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The map label for this gene is ycaR [C]

Identifier: 53718516

GI number: 53718516

Start: 1017244

End: 1017450

Strand: Reverse

Name: ycaR [C]

Synonym: BPSL0877

Alternate gene names: 53718516

Gene position: 1017450-1017244 (Counterclockwise)

Preceding gene: 53718517

Following gene: 161723207

Centisome position: 24.97

GC content: 67.63

Gene sequence:

>207_bases
GTGGACGCACGTCTGCTTGAAATCCTCGTCTGCCCGATTTGCAAGGGTCCGCTCCACTATGATCGCGGCGCGCAGGAGCT
CGTCTGCCATGCCGACAAGCTCGCGTATCCGATTCGCGACGGCATCCCCGTGATGCTCGTCGACGAAGCGCGCCAGACCG
TCGAAGGCACGCCGGTCGATCCGGCCGGCCCGGCCCGGGGCCGCTGA

Upstream 100 bases:

>100_bases
GTAAAATTGGGGACTTCGTGGCGCGACGCCCGCATCTGGGTCGTCCCGGTCGAAGCCGCGCTCGATCCCCGCCTCATCGC
TCTCGTTGTGGAGAAACTCC

Downstream 100 bases:

>100_bases
CGCCCGCGTGCTCACGGCGCTTGCGCGCCGCGCCGTCTCGCACGGCGCCGGCCTGCCTCGCGCAAGCTGGGCGCGCGCGC
CGAACCGCCGCCGCCCGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MDARLLEILVCPICKGPLHYDRGAQELVCHADKLAYPIRDGIPVMLVDEARQTVEGTPVDPAGPARGR

Sequences:

>Translated_68_residues
MDARLLEILVCPICKGPLHYDRGAQELVCHADKLAYPIRDGIPVMLVDEARQTVEGTPVDPAGPARGR
>Mature_68_residues
MDARLLEILVCPICKGPLHYDRGAQELVCHADKLAYPIRDGIPVMLVDEARQTVEGTPVDPAGPARGR

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family

Homologues:

Organism=Escherichia coli, GI1787146, Length=51, Percent_Identity=60.7843137254902, Blast_Score=72, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1082_BURP1 (Q3JVA9)

Other databases:

- EMBL:   CP000124
- RefSeq:   YP_332494.1
- ProteinModelPortal:   Q3JVA9
- SMR:   Q3JVA9
- STRING:   Q3JVA9
- GeneID:   3689743
- GenomeReviews:   CP000124_GR
- KEGG:   bpm:BURPS1710b_1082
- TIGR:   BURPS1710b_1082
- eggNOG:   COG2835
- HOGENOM:   HBG713593
- OMA:   NELVSEK
- ProtClustDB:   CLSK897353
- BioCyc:   BPSE320372:BURPS1710B_A1140-MONOMER
- HAMAP:   MF_01187
- InterPro:   IPR005651

Pfam domain/function: PF03966 Trm112p

EC number: NA

Molecular weight: Translated: 7409; Mature: 7409

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDARLLEILVCPICKGPLHYDRGAQELVCHADKLAYPIRDGIPVMLVDEARQTVEGTPVD
CCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHCCCCCCC
PAGPARGR
CCCCCCCC
>Mature Secondary Structure
MDARLLEILVCPICKGPLHYDRGAQELVCHADKLAYPIRDGIPVMLVDEARQTVEGTPVD
CCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHCCCCCCC
PAGPARGR
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA