| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718521
Identifier: 53718521
GI number: 53718521
Start: 1023539
End: 1024744
Strand: Reverse
Name: 53718521
Synonym: BPSL0882
Alternate gene names: NA
Gene position: 1024744-1023539 (Counterclockwise)
Preceding gene: 53718522
Following gene: 53718517
Centisome position: 25.15
GC content: 74.38
Gene sequence:
>1206_bases ATGCACGCATCCCGCTTCGCCATCGGCCGCGCCTGGCCCGTCTTCGTCGCGTTCCTGCGTCTGGGCGTCACGTCGTTCGG CGGCCCGATCGCCCACCTGGGCTATTTCCGCGAAGAATTCGTCGTCCGCCGACGCTGGCTCAGCGAGCGCAGCTACGCCG ATCTCGTCGGCCTCTGCCAGTTCCTGCCCGGCCCGGCGAGCAGCCAGGTCGGCATCGCGATCGGCCTGTCGCGCGCGGGC TACGCGGGCGCGCTCGCCGCGTGGGCGGGCTTCACGCTGCCGTCCGCGATCGCGATGATCGCGTTCGCGTACGGCGTCGC CGGCGCGGCGGGCCGGGCGCTCGCGCCGGGCGCGCTGCACGGGCTGAAGATCGTGTCGGCGGCCGTCGTCGCGCAGGCCG TCTGGGGCATGGCGCGCAACCTGTGCCCCGACGCGCGGCGCGTGACGATCATGACGGCCGCGACGGGCGTCGCGCTCGTC GTGCCATCGACATGGACACAGCTCGCCGTCATCGCGGGCGCGGGCTGCATCGGGCTGCTGCACGTCGATCACGCGCGCGA CGGCGCGCACGAGCCGCTGCCGATCTCGCTCGGCCGCCGCGCCGGCGCGTGCTGCCTCACGCTGTTCGTCGCGCTGCTCG TCGGCCTGCCGCTCGCCGCGCGCGCGTCGGGCAGCCATGCGCTCGGGATCGCCGACGCGTTCTATCGCGCGGGCGCGCTC GTGTTCGGCGGCGGGCACGTCGTGCTGCCGCTGCTGCAGGCGTCGGTCGTCGCGCCCGGCTGGGTCGGCGGCCAGACGTT TCTCGCGGGCTACGGCGCCGCGCAGGCCGTGCCCGGCCCGCTCTTCACGTTCGCGGCTTTTCTCGGCGCATCGATGAAGG ACGCGCCGTCGGGCTGGCTCGGCGGCGCGCTCGCGCTCGCCGCGATCTTCGCGCCGTCGTTCCTGCTCGTCGCGGGCGCG ATCCCGTTCTGGGAACGCTGGCGAACGAACGCGCTGATGCAGGCGGCGCTCGCGGGCGTCAACGCGGCCGTCGTCGGCCT CTTGCTCGCCGCGCTCTATCAGCCGGTGTGGACGGGCGCGATCCTCGCGCCGCGCGACTTCGTCGCGGCGCTCGTCGCGT TCGTCGCGCTGACGTTCTGGCGCGTGCCGCCGTGGGGCGTGGTGATCGTCGCGGGCGTCGCGGGGTGGGTCGTCTTTTCG GTTTAA
Upstream 100 bases:
>100_bases CCGCAGCCCCCATCCGATCGGCGAATTTCCCGCAATACACGCGCGGGCCCGCTATCATCGCGCATCGCATCCCACCGCCC TCGGAAGCCGCCGTCATCGT
Downstream 100 bases:
>100_bases CGGGTTCGCGGTTTGATGGGGTTTGGGGTTTGGGGTTTGGGGTTTGGGGTTTGGCGCATTTGATGCATTTGATGCATTTG ATGCGTTTGATGCGTTTGAT
Product: putative chromate transporter protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MHASRFAIGRAWPVFVAFLRLGVTSFGGPIAHLGYFREEFVVRRRWLSERSYADLVGLCQFLPGPASSQVGIAIGLSRAG YAGALAAWAGFTLPSAIAMIAFAYGVAGAAGRALAPGALHGLKIVSAAVVAQAVWGMARNLCPDARRVTIMTAATGVALV VPSTWTQLAVIAGAGCIGLLHVDHARDGAHEPLPISLGRRAGACCLTLFVALLVGLPLAARASGSHALGIADAFYRAGAL VFGGGHVVLPLLQASVVAPGWVGGQTFLAGYGAAQAVPGPLFTFAAFLGASMKDAPSGWLGGALALAAIFAPSFLLVAGA IPFWERWRTNALMQAALAGVNAAVVGLLLAALYQPVWTGAILAPRDFVAALVAFVALTFWRVPPWGVVIVAGVAGWVVFS V
Sequences:
>Translated_401_residues MHASRFAIGRAWPVFVAFLRLGVTSFGGPIAHLGYFREEFVVRRRWLSERSYADLVGLCQFLPGPASSQVGIAIGLSRAG YAGALAAWAGFTLPSAIAMIAFAYGVAGAAGRALAPGALHGLKIVSAAVVAQAVWGMARNLCPDARRVTIMTAATGVALV VPSTWTQLAVIAGAGCIGLLHVDHARDGAHEPLPISLGRRAGACCLTLFVALLVGLPLAARASGSHALGIADAFYRAGAL VFGGGHVVLPLLQASVVAPGWVGGQTFLAGYGAAQAVPGPLFTFAAFLGASMKDAPSGWLGGALALAAIFAPSFLLVAGA IPFWERWRTNALMQAALAGVNAAVVGLLLAALYQPVWTGAILAPRDFVAALVAFVALTFWRVPPWGVVIVAGVAGWVVFS V >Mature_401_residues MHASRFAIGRAWPVFVAFLRLGVTSFGGPIAHLGYFREEFVVRRRWLSERSYADLVGLCQFLPGPASSQVGIAIGLSRAG YAGALAAWAGFTLPSAIAMIAFAYGVAGAAGRALAPGALHGLKIVSAAVVAQAVWGMARNLCPDARRVTIMTAATGVALV VPSTWTQLAVIAGAGCIGLLHVDHARDGAHEPLPISLGRRAGACCLTLFVALLVGLPLAARASGSHALGIADAFYRAGAL VFGGGHVVLPLLQASVVAPGWVGGQTFLAGYGAAQAVPGPLFTFAAFLGASMKDAPSGWLGGALALAAIFAPSFLLVAGA IPFWERWRTNALMQAALAGVNAAVVGLLLAALYQPVWTGAILAPRDFVAALVAFVALTFWRVPPWGVVIVAGVAGWVVFS V
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 41153; Mature: 41153
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHASRFAIGRAWPVFVAFLRLGVTSFGGPIAHLGYFREEFVVRRRWLSERSYADLVGLCQ CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH FLPGPASSQVGIAIGLSRAGYAGALAAWAGFTLPSAIAMIAFAYGVAGAAGRALAPGALH HCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH GLKIVSAAVVAQAVWGMARNLCPDARRVTIMTAATGVALVVPSTWTQLAVIAGAGCIGLL HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCHHHHHHHHCCCEEEEE HVDHARDGAHEPLPISLGRRAGACCLTLFVALLVGLPLAARASGSHALGIADAFYRAGAL EEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHCCEE VFGGGHVVLPLLQASVVAPGWVGGQTFLAGYGAAQAVPGPLFTFAAFLGASMKDAPSGWL EEECCHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHCCCCHHHHHHHHHCCCCCCCCCCHH GGALALAAIFAPSFLLVAGAIPFWERWRTNALMQAALAGVNAAVVGLLLAALYQPVWTGA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC ILAPRDFVAALVAFVALTFWRVPPWGVVIVAGVAGWVVFSV EECHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHEECC >Mature Secondary Structure MHASRFAIGRAWPVFVAFLRLGVTSFGGPIAHLGYFREEFVVRRRWLSERSYADLVGLCQ CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH FLPGPASSQVGIAIGLSRAGYAGALAAWAGFTLPSAIAMIAFAYGVAGAAGRALAPGALH HCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH GLKIVSAAVVAQAVWGMARNLCPDARRVTIMTAATGVALVVPSTWTQLAVIAGAGCIGLL HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCHHHHHHHHCCCEEEEE HVDHARDGAHEPLPISLGRRAGACCLTLFVALLVGLPLAARASGSHALGIADAFYRAGAL EEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHCCEE VFGGGHVVLPLLQASVVAPGWVGGQTFLAGYGAAQAVPGPLFTFAAFLGASMKDAPSGWL EEECCHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHCCCCHHHHHHHHHCCCCCCCCCCHH GGALALAAIFAPSFLLVAGAIPFWERWRTNALMQAALAGVNAAVVGLLLAALYQPVWTGA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC ILAPRDFVAALVAFVALTFWRVPPWGVVIVAGVAGWVVFSV EECHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]