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The map label for this gene is yjcC [C]

Identifier: 53718526

GI number: 53718526

Start: 1028626

End: 1029900

Strand: Reverse

Name: yjcC [C]

Synonym: BPSL0887

Alternate gene names: 53718526

Gene position: 1029900-1028626 (Counterclockwise)

Preceding gene: 53718527

Following gene: 53718522

Centisome position: 25.28

GC content: 69.18

Gene sequence:

>1275_bases
ATGAGCATGATCGACATCGATCCTCCCAGCTTCCAGTCGCCGCGCCCGATCGCGGGCGACGACGGCAACCGGCGCACCGT
GCTGTATGGCGACTACACCGTGTTCAGCGTGTTCCAGCCGGTCTTCTCGGTGTCGCATCGCCGTGCGATCGGCTATCACG
CGTCGCTGCGCGCGCACGATTCGCAGGGCAACCAGGTGCCCTCGCACGAGGTGTTCACGCAGGCCGCGCGCCGCGGCGAT
CTGCTCGAACTCGGCCGCCTCGCCGAATCGCTGCACCTGGGCAACTTCCACACGTTCGACAGTCACGACGAATGGCTCTT
CCTGAGCCTGCATCCCGCCGCGCTGATGGACACCGTCTACGGCGACGCGCTCCTCGCGAACCTGAAGGCACTCGGGCTGC
CGCCGCAGCGCGTCGTGCTCGAAGTGCCCGAGCAGGCGGGCGGCGAGACGCCGCGCTTCGCGGCGATCGTCGACGGCCTG
CGCAAGGCGGGTTTCCTGATCGCGCTCGGCGGCTTCGGCGCGAAGCACTCGAACATCGATCGCGTCTGGCACCTGCACCC
GGACATCGTCACGCTCGATCGCGGCATCCTCGCGCAGGCAAGCGAGCATTCGCATCTCGAGCGCGTGCTGCCCGGCCTCG
TGTCGCTGCTGCACGAGTCGGGGCAGCTCGTGCTGATGGGCGGCATCACGACCGAGCGCGAAGCGCTGATCGCGCTCGAA
TGCGACGTCGATTTCGTACAAGGGCAATACTTCGCCGGGCCGAGCGTCGAGCCGGTGCAGCCGCAGGCCGCGGCGGGCGT
CATGGATACGCTGTCGGCCGCGCTTCGGCTGCGCGTCGCCGAGCGCACGCGCGCGCAGCAAGCGCGCCTCGCGCCGTACG
TCGCCGCGCTGCTGCAGGCGAGCGCGCTGCTGCGCGAAGGCCGTGACCTCACCGAAGCGTCGAAGGAACTGCTCGAGCTG
CCCGAGGCGGCGCGCTGCTTCCTGCTCGACGCGTCGGGCCGTCAGATCGGCGACAACGTGCTGCCGCGCGTGCATGCATC
GCAGCGCGCGAAACGCTTCAGCCCGCTGCTGCACTCGGAAGGCGCGAGCTGGGAACGCCGGCCGTACTTCATCGAGGCGA
TGCGCGTGCCGGGGCGCGCGCATTTCACGCCACCCTATCTGTCGATCAATGAAGCGCACCTGTGCGTGACGGCGTCGATC
GCGACGCCCGCGGTGCAAGGCATGCAGGTGCTCTGCGTCGACATCAACTGGGAAGCCGCCGCGCACCGCGACTGA

Upstream 100 bases:

>100_bases
GCGCCGCGCGCGCAGCCGCGGCGTGCTGCCGCAGCTTTTTGCGCACGTTTCTTGCTCGCCTATTCTGTAGGTAAACTGAC
GGTTCCCAAGCAGCCGAATC

Downstream 100 bases:

>100_bases
ATCCCGTTCGCCGCCGCGGCGGCCCAGGCCGCCATACGCAACGCACGGGCATCCGCGGCCCGTTGGTCGTTGGTCGTCGG
CGCGGCCGGCCGTTCGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: EAL Domain-Containing Protein; Diguanylate Cyclase/Phosphodiesterase; EAL Domain Protein; Sensor Protein; Cyclic Diguanylate Phosphodiesterase Domain Protein; Signal Transduction Protein; Cyclic Diguanylate Phosphodiesterase; Signaling Protein

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MSMIDIDPPSFQSPRPIAGDDGNRRTVLYGDYTVFSVFQPVFSVSHRRAIGYHASLRAHDSQGNQVPSHEVFTQAARRGD
LLELGRLAESLHLGNFHTFDSHDEWLFLSLHPAALMDTVYGDALLANLKALGLPPQRVVLEVPEQAGGETPRFAAIVDGL
RKAGFLIALGGFGAKHSNIDRVWHLHPDIVTLDRGILAQASEHSHLERVLPGLVSLLHESGQLVLMGGITTEREALIALE
CDVDFVQGQYFAGPSVEPVQPQAAAGVMDTLSAALRLRVAERTRAQQARLAPYVAALLQASALLREGRDLTEASKELLEL
PEAARCFLLDASGRQIGDNVLPRVHASQRAKRFSPLLHSEGASWERRPYFIEAMRVPGRAHFTPPYLSINEAHLCVTASI
ATPAVQGMQVLCVDINWEAAAHRD

Sequences:

>Translated_424_residues
MSMIDIDPPSFQSPRPIAGDDGNRRTVLYGDYTVFSVFQPVFSVSHRRAIGYHASLRAHDSQGNQVPSHEVFTQAARRGD
LLELGRLAESLHLGNFHTFDSHDEWLFLSLHPAALMDTVYGDALLANLKALGLPPQRVVLEVPEQAGGETPRFAAIVDGL
RKAGFLIALGGFGAKHSNIDRVWHLHPDIVTLDRGILAQASEHSHLERVLPGLVSLLHESGQLVLMGGITTEREALIALE
CDVDFVQGQYFAGPSVEPVQPQAAAGVMDTLSAALRLRVAERTRAQQARLAPYVAALLQASALLREGRDLTEASKELLEL
PEAARCFLLDASGRQIGDNVLPRVHASQRAKRFSPLLHSEGASWERRPYFIEAMRVPGRAHFTPPYLSINEAHLCVTASI
ATPAVQGMQVLCVDINWEAAAHRD
>Mature_423_residues
SMIDIDPPSFQSPRPIAGDDGNRRTVLYGDYTVFSVFQPVFSVSHRRAIGYHASLRAHDSQGNQVPSHEVFTQAARRGDL
LELGRLAESLHLGNFHTFDSHDEWLFLSLHPAALMDTVYGDALLANLKALGLPPQRVVLEVPEQAGGETPRFAAIVDGLR
KAGFLIALGGFGAKHSNIDRVWHLHPDIVTLDRGILAQASEHSHLERVLPGLVSLLHESGQLVLMGGITTEREALIALEC
DVDFVQGQYFAGPSVEPVQPQAAAGVMDTLSAALRLRVAERTRAQQARLAPYVAALLQASALLREGRDLTEASKELLELP
EAARCFLLDASGRQIGDNVLPRVHASQRAKRFSPLLHSEGASWERRPYFIEAMRVPGRAHFTPPYLSINEAHLCVTASIA
TPAVQGMQVLCVDINWEAAAHRD

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790496, Length=240, Percent_Identity=22.0833333333333, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46381; Mature: 46250

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMIDIDPPSFQSPRPIAGDDGNRRTVLYGDYTVFSVFQPVFSVSHRRAIGYHASLRAHD
CCEECCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCEEEEEEEEC
SQGNQVPSHEVFTQAARRGDLLELGRLAESLHLGNFHTFDSHDEWLFLSLHPAALMDTVY
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHH
GDALLANLKALGLPPQRVVLEVPEQAGGETPRFAAIVDGLRKAGFLIALGGFGAKHSNID
HHHHHHHHHHHCCCHHHHEEECCHHCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCC
RVWHLHPDIVTLDRGILAQASEHSHLERVLPGLVSLLHESGQLVLMGGITTEREALIALE
EEEEECCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEE
CDVDFVQGQYFAGPSVEPVQPQAAAGVMDTLSAALRLRVAERTRAQQARLAPYVAALLQA
CCCCEECCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SALLREGRDLTEASKELLELPEAARCFLLDASGRQIGDNVLPRVHASQRAKRFSPLLHSE
HHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHCCCCHHHHHHHHHCHHHHCC
GASWERRPYFIEAMRVPGRAHFTPPYLSINEAHLCVTASIATPAVQGMQVLCVDINWEAA
CCCCCCCCEEEEEEECCCCCCCCCCCCEECCCEEEEEECCCCCCCCCCEEEEEEECCCCC
AHRD
CCCC
>Mature Secondary Structure 
SMIDIDPPSFQSPRPIAGDDGNRRTVLYGDYTVFSVFQPVFSVSHRRAIGYHASLRAHD
CEECCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCEEEEEEEEC
SQGNQVPSHEVFTQAARRGDLLELGRLAESLHLGNFHTFDSHDEWLFLSLHPAALMDTVY
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHH
GDALLANLKALGLPPQRVVLEVPEQAGGETPRFAAIVDGLRKAGFLIALGGFGAKHSNID
HHHHHHHHHHHCCCHHHHEEECCHHCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCC
RVWHLHPDIVTLDRGILAQASEHSHLERVLPGLVSLLHESGQLVLMGGITTEREALIALE
EEEEECCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEE
CDVDFVQGQYFAGPSVEPVQPQAAAGVMDTLSAALRLRVAERTRAQQARLAPYVAALLQA
CCCCEECCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SALLREGRDLTEASKELLELPEAARCFLLDASGRQIGDNVLPRVHASQRAKRFSPLLHSE
HHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHCCCCHHHHHHHHHCHHHHCC
GASWERRPYFIEAMRVPGRAHFTPPYLSINEAHLCVTASIATPAVQGMQVLCVDINWEAA
CCCCCCCCEEEEEEECCCCCCCCCCCCEECCCEEEEEECCCCCCCCCCEEEEEEECCCCC
AHRD
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA