| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718491
Identifier: 53718491
GI number: 53718491
Start: 990788
End: 991951
Strand: Reverse
Name: 53718491
Synonym: BPSL0852
Alternate gene names: NA
Gene position: 991951-990788 (Counterclockwise)
Preceding gene: 53718492
Following gene: 53718489
Centisome position: 24.35
GC content: 73.02
Gene sequence:
>1164_bases ATGGCCGGGACCGTGGGCGACGCGAATGACGCGGGCGACCGCGCCGATCCTGCCGATTCTGCCGATCCCGGCGTTCCCGA CGACCCAGCCGATCCCGACGATCCGCCCGAACCCGCCGCGACACCCGCGCTCCCCGGCTTCGACGCGCCGCCTGCCGCCG CGCCGAAGAAACGCACGCGCCGGCGCGGCGTCGCGCCCGCCGCGATCGCGGACGATGTCGCCGCCGCCGCACGCGAATTG CCGCCGCACGTGCGGCTCGGCACGTCGTCGTGGTATTTCCCCGGCTGGAAAGACATCGTCTACGGCGACGACTACGCCCA ATCGAAGCTGTCGCGCGAAGGCCTCGAAGCGTACGCCGCGCATCCGCTGCTCAAGAGCGTGAGCCTCGACCGCTCGTTCT ACGCGCCGCTCACCGTCGCCAACTATCTGCGCTACGCGCAGCAGGTGCCGGACGACTTCCGCTTCGTCGTCAAGGCGCCC GCGCTCGTCACCGACGCGGTGCTGCGCGGCGCGCGCGGCGAGCCGAGCGGCCCGAACCCGGCGTTCCTGAACGCGCAGCT CGCCGCCGACGAATTCGTGCGGCCGTGCCTCGAAGGGCTCGGCAACAAGGCGGGGGCGCTCGTCTTCCAGTTCCCGCCGC TGCCCGACACGCTGCTGGCCGACCCCGCCGCGCTCGTCGATCGCCTGAGCACGTTCCTCGGCGCGCTGCCCGCGCTGCCG GCGGCTCCCGACGGCCCGCGCTACGCGGTCGAGATCCGCGACGCGAGCCTGCTCACCCCGCGCTTCATCCGCGCGCTCGC GGCGGCGGGCGTGCGCTACTGCGTCGGGCTGCACGCGAAGATGCCGGACCCGCTGCGCCAGGCGGCGGCGCTCGCGCTCC TCGACGGCGAGCCGTCGGGCCCGCTGATCGTCCGCTGGAGCCTGCACGGCGGCTTCAAGTACGAGCAGGCGAAAGCGAAA TACGAGCCGTTCGACCGGCTCGTCGACGAGGACCCGCATACCCGCACGGCGCTCGCGGAGCTCGCGGCGCGCTACGTGCT TGCCGGCCAGCCGGTGCTCATCACGGTGAACAACAAGGCGGAAGGATCGGCGCCGCTATCGTGCATCGCGCTCGCGAAGG AAATCGCGGCCGCGTGCGTGCGCTGGCGCGGCGAGGCGGCATAA
Upstream 100 bases:
>100_bases CACGAACGCTCCCGCGCACGGCGAGGACGGCGAGGCCGATGCCCGCGACAGCACCCGCGCGAAACCCGCAACCGCAGCCC TACCCACGCCCGACTCCGGC
Downstream 100 bases:
>100_bases CGCGCGCGGCCCGCGACGCTTCGCCGGCGCCTGTTCGCGGCCGCGCCGCTGCCGCCGACAGCGCGAAAAGCCGACGCCCG CTCGCGCCGCACGCCGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MAGTVGDANDAGDRADPADSADPGVPDDPADPDDPPEPAATPALPGFDAPPAAAPKKRTRRRGVAPAAIADDVAAAAREL PPHVRLGTSSWYFPGWKDIVYGDDYAQSKLSREGLEAYAAHPLLKSVSLDRSFYAPLTVANYLRYAQQVPDDFRFVVKAP ALVTDAVLRGARGEPSGPNPAFLNAQLAADEFVRPCLEGLGNKAGALVFQFPPLPDTLLADPAALVDRLSTFLGALPALP AAPDGPRYAVEIRDASLLTPRFIRALAAAGVRYCVGLHAKMPDPLRQAAALALLDGEPSGPLIVRWSLHGGFKYEQAKAK YEPFDRLVDEDPHTRTALAELAARYVLAGQPVLITVNNKAEGSAPLSCIALAKEIAAACVRWRGEAA
Sequences:
>Translated_387_residues MAGTVGDANDAGDRADPADSADPGVPDDPADPDDPPEPAATPALPGFDAPPAAAPKKRTRRRGVAPAAIADDVAAAAREL PPHVRLGTSSWYFPGWKDIVYGDDYAQSKLSREGLEAYAAHPLLKSVSLDRSFYAPLTVANYLRYAQQVPDDFRFVVKAP ALVTDAVLRGARGEPSGPNPAFLNAQLAADEFVRPCLEGLGNKAGALVFQFPPLPDTLLADPAALVDRLSTFLGALPALP AAPDGPRYAVEIRDASLLTPRFIRALAAAGVRYCVGLHAKMPDPLRQAAALALLDGEPSGPLIVRWSLHGGFKYEQAKAK YEPFDRLVDEDPHTRTALAELAARYVLAGQPVLITVNNKAEGSAPLSCIALAKEIAAACVRWRGEAA >Mature_386_residues AGTVGDANDAGDRADPADSADPGVPDDPADPDDPPEPAATPALPGFDAPPAAAPKKRTRRRGVAPAAIADDVAAAARELP PHVRLGTSSWYFPGWKDIVYGDDYAQSKLSREGLEAYAAHPLLKSVSLDRSFYAPLTVANYLRYAQQVPDDFRFVVKAPA LVTDAVLRGARGEPSGPNPAFLNAQLAADEFVRPCLEGLGNKAGALVFQFPPLPDTLLADPAALVDRLSTFLGALPALPA APDGPRYAVEIRDASLLTPRFIRALAAAGVRYCVGLHAKMPDPLRQAAALALLDGEPSGPLIVRWSLHGGFKYEQAKAKY EPFDRLVDEDPHTRTALAELAARYVLAGQPVLITVNNKAEGSAPLSCIALAKEIAAACVRWRGEAA
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40915; Mature: 40783
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGTVGDANDAGDRADPADSADPGVPDDPADPDDPPEPAATPALPGFDAPPAAAPKKRTR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH RRGVAPAAIADDVAAAARELPPHVRLGTSSWYFPGWKDIVYGDDYAQSKLSREGLEAYAA HCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHH HPLLKSVSLDRSFYAPLTVANYLRYAQQVPDDFRFVVKAPALVTDAVLRGARGEPSGPNP HHHHHHHHCCCHHCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC AFLNAQLAADEFVRPCLEGLGNKAGALVFQFPPLPDTLLADPAALVDRLSTFLGALPALP CEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHCCCC AAPDGPRYAVEIRDASLLTPRFIRALAAAGVRYCVGLHAKMPDPLRQAAALALLDGEPSG CCCCCCEEEEEECCCHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCC PLIVRWSLHGGFKYEQAKAKYEPFDRLVDEDPHTRTALAELAARYVLAGQPVLITVNNKA CEEEEEECCCCCCHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC EGSAPLSCIALAKEIAAACVRWRGEAA CCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AGTVGDANDAGDRADPADSADPGVPDDPADPDDPPEPAATPALPGFDAPPAAAPKKRTR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH RRGVAPAAIADDVAAAARELPPHVRLGTSSWYFPGWKDIVYGDDYAQSKLSREGLEAYAA HCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHH HPLLKSVSLDRSFYAPLTVANYLRYAQQVPDDFRFVVKAPALVTDAVLRGARGEPSGPNP HHHHHHHHCCCHHCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC AFLNAQLAADEFVRPCLEGLGNKAGALVFQFPPLPDTLLADPAALVDRLSTFLGALPALP CEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHCCCC AAPDGPRYAVEIRDASLLTPRFIRALAAAGVRYCVGLHAKMPDPLRQAAALALLDGEPSG CCCCCCEEEEEECCCHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCC PLIVRWSLHGGFKYEQAKAKYEPFDRLVDEDPHTRTALAELAARYVLAGQPVLITVNNKA CEEEEEECCCCCCHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC EGSAPLSCIALAKEIAAACVRWRGEAA CCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA