| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718442
Identifier: 53718442
GI number: 53718442
Start: 931480
End: 932619
Strand: Reverse
Name: 53718442
Synonym: BPSL0803
Alternate gene names: NA
Gene position: 932619-931480 (Counterclockwise)
Preceding gene: 53718443
Following gene: 53718432
Centisome position: 22.89
GC content: 70.09
Gene sequence:
>1140_bases ATGAATCCGCTGCAACGACAACAACAACCCGCCGGCGCCGCGCGCCGCCGCTTCTGGCGCGGCGCGCAGGTCGCGCTCGC GAGCGCCGCGTTCGCGCTGCTCGCCGCCTGCGGCGGCGGCGACGACAACGGCTCGTCGCAGCCGAGCGCCGGCGTGAACA TGCAGGTCGTGTCCTTCGGCGACAGCCTGTCGGACGTCGGCACGTATTCGCCGCAGATCCTGATCGGCTTCGGCGGCGGG CGCTTCACGACGAATCCGGGCCAGGTATGGACGCAGGACGTCGCCGCCTACTACGGCGGCACGCTCACCCCGGCGTTCGA AGGCGGCTTCGGCGTGCCGCTGCAGGCGGCGGGCGGCCTGGGCTACGCGCAGGGCGGCTCGCGCGTCACGCAGCAGCCGG GCATCGGCCACGCGGACGCGAGCGTCGCGAACGCCGACTACGCGCAGGCGACGACCGTGCCCGTCGCGACGCAGGTGCAG CAATACCTGCAGCAGCACGGCAGCTTCAACGCGAATCAGATCGTGCTCGTCAACGGCGGCGCGAACGACATCTTCTATCA GGTGCAGATCGCGCAGGCTCAGGGCAATACGCCCGCCGCGCAGCTCGCCGCCGCGCAGCAGATCGGCCTCGCCGCGCAGC AGCTCGCGGGCGTCGTCCAGCAGATCGTCGCGGCGGGCGCGACGCACGTGTTCGTATCGAACGTGCCGGACATCGGCGGC ACGCCGCTCGCGGCGTCGACGGGCCAGCAGGCCGCGCTCACGCAGTTGTCGACGATCTTCAACAGCACGCTCGTCGCGGC GCTGAAGGCGCTGAACGTCGATCCCGCGAAGGCCGTGCTGATCGACGCATTCACGTGGCAGGACGGCATCGCCGCGAACT ACCAGGGCAACGGCTTCTCGGTGGCGAACACGGGCACCGCGTGCAACCTGCAATCGATGATCGCCGCCGCGACGAAGGCG GGGGTCGCGAACCCGACCGCGTTCGGCTCGTCGCTGTTCTGCTCGCCGCAGATGTACACGGTCGCGAACGCGGACCAGAC GTACATGTTCGCCGACACGGTCCACCCGACGACGCGCCTGCACGCGCTCTTCGCGCAATACGTCGAGCAGCAGATCGCGA AAACGGGCGTCGGCAAGTAA
Upstream 100 bases:
>100_bases ACGAGGCTTCACAACCATTGCGCCGAGCCGCGTCGCCGCCACGCGTCGCGCCCCCGGCGCAGGCCATGCAACACAAGCCT ATCTACGAGGAGAGACCCGC
Downstream 100 bases:
>100_bases CGCGGGCTCGCGACGGGCGGCGCGCCTCGCGCGGCCCGGCCCGATCGCGACGCGAAACGGCGGCCGGCTTGAAGTGACGA AGTGAAACCGCCCCGTCACG
Product: putative acylhydrolase
Products: NA
Alternate protein names: Lipase/Esterase; GDSL Family Lipase; Phospholipase/Lecithinase/Hemolysin-Like Protein; Triacylglycerol Lipase/Esterase Protein; Lipase / Esterase; Esterase; Phospholipase/Lecithinase/Hemolysin-Like; Lipase / Esterase Protein
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MNPLQRQQQPAGAARRRFWRGAQVALASAAFALLAACGGGDDNGSSQPSAGVNMQVVSFGDSLSDVGTYSPQILIGFGGG RFTTNPGQVWTQDVAAYYGGTLTPAFEGGFGVPLQAAGGLGYAQGGSRVTQQPGIGHADASVANADYAQATTVPVATQVQ QYLQQHGSFNANQIVLVNGGANDIFYQVQIAQAQGNTPAAQLAAAQQIGLAAQQLAGVVQQIVAAGATHVFVSNVPDIGG TPLAASTGQQAALTQLSTIFNSTLVAALKALNVDPAKAVLIDAFTWQDGIAANYQGNGFSVANTGTACNLQSMIAAATKA GVANPTAFGSSLFCSPQMYTVANADQTYMFADTVHPTTRLHALFAQYVEQQIAKTGVGK
Sequences:
>Translated_379_residues MNPLQRQQQPAGAARRRFWRGAQVALASAAFALLAACGGGDDNGSSQPSAGVNMQVVSFGDSLSDVGTYSPQILIGFGGG RFTTNPGQVWTQDVAAYYGGTLTPAFEGGFGVPLQAAGGLGYAQGGSRVTQQPGIGHADASVANADYAQATTVPVATQVQ QYLQQHGSFNANQIVLVNGGANDIFYQVQIAQAQGNTPAAQLAAAQQIGLAAQQLAGVVQQIVAAGATHVFVSNVPDIGG TPLAASTGQQAALTQLSTIFNSTLVAALKALNVDPAKAVLIDAFTWQDGIAANYQGNGFSVANTGTACNLQSMIAAATKA GVANPTAFGSSLFCSPQMYTVANADQTYMFADTVHPTTRLHALFAQYVEQQIAKTGVGK >Mature_379_residues MNPLQRQQQPAGAARRRFWRGAQVALASAAFALLAACGGGDDNGSSQPSAGVNMQVVSFGDSLSDVGTYSPQILIGFGGG RFTTNPGQVWTQDVAAYYGGTLTPAFEGGFGVPLQAAGGLGYAQGGSRVTQQPGIGHADASVANADYAQATTVPVATQVQ QYLQQHGSFNANQIVLVNGGANDIFYQVQIAQAQGNTPAAQLAAAQQIGLAAQQLAGVVQQIVAAGATHVFVSNVPDIGG TPLAASTGQQAALTQLSTIFNSTLVAALKALNVDPAKAVLIDAFTWQDGIAANYQGNGFSVANTGTACNLQSMIAAATKA GVANPTAFGSSLFCSPQMYTVANADQTYMFADTVHPTTRLHALFAQYVEQQIAKTGVGK
Specific function: Unknown
COG id: COG3240
COG function: function code IR; Phospholipase/lecithinase/hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38777; Mature: 38777
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPLQRQQQPAGAARRRFWRGAQVALASAAFALLAACGGGDDNGSSQPSAGVNMQVVSFG CCCHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECC DSLSDVGTYSPQILIGFGGGRFTTNPGQVWTQDVAAYYGGTLTPAFEGGFGVPLQAAGGL CCHHHHCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC GYAQGGSRVTQQPGIGHADASVANADYAQATTVPVATQVQQYLQQHGSFNANQIVLVNGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECC ANDIFYQVQIAQAQGNTPAAQLAAAQQIGLAAQQLAGVVQQIVAAGATHVFVSNVPDIGG CCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC TPLAASTGQQAALTQLSTIFNSTLVAALKALNVDPAKAVLIDAFTWQDGIAANYQGNGFS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEECCCCCCEE VANTGTACNLQSMIAAATKAGVANPTAFGSSLFCSPQMYTVANADQTYMFADTVHPTTRL EECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEEECCCCEEEEEECCCCHHHH HALFAQYVEQQIAKTGVGK HHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNPLQRQQQPAGAARRRFWRGAQVALASAAFALLAACGGGDDNGSSQPSAGVNMQVVSFG CCCHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECC DSLSDVGTYSPQILIGFGGGRFTTNPGQVWTQDVAAYYGGTLTPAFEGGFGVPLQAAGGL CCHHHHCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC GYAQGGSRVTQQPGIGHADASVANADYAQATTVPVATQVQQYLQQHGSFNANQIVLVNGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECC ANDIFYQVQIAQAQGNTPAAQLAAAQQIGLAAQQLAGVVQQIVAAGATHVFVSNVPDIGG CCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC TPLAASTGQQAALTQLSTIFNSTLVAALKALNVDPAKAVLIDAFTWQDGIAANYQGNGFS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEECCCCCCEE VANTGTACNLQSMIAAATKAGVANPTAFGSSLFCSPQMYTVANADQTYMFADTVHPTTRL EECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEEECCCCEEEEEECCCCHHHH HALFAQYVEQQIAKTGVGK HHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA