| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718427
Identifier: 53718427
GI number: 53718427
Start: 916748
End: 917371
Strand: Reverse
Name: 53718427
Synonym: BPSL0788
Alternate gene names: NA
Gene position: 917371-916748 (Counterclockwise)
Preceding gene: 53718428
Following gene: 53718425
Centisome position: 22.51
GC content: 73.72
Gene sequence:
>624_bases ATGGATGACATCGTCAAACAGGCGCTCGCCAAATGGCCGAACGTCCCGCACTGCACCGGATGGCTGCTGCTCGACCGGCG CGGCGGCTGGCGGATGCGCGACGACGCCGCGCAGGCGGCGGGCGCGCTCGGCTCGCCCGTGCGGCACCCCGCGCTCGTCG ATTTCATCGCCCGCAACTACGAGCGCGACGAACACGGCCAATGGTTCTTCCAGAACGGGCCGCAGCGCGTGTACGTCGAG CTTGCGTATACGCCGTGGATCGTCCGGCTCGCGGCCGCGCCCGCCGGCGGCGGCTGCGAGCCCGCGCGCGTCGCGCTGAC CGATCACACCGGCCGTGCGTTCGAGCCGGCGCGCGCATGGCTCGACGATGCGGGCGGCGTGCTGTTCGCCGATACGTCGA CGCCGCCGCGCGTCGCCGCGCTGCACGATCACGATCTGGCGCTCTTCGCCGATCGCGCCGACCTCGACGACGACGGCGCG CACGGCGTGCTGCATCTCGGCGGCGGCGTCGATCTGCCGCTCGAACCGATCCGGCGCGACGACGTCGCGCGGCGGTTCGG GTTCGTCGCCAGTCCGGCCGCCCGCGCGGGAGAACGGGCGGCGGGCGGCAAGCCGACGGACTGA
Upstream 100 bases:
>100_bases GAGCACGGCGGCCACGCGGGCTTCATGACGGGCCCGTTTCCCGGGCGCATCGACTGGCTGCCCGCCCGCGTCTTCGAATT CTGCTCACGCTTCACCGATC
Downstream 100 bases:
>100_bases CGCGGGCCTTCGGACGCTGCGGGCTTGGCGCGGGTGCCCCCGTGCGTGGCGGTTCGTTTGCTTCGATTACCTCGTTTGCG CCGGCCGCTTCGTCCACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MDDIVKQALAKWPNVPHCTGWLLLDRRGGWRMRDDAAQAAGALGSPVRHPALVDFIARNYERDEHGQWFFQNGPQRVYVE LAYTPWIVRLAAAPAGGGCEPARVALTDHTGRAFEPARAWLDDAGGVLFADTSTPPRVAALHDHDLALFADRADLDDDGA HGVLHLGGGVDLPLEPIRRDDVARRFGFVASPAARAGERAAGGKPTD
Sequences:
>Translated_207_residues MDDIVKQALAKWPNVPHCTGWLLLDRRGGWRMRDDAAQAAGALGSPVRHPALVDFIARNYERDEHGQWFFQNGPQRVYVE LAYTPWIVRLAAAPAGGGCEPARVALTDHTGRAFEPARAWLDDAGGVLFADTSTPPRVAALHDHDLALFADRADLDDDGA HGVLHLGGGVDLPLEPIRRDDVARRFGFVASPAARAGERAAGGKPTD >Mature_207_residues MDDIVKQALAKWPNVPHCTGWLLLDRRGGWRMRDDAAQAAGALGSPVRHPALVDFIARNYERDEHGQWFFQNGPQRVYVE LAYTPWIVRLAAAPAGGGCEPARVALTDHTGRAFEPARAWLDDAGGVLFADTSTPPRVAALHDHDLALFADRADLDDDGA HGVLHLGGGVDLPLEPIRRDDVARRFGFVASPAARAGERAAGGKPTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22383; Mature: 22383
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDIVKQALAKWPNVPHCTGWLLLDRRGGWRMRDDAAQAAGALGSPVRHPALVDFIARNY CHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCC ERDEHGQWFFQNGPQRVYVELAYTPWIVRLAAAPAGGGCEPARVALTDHTGRAFEPARAW CCCCCCCEEEECCCEEEEEEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCHHHHH LDDAGGVLFADTSTPPRVAALHDHDLALFADRADLDDDGAHGVLHLGGGVDLPLEPIRRD HHCCCCEEEECCCCCCEEEEECCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCHH DVARRFGFVASPAARAGERAAGGKPTD HHHHHHCCCCCCHHHCCCCCCCCCCCC >Mature Secondary Structure MDDIVKQALAKWPNVPHCTGWLLLDRRGGWRMRDDAAQAAGALGSPVRHPALVDFIARNY CHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCC ERDEHGQWFFQNGPQRVYVELAYTPWIVRLAAAPAGGGCEPARVALTDHTGRAFEPARAW CCCCCCCEEEECCCEEEEEEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCHHHHH LDDAGGVLFADTSTPPRVAALHDHDLALFADRADLDDDGAHGVLHLGGGVDLPLEPIRRD HHCCCCEEEECCCCCCEEEEECCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCHH DVARRFGFVASPAARAGERAAGGKPTD HHHHHHCCCCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA