| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718472
Identifier: 53718472
GI number: 53718472
Start: 968501
End: 969802
Strand: Reverse
Name: 53718472
Synonym: BPSL0834
Alternate gene names: NA
Gene position: 969802-968501 (Counterclockwise)
Preceding gene: 53718473
Following gene: 53718463
Centisome position: 23.8
GC content: 67.74
Gene sequence:
>1302_bases ATGAAAACAGGACGTCGACACTTCGTGCGCTCGGTTGCGAGCGCCTCGGCCGCGCTCGCGGCCGCCGCATGGTCCCCGGC GCGCGCCGCAATCGACGCGCCCGCCTCGCCCGCGACCGCGCTGTCGCTCACGCCCGGGCGCTGGTCGCCGAACAACGTCG CGCGGCTGCGCGCGGTGCTCGCCGGGCACGGCGCGTCGAGCCCGCGCTACCGCCCCGAGCACCGCCCGTACGCGGTGTTC GACTGGGACAACACGAGCATCATGAACGACTGCGAAGAAGCGCTGCTGATGCACCAGATCGACGGGCTGCATTACCGGCT CACGCCCGAGCAGTTCTCGGCGATCCTGCGCCAGGGCGTGCCCGACGGCCCGTTCGACGCGAAGCTCGGCTATACGAGCG TCGACGGCAAGCCCGTGCGGATGGAGGACATCGCGGCCGACGTCGACGCCGACTACCGGTGGCTGCATGCGAACTATCGC GGCCTCGCGGGCGACAAGCCGCTCGACGAGATCCACCGCAGCGAGCCGTTCCGGGATTTCCGCGCGAAGCTGTACTTCAT GTACGACGCGATCTGCGACACGTATCCGGTCGAGATCGGCTACAAGTGGATCATGTACTGGTACGCGGGCATGACGCGCG ACGAGTTGCAGGCGATGGCGTTCGACAGCAACGTCGCGAACCTCGGCGACGCGCTGCGCAAGGTGACCTACGAAAGCTCG CGCGCGCTGCCGGGCAAGGCGGGCGTCATCGCCGCGACGCACTTCCACGGCATCCGCATCCACGAGGAGATCCGCGCGGT GATGGACACGCTGCGCTCGAACGGCATCGACGTGTACGTCAGCACCGCATCGCTCGACGACGTCGTGCGCGTGTTCGCGG GCCATCCGGCGTTCGGCTACGGCGTGCCCGCCGAAAACGTGATCGGCATGCGGCTCACGATGGCGGACGGCAAGTACATG AACGAATACCTGCCGAACTGGCACTTCAACTACGGGCCGGGCAAGACGGTCGGCATCCGCCGCGAGCTCGAATCGAAGAA GGGCTACGGGCCGCTGCTCGTGTTCGGCGACAGCGACGGCGACGCGTGGATGCTGCGCGACTTCGCCGATACCGCGGTCG GCGTGATCGTCAACCGGATGAAGAAAGGCGAGATCGGTATCGACAGCCGAAAGGCGGCCGAGCAGATCGGCGCGAAGGAC GCGCGGCTCGTGCTGCAAGGGCGCGACGAGAACACCGGGCTGATGGTCGCCGACGAGCGCTCGATCAAGTACGGCAAGCG CGATCCCAAACTGCTCGCGTGA
Upstream 100 bases:
>100_bases ATGGGCAACGATGCTGGGCGGCACCCGCCTCTGCCGGCGGATCGGCGGGCGGCACGCGGCCGGCCCGGCCCCGGCGCGCG AATCCCCCTCGGAGAACTCG
Downstream 100 bases:
>100_bases GCGCGGCGCGCGGGCCGGCGGGCCGGCGGGCCGGCGGGGCGGCGGGGCGGCGGGGCGGCGGGCGGGCCCTGCAGGCCGCG CGCCTTGCCTGCCTCGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; Lipoprotein Pyruvate-Formate Lyase
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MKTGRRHFVRSVASASAALAAAAWSPARAAIDAPASPATALSLTPGRWSPNNVARLRAVLAGHGASSPRYRPEHRPYAVF DWDNTSIMNDCEEALLMHQIDGLHYRLTPEQFSAILRQGVPDGPFDAKLGYTSVDGKPVRMEDIAADVDADYRWLHANYR GLAGDKPLDEIHRSEPFRDFRAKLYFMYDAICDTYPVEIGYKWIMYWYAGMTRDELQAMAFDSNVANLGDALRKVTYESS RALPGKAGVIAATHFHGIRIHEEIRAVMDTLRSNGIDVYVSTASLDDVVRVFAGHPAFGYGVPAENVIGMRLTMADGKYM NEYLPNWHFNYGPGKTVGIRRELESKKGYGPLLVFGDSDGDAWMLRDFADTAVGVIVNRMKKGEIGIDSRKAAEQIGAKD ARLVLQGRDENTGLMVADERSIKYGKRDPKLLA
Sequences:
>Translated_433_residues MKTGRRHFVRSVASASAALAAAAWSPARAAIDAPASPATALSLTPGRWSPNNVARLRAVLAGHGASSPRYRPEHRPYAVF DWDNTSIMNDCEEALLMHQIDGLHYRLTPEQFSAILRQGVPDGPFDAKLGYTSVDGKPVRMEDIAADVDADYRWLHANYR GLAGDKPLDEIHRSEPFRDFRAKLYFMYDAICDTYPVEIGYKWIMYWYAGMTRDELQAMAFDSNVANLGDALRKVTYESS RALPGKAGVIAATHFHGIRIHEEIRAVMDTLRSNGIDVYVSTASLDDVVRVFAGHPAFGYGVPAENVIGMRLTMADGKYM NEYLPNWHFNYGPGKTVGIRRELESKKGYGPLLVFGDSDGDAWMLRDFADTAVGVIVNRMKKGEIGIDSRKAAEQIGAKD ARLVLQGRDENTGLMVADERSIKYGKRDPKLLA >Mature_433_residues MKTGRRHFVRSVASASAALAAAAWSPARAAIDAPASPATALSLTPGRWSPNNVARLRAVLAGHGASSPRYRPEHRPYAVF DWDNTSIMNDCEEALLMHQIDGLHYRLTPEQFSAILRQGVPDGPFDAKLGYTSVDGKPVRMEDIAADVDADYRWLHANYR GLAGDKPLDEIHRSEPFRDFRAKLYFMYDAICDTYPVEIGYKWIMYWYAGMTRDELQAMAFDSNVANLGDALRKVTYESS RALPGKAGVIAATHFHGIRIHEEIRAVMDTLRSNGIDVYVSTASLDDVVRVFAGHPAFGYGVPAENVIGMRLTMADGKYM NEYLPNWHFNYGPGKTVGIRRELESKKGYGPLLVFGDSDGDAWMLRDFADTAVGVIVNRMKKGEIGIDSRKAAEQIGAKD ARLVLQGRDENTGLMVADERSIKYGKRDPKLLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48010; Mature: 48010
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTGRRHFVRSVASASAALAAAAWSPARAAIDAPASPATALSLTPGRWSPNNVARLRAVL CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHH AGHGASSPRYRPEHRPYAVFDWDNTSIMNDCEEALLMHQIDGLHYRLTPEQFSAILRQGV HCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCC PDGPFDAKLGYTSVDGKPVRMEDIAADVDADYRWLHANYRGLAGDKPLDEIHRSEPFRDF CCCCCCCCCCEECCCCCCEEHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCHHH RAKLYFMYDAICDTYPVEIGYKWIMYWYAGMTRDELQAMAFDSNVANLGDALRKVTYESS HHHHHHHHHHHHCCCCHHHCHHEEEEHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCC RALPGKAGVIAATHFHGIRIHEEIRAVMDTLRSNGIDVYVSTASLDDVVRVFAGHPAFGY CCCCCCCCEEEEEEECCEEEHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCC GVPAENVIGMRLTMADGKYMNEYLPNWHFNYGPGKTVGIRRELESKKGYGPLLVFGDSDG CCCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCCCEEHHHHHHHHCCCCCCEEEEECCCC DAWMLRDFADTAVGVIVNRMKKGEIGIDSRKAAEQIGAKDARLVLQGRDENTGLMVADER CEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEECCC SIKYGKRDPKLLA CCCCCCCCCCCCC >Mature Secondary Structure MKTGRRHFVRSVASASAALAAAAWSPARAAIDAPASPATALSLTPGRWSPNNVARLRAVL CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHH AGHGASSPRYRPEHRPYAVFDWDNTSIMNDCEEALLMHQIDGLHYRLTPEQFSAILRQGV HCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCC PDGPFDAKLGYTSVDGKPVRMEDIAADVDADYRWLHANYRGLAGDKPLDEIHRSEPFRDF CCCCCCCCCCEECCCCCCEEHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCHHH RAKLYFMYDAICDTYPVEIGYKWIMYWYAGMTRDELQAMAFDSNVANLGDALRKVTYESS HHHHHHHHHHHHCCCCHHHCHHEEEEHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCC RALPGKAGVIAATHFHGIRIHEEIRAVMDTLRSNGIDVYVSTASLDDVVRVFAGHPAFGY CCCCCCCCEEEEEEECCEEEHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCC GVPAENVIGMRLTMADGKYMNEYLPNWHFNYGPGKTVGIRRELESKKGYGPLLVFGDSDG CCCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCCCEEHHHHHHHHCCCCCCEEEEECCCC DAWMLRDFADTAVGVIVNRMKKGEIGIDSRKAAEQIGAKDARLVLQGRDENTGLMVADER CEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEECCC SIKYGKRDPKLLA CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA