| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is yheT [H]
Identifier: 53718428
GI number: 53718428
Start: 917364
End: 918398
Strand: Reverse
Name: yheT [H]
Synonym: BPSL0789
Alternate gene names: 53718428
Gene position: 918398-917364 (Counterclockwise)
Preceding gene: 53718429
Following gene: 53718427
Centisome position: 22.54
GC content: 71.59
Gene sequence:
>1035_bases ATGAGCACCGCACTCCCCCCGCTTCCCGCTGCCGACGAGACCGCCCGCCCGGCAGCCTCGTCCTTCTACCGCGCGCCGCT CTGGCTGCCGACGAGCCACGCGCAGACGATCGTCCCCGCGCTCTTCGCGCGCCGGCCCGACGTCGCATACCGGCGCGAGC GCTGGGACACGCCCGACGGCGATTTCATCGACGTCGACTGGCTCGCGCCCCCCGCCGGCGCGGCGCCCGGGCCGCTCGCG CCGCTCGCCGTGCTGTTCCACGGCCTCGAAGGCAGCTCCGATTCGCATTACGCGCGCGTGCTGATGGCGGCCGCCCGCGC GCGCGGCTGGCACGGCGTCGTCCCGCACTTTCGCAGCTGCGGCGGCGAGATGAACCGGATGCCGCGCTTCTACCACCTCG CCGACAGCGCCGAGGTCGACTGGATCCTGCGGCGGCTCGCGAAGAGCCATCGCGGGCCGCTCGTCGTGGTCGGCGTATCG CTCGGCGGCAACGTGCTGCTGCGCTGGCTCGGCGAGCGGCGCGGCGATACGTCGATCGTCGCGACCGCCGCCGCGGTGTC GACGCCGATCGACGTCCACGCGGGCGGCCGCGCGCTGTCGCAAGGCTTCTCGATGGTCTATACGCGCAGCTTCCTGAAGA CACTGAAATGGAAGGCGCTCGTGAAGCTCGAACAGTACCCGGGGCTTTTCGACAAGCAAGCGTTGCTCGCCGCGCGCACG ATGCACGATTTCGACGACATCGTCACCGCGCCGCTGCACGGCTTCGCCGATGCGAACGACTACTGGACGCAGGCGACGAC GCGCCCGCTCCTCGCGGCGATCGACGTGCCCACGCTGATCCTCAACGCGCGCAACGATCCGTTCCTGCCCGCCTCGGCGC TGCCCGGCCCGCGCGAGGTGTCGCGCGCGGTCGTGCTCGACCAGCCCGAGCACGGCGGCCACGCGGGCTTCATGACGGGC CCGTTTCCCGGGCGCATCGACTGGCTGCCCGCCCGCGTCTTCGAATTCTGCTCACGCTTCACCGATCATGGATGA
Upstream 100 bases:
>100_bases ATCCACGCGAGTCCGATCCCGGAGCAGACGGCCACGCAGTTCGCCGCGAAGATCCGCCACGCACAGGGGCCGCTCCACTG AGCGACGGGCGTTCGCAGCG
Downstream 100 bases:
>100_bases CATCGTCAAACAGGCGCTCGCCAAATGGCCGAACGTCCCGCACTGCACCGGATGGCTGCTGCTCGACCGGCGCGGCGGCT GGCGGATGCGCGACGACGCC
Product: putative hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSTALPPLPAADETARPAASSFYRAPLWLPTSHAQTIVPALFARRPDVAYRRERWDTPDGDFIDVDWLAPPAGAAPGPLA PLAVLFHGLEGSSDSHYARVLMAAARARGWHGVVPHFRSCGGEMNRMPRFYHLADSAEVDWILRRLAKSHRGPLVVVGVS LGGNVLLRWLGERRGDTSIVATAAAVSTPIDVHAGGRALSQGFSMVYTRSFLKTLKWKALVKLEQYPGLFDKQALLAART MHDFDDIVTAPLHGFADANDYWTQATTRPLLAAIDVPTLILNARNDPFLPASALPGPREVSRAVVLDQPEHGGHAGFMTG PFPGRIDWLPARVFEFCSRFTDHG
Sequences:
>Translated_344_residues MSTALPPLPAADETARPAASSFYRAPLWLPTSHAQTIVPALFARRPDVAYRRERWDTPDGDFIDVDWLAPPAGAAPGPLA PLAVLFHGLEGSSDSHYARVLMAAARARGWHGVVPHFRSCGGEMNRMPRFYHLADSAEVDWILRRLAKSHRGPLVVVGVS LGGNVLLRWLGERRGDTSIVATAAAVSTPIDVHAGGRALSQGFSMVYTRSFLKTLKWKALVKLEQYPGLFDKQALLAART MHDFDDIVTAPLHGFADANDYWTQATTRPLLAAIDVPTLILNARNDPFLPASALPGPREVSRAVVLDQPEHGGHAGFMTG PFPGRIDWLPARVFEFCSRFTDHG >Mature_343_residues STALPPLPAADETARPAASSFYRAPLWLPTSHAQTIVPALFARRPDVAYRRERWDTPDGDFIDVDWLAPPAGAAPGPLAP LAVLFHGLEGSSDSHYARVLMAAARARGWHGVVPHFRSCGGEMNRMPRFYHLADSAEVDWILRRLAKSHRGPLVVVGVSL GGNVLLRWLGERRGDTSIVATAAAVSTPIDVHAGGRALSQGFSMVYTRSFLKTLKWKALVKLEQYPGLFDKQALLAARTM HDFDDIVTAPLHGFADANDYWTQATTRPLLAAIDVPTLILNARNDPFLPASALPGPREVSRAVVLDQPEHGGHAGFMTGP FPGRIDWLPARVFEFCSRFTDHG
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI23397663, Length=338, Percent_Identity=26.3313609467456, Blast_Score=129, Evalue=4e-30, Organism=Homo sapiens, GI194578891, Length=324, Percent_Identity=28.7037037037037, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI23397659, Length=346, Percent_Identity=25.7225433526012, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI23397661, Length=346, Percent_Identity=25.7225433526012, Blast_Score=97, Evalue=3e-20, Organism=Escherichia coli, GI1789752, Length=315, Percent_Identity=40.3174603174603, Blast_Score=225, Evalue=3e-60, Organism=Caenorhabditis elegans, GI17566110, Length=310, Percent_Identity=27.741935483871, Blast_Score=117, Evalue=8e-27, Organism=Caenorhabditis elegans, GI71985405, Length=310, Percent_Identity=26.7741935483871, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI71985413, Length=192, Percent_Identity=26.5625, Blast_Score=65, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6323866, Length=247, Percent_Identity=23.4817813765182, Blast_Score=84, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6319655, Length=287, Percent_Identity=24.0418118466899, Blast_Score=79, Evalue=7e-16, Organism=Saccharomyces cerevisiae, GI6325162, Length=296, Percent_Identity=25.6756756756757, Blast_Score=74, Evalue=3e-14, Organism=Drosophila melanogaster, GI281398151, Length=332, Percent_Identity=29.2168674698795, Blast_Score=138, Evalue=6e-33, Organism=Drosophila melanogaster, GI24652003, Length=332, Percent_Identity=29.2168674698795, Blast_Score=137, Evalue=8e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 37562; Mature: 37431
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTALPPLPAADETARPAASSFYRAPLWLPTSHAQTIVPALFARRPDVAYRRERWDTPDG CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCC DFIDVDWLAPPAGAAPGPLAPLAVLFHGLEGSSDSHYARVLMAAARARGWHGVVPHFRSC CEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHC GGEMNRMPRFYHLADSAEVDWILRRLAKSHRGPLVVVGVSLGGNVLLRWLGERRGDTSIV CCHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCHHE ATAAAVSTPIDVHAGGRALSQGFSMVYTRSFLKTLKWKALVKLEQYPGLFDKQALLAART EHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH MHDFDDIVTAPLHGFADANDYWTQATTRPLLAAIDVPTLILNARNDPFLPASALPGPREV HHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHH SRAVVLDQPEHGGHAGFMTGPFPGRIDWLPARVFEFCSRFTDHG CCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure STALPPLPAADETARPAASSFYRAPLWLPTSHAQTIVPALFARRPDVAYRRERWDTPDG CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCC DFIDVDWLAPPAGAAPGPLAPLAVLFHGLEGSSDSHYARVLMAAARARGWHGVVPHFRSC CEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHC GGEMNRMPRFYHLADSAEVDWILRRLAKSHRGPLVVVGVSLGGNVLLRWLGERRGDTSIV CCHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCHHE ATAAAVSTPIDVHAGGRALSQGFSMVYTRSFLKTLKWKALVKLEQYPGLFDKQALLAART EHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH MHDFDDIVTAPLHGFADANDYWTQATTRPLLAAIDVPTLILNARNDPFLPASALPGPREV HHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHH SRAVVLDQPEHGGHAGFMTGPFPGRIDWLPARVFEFCSRFTDHG CCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]