGGGGGTGGTGCGTC AGGCCATGGCACTTCGGGGCGCGGTGCTGCGGGAGGCGGCGCTTCCAGTGGCGGGGCTTCGGGTGGCGGTACTTCCGGCG GCGGTGCTTCCGGCGGCGGTGCTTCAGGCGGCGGCACTTCGGGCGGCGGCGCTTCCGGTGGCGGCGCTTCCGGTGGCGGT GCTTCCGGTGGCGGTGCTTCCGGTGGCGGTGCTTCCGGTGGCGGTGCTTCCGGTGGCGGTGCTTCCGGCAGCGGTGCTTC AGGCAGCGGTGCTTCAGGCGGCGGTACTTCCGGTGGCGGTGCTTCCGGTGGCGGTACTTCCGGTGGCGGTGCTTCCGGTG GCGGTACTTCCGGTGGCGGGACTTCGGGCGGCGGTACTTCCGGTGGCGGGACTTCGGGCGGCGGTACTTCCGGTGGCGGG ACTTCGGGCGGCGGTACTTCCGGTGGCGGGACTTCGGGTGGCGGTGCTTCCGGTGGCGGTGCTTCCGGTGGCGGTGCTTC CGGTGGCGGTACTTCGGGCGGCGGTACTTCCGGCGGCGGTACTTCCGGTGGCGGGACTTCGGGTGGCGGTACTTCAGGCG GCGGTACTTCGAGTGGTGCGGGCCATGGTGGACATGGCGGTGGAACCGGTGGCGGCGGCGGCCATAGCGGTGGTCACGGT AACGGCAATGGCGGCGGCGCCAGTGGCGGCAGCGGCAGCGGCAACGGTCACGGCAGCGGCAATGGTGGCGGCAACGGCAA CGGCGGTGGCGGTGGCAACGGCGGTGGTAGCGGCAACGGCACCGGCAATGGCGGCAACAACGGCGGTGGTCACGGTAACG GCAGCAGCGGTGGCGGGACCAGCGGCGGCAACGGTCACGGTAACGGCGGCGGCACCAGCAGCGGTAGCGGCAATGGAGGC GGCAACGGCAACGGTAGCGGCCATGGCAACGGCGGCGGACACGGAAACGGCAACGGTAGCGGCGGCGCCGGCAATGGTGG AGCCAACGGCGTGGGCAGCGGCAACGGCGGCCACGGCAATGGCGGCGGGCACGGAAACGGCCGTTGA
Upstream 100 bases:
>100_bases AGACGATCGGCAATTGGCAGGGCAACGCATTTTTCGGGCCCCCGCAACACGCGCAAAAGGCCGCACGGCGATGCGGACTT CGCGCTTTGGGAGGCCGATG
Downstream 100 bases:
>100_bases TCCTTCCCGTGCGCGGCCTAGCCACGCCCGGAGCATCTCGGCCGCGCCCCGGCTACGCAACGCACGAAAGCGCGCATCGC ACCGCGCGCGTTCGCCATCC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MDKTKQPPRAAKRCCRATLLAAAAFACCCGSYAAAQEAASAAPSTTTQPRDEAPLSAPLQVVQDAISAGTADVSANASAD ADVAMPLAEVAPPCSAPGACGAELRLAGGMGGNGEGAGAGGIGSGGDNAGSGRGSSGGANDGNGAVGAAGIGVGGTTGST AGGTAATGRGNSVGNASGGGTSGGGASGHGTSGRGAAGGGASSGGASGGGTSGGGASGGGASGGGTSGGGASGGGASGGG ASGGGASGGGASGGGASGGGASGSGASGSGASGGGTSGGGASGGGTSGGGASGGGTSGGGTSGGGTSGGGTSGGGTSGGG TSGGGTSGGGTSGGGASGGGASGGGASGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSSGAGHGGHGGGTGGGGGHSGGHG NGNGGGASGGSGSGNGHGSGNGGGNGNGGGGGNGGGSGNGTGNGGNNGGGHGNGSSGGGTSGGNGHGNGGGTSSGSGNGG GNGNGSGHGNGGGHGNGNGSGGAGNGGANGVGSGNGGHGNGGGHGNGR
Sequences:
>Translated_528_residues MDKTKQPPRAAKRCCRATLLAAAAFACCCGSYAAAQEAASAAPSTTTQPRDEAPLSAPLQVVQDAISAGTADVSANASAD ADVAMPLAEVAPPCSAPGACGAELRLAGGMGGNGEGAGAGGIGSGGDNAGSGRGSSGGANDGNGAVGAAGIGVGGTTGST AGGTAATGRGNSVGNASGGGTSGGGASGHGTSGRGAAGGGASSGGASGGGTSGGGASGGGASGGGTSGGGASGGGASGGG ASGGGASGGGASGGGASGGGASGSGASGSGASGGGTSGGGASGGGTSGGGASGGGTSGGGTSGGGTSGGGTSGGGTSGGG TSGGGTSGGGTSGGGASGGGASGGGASGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSSGAGHGGHGGGTGGGGGHSGGHG NGNGGGASGGSGSGNGHGSGNGGGNGNGGGGGNGGGSGNGTGNGGNNGGGHGNGSSGGGTSGGNGHGNGGGTSSGSGNGG GNGNGSGHGNGGGHGNGNGSGGAGNGGANGVGSGNGGHGNGGGHGNGR >Mature_528_residues MDKTKQPPRAAKRCCRATLLAAAAFACCCGSYAAAQEAASAAPSTTTQPRDEAPLSAPLQVVQDAISAGTADVSANASAD ADVAMPLAEVAPPCSAPGACGAELRLAGGMGGNGEGAGAGGIGSGGDNAGSGRGSSGGANDGNGAVGAAGIGVGGTTGST AGGTAATGRGNSVGNASGGGTSGGGASGHGTSGRGAAGGGASSGGASGGGTSGGGASGGGASGGGTSGGGASGGGASGGG ASGGGASGGGASGGGASGGGASGSGASGSGASGGGTSGGGASGGGTSGGGASGGGTSGGGTSGGGTSGGGTSGGGTSGGG TSGGGTSGGGTSGGGASGGGASGGGASGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSSGAGHGGHGGGTGGGGGHSGGHG NGNGGGASGGSGSGNGHGSGNGGGNGNGGGGGNGGGSGNGTGNGGNNGGGHGNGSSGGGTSGGNGHGNGGGTSSGSGNGG GNGNGSGHGNGGGHGNGNGSGGAGNGGANGVGSGNGGHGNGGGHGNGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41970; Mature: 41970
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKTKQPPRAAKRCCRATLLAAAAFACCCGSYAAAQEAASAAPSTTTQPRDEAPLSAPLQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH VVQDAISAGTADVSANASADADVAMPLAEVAPPCSAPGACGAELRLAGGMGGNGEGAGAG HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCC GIGSGGDNAGSGRGSSGGANDGNGAVGAAGIGVGGTTGSTAGGTAATGRGNSVGNASGGG CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TSGGGASGHGTSGRGAAGGGASSGGASGGGTSGGGASGGGASGGGTSGGGASGGGASGGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASGGGASGGGASGGGASGGGASGSGASGSGASGGGTSGGGASGGGTSGGGASGGGTSGGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGASGGGASGGGASGGGTSGGGTSGGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TSGGGTSGGGTSGGGTSSGAGHGGHGGGTGGGGGHSGGHGNGNGGGASGGSGSGNGHGSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NGGGNGNGGGGGNGGGSGNGTGNGGNNGGGHGNGSSGGGTSGGNGHGNGGGTSSGSGNGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GNGNGSGHGNGGGHGNGNGSGGAGNGGANGVGSGNGGHGNGGGHGNGR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDKTKQPPRAAKRCCRATLLAAAAFACCCGSYAAAQEAASAAPSTTTQPRDEAPLSAPLQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH VVQDAISAGTADVSANASADADVAMPLAEVAPPCSAPGACGAELRLAGGMGGNGEGAGAG HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCC GIGSGGDNAGSGRGSSGGANDGNGAVGAAGIGVGGTTGSTAGGTAATGRGNSVGNASGGG CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TSGGGASGHGTSGRGAAGGGASSGGASGGGTSGGGASGGGASGGGTSGGGASGGGASGGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASGGGASGGGASGGGASGGGASGSGASGSGASGGGTSGGGASGGGTSGGGASGGGTSGGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGASGGGASGGGASGGGTSGGGTSGGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TSGGGTSGGGTSGGGTSSGAGHGGHGGGTGGGGGHSGGHGNGNGGGASGGSGSGNGHGSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NGGGNGNGGGGGNGGGSGNGTGNGGNNGGGHGNGSSGGGTSGGNGHGNGGGTSSGSGNGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GNGNGSGHGNGGGHGNGNGSGGAGNGGANGVGSGNGGHGNGGGHGNGR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA