| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is luxQ [H]
Identifier: 53718372
GI number: 53718372
Start: 845513
End: 847321
Strand: Reverse
Name: luxQ [H]
Synonym: BPSL0732
Alternate gene names: 53718372
Gene position: 847321-845513 (Counterclockwise)
Preceding gene: 53718373
Following gene: 53718369
Centisome position: 20.8
GC content: 66.33
Gene sequence:
>1809_bases ATGAGCCGGGTCGAATGGCGCAATGAAAAAATCATCGTCGCCCTGGGTTCCCTGTGGATCCTGGGCTTCGCCGCGTGGGC GTTCCTGCTGTACGACCTGCTCGGCACGTCCGTCAAGGAAGGCATTCTGGAAGGCCCGCGCGAAGGCGTGTTCTGGACTG CCGCGCAATACCGGAACTCGTTCAGCCGGTTCGATCGGCAACTGATTCTCTACGCGGCCGGCGAGAACCGCGACTTCGAC GCCGTGCTGCTCCAGCTCGACAGCCTCGAAGCGTCGTTCGGCTTTCTCGAGCGGCCGTCCGAAGTCTCCGCGTACTGGCT GAGCATTCCGAAGGCCCGTGGCGACATCGCCGAGCTGTCGCGCTTCATGGCGAGCCTGCGCCGCGACGTTCCGGCGCTGC GCGCGCGCCCCGACGATACGAAGCGCGTGCTGGGCGAGCTCGCCCGGCAATGGCCCAAGGTGAACGCGCTCGCGAATTAC TTTCGCGCGATCGAAATGGAGCAGCGCGATTTCACGTTCCATCAGTTGAAGGAAAAGCGGCGCGCGATCGTCATGCTGGG CGGCGTGCTCGGCATCATTCTCGGCGCGCTGTTCCTGCTGCTGTTCTACACGGTCCGCACGCGCGGCAGCCTGCTCGAGC AGCAGCAGGCGGCGCTCGACGCGGAACGCAAGGCGTCCGATCGCGCGTTCGAGATGATCGCCGCGAAAAACGCGTTCCTC GGCATGGTGAGCCATGAGCTGCGCACGCCGCTGCAGGCGATCTGCGGCTCGATCGAAGTGCTGCTCGCGCGGCCGCAGTC CGAAGCGAACATGAAGACGATCAAGCGGCTGCAGAACTCGGCCGCGTCGCTCGAAGCGCAGGTGAAGGACCTGACCGACT ACATCAAGCTGCGGTCCACGAATCGATCGGTGCAGTCGGAGATCGTCGAGGTCGCGCCGCTGCTCGCCGACGTGCTCGAT CCGTTGCGCGGCCGCATCCGCGACAAGCATCTGAGCACGTCGCTGCGCGTGGAGCCGCCCGCGCTCGTCGTCCGGTCCGA TCGCAAGCTGATCCAGCAGATCGTGTCGAACCTCGTCGAGAACGCGATCAAATACACGAACAGCGGAACGATCGAGATCT CGGCCGCGCTCGGCGGCACGCCCGCCAATCGGACCATGACGATCACGGTGCGCGACACCGGCGTCGGCATCGCGCGGCAT CTGCTCGCGAAGATCTTCGAGCCGTTCTTTCGCGTGAACGATCCGGGCGTGCGGCACGTCGACGGCATCGGCATGGGGCT CGCGGTCGTCCAGGAGCTCGTCGTCGCGCTGCGCGGGCACGTCGATGTGCGCAGCGCCGTCGGCGAAGGCAGCGAATTCG CCGTCACGCTGCCCGTCGAGCTGCCCGGCCGCGCCGATGCGCTCGACGACGACGCGCAGCCGTCACCGCGGGCGGCGCAT CGCGATCTGCGCGCGCTCGTCGTCGACGACAACGAGAACGCGCGCGAAACGCTGGGCGCGATGCTCGCGACGCTCGGCAT CCGGGTGGATCTGCGCGGCACCGGCAAGGAAGGCTTGCGCTGCTTCGGCGAATGTCAGCACGACATCGTCGTGCTGGATC TGGAGTTGCCCGACATCAGCGGTTTCGAGGTGGCCGAGCAGATACGCTGGGCGACGTCGTCCGACGCGGCCAGGAAGACG ACGATACTCGGCGTGAGCGCGTACGAATCGGCGCTGCTCAAGGGCGATCACGCGATCTTCGACGCCTTCATCCCCAAGCC GATTCATCTGGACACGCTCGGCGGCATCGTGAGCCGGCTGCGAAGCTGA
Upstream 100 bases:
>100_bases CGCTGTGGATCATGTATCCGCGCGACCAGTTCCCCGATGAGCTGAAGACGCCGATCAGCGAAGCGAAATTCGCGTGGCAG ATCATCGGGCTCACGGTGAA
Downstream 100 bases:
>100_bases GCGGCGGGGCCGCGCGCCGCTCGGCTCCGGGCGGCGCGCGCTTCCTTCGCTTCGATGCGGCGCCCTCGACGCACGGGCGA ATATGCGCCGGGAAGCCCAT
Product: putative two-component regulator histidine sensor kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 602; Mature: 601
Protein sequence:
>602_residues MSRVEWRNEKIIVALGSLWILGFAAWAFLLYDLLGTSVKEGILEGPREGVFWTAAQYRNSFSRFDRQLILYAAGENRDFD AVLLQLDSLEASFGFLERPSEVSAYWLSIPKARGDIAELSRFMASLRRDVPALRARPDDTKRVLGELARQWPKVNALANY FRAIEMEQRDFTFHQLKEKRRAIVMLGGVLGIILGALFLLLFYTVRTRGSLLEQQQAALDAERKASDRAFEMIAAKNAFL GMVSHELRTPLQAICGSIEVLLARPQSEANMKTIKRLQNSAASLEAQVKDLTDYIKLRSTNRSVQSEIVEVAPLLADVLD PLRGRIRDKHLSTSLRVEPPALVVRSDRKLIQQIVSNLVENAIKYTNSGTIEISAALGGTPANRTMTITVRDTGVGIARH LLAKIFEPFFRVNDPGVRHVDGIGMGLAVVQELVVALRGHVDVRSAVGEGSEFAVTLPVELPGRADALDDDAQPSPRAAH RDLRALVVDDNENARETLGAMLATLGIRVDLRGTGKEGLRCFGECQHDIVVLDLELPDISGFEVAEQIRWATSSDAARKT TILGVSAYESALLKGDHAIFDAFIPKPIHLDTLGGIVSRLRS
Sequences:
>Translated_602_residues MSRVEWRNEKIIVALGSLWILGFAAWAFLLYDLLGTSVKEGILEGPREGVFWTAAQYRNSFSRFDRQLILYAAGENRDFD AVLLQLDSLEASFGFLERPSEVSAYWLSIPKARGDIAELSRFMASLRRDVPALRARPDDTKRVLGELARQWPKVNALANY FRAIEMEQRDFTFHQLKEKRRAIVMLGGVLGIILGALFLLLFYTVRTRGSLLEQQQAALDAERKASDRAFEMIAAKNAFL GMVSHELRTPLQAICGSIEVLLARPQSEANMKTIKRLQNSAASLEAQVKDLTDYIKLRSTNRSVQSEIVEVAPLLADVLD PLRGRIRDKHLSTSLRVEPPALVVRSDRKLIQQIVSNLVENAIKYTNSGTIEISAALGGTPANRTMTITVRDTGVGIARH LLAKIFEPFFRVNDPGVRHVDGIGMGLAVVQELVVALRGHVDVRSAVGEGSEFAVTLPVELPGRADALDDDAQPSPRAAH RDLRALVVDDNENARETLGAMLATLGIRVDLRGTGKEGLRCFGECQHDIVVLDLELPDISGFEVAEQIRWATSSDAARKT TILGVSAYESALLKGDHAIFDAFIPKPIHLDTLGGIVSRLRS >Mature_601_residues SRVEWRNEKIIVALGSLWILGFAAWAFLLYDLLGTSVKEGILEGPREGVFWTAAQYRNSFSRFDRQLILYAAGENRDFDA VLLQLDSLEASFGFLERPSEVSAYWLSIPKARGDIAELSRFMASLRRDVPALRARPDDTKRVLGELARQWPKVNALANYF RAIEMEQRDFTFHQLKEKRRAIVMLGGVLGIILGALFLLLFYTVRTRGSLLEQQQAALDAERKASDRAFEMIAAKNAFLG MVSHELRTPLQAICGSIEVLLARPQSEANMKTIKRLQNSAASLEAQVKDLTDYIKLRSTNRSVQSEIVEVAPLLADVLDP LRGRIRDKHLSTSLRVEPPALVVRSDRKLIQQIVSNLVENAIKYTNSGTIEISAALGGTPANRTMTITVRDTGVGIARHL LAKIFEPFFRVNDPGVRHVDGIGMGLAVVQELVVALRGHVDVRSAVGEGSEFAVTLPVELPGRADALDDDAQPSPRAAHR DLRALVVDDNENARETLGAMLATLGIRVDLRGTGKEGLRCFGECQHDIVVLDLELPDISGFEVAEQIRWATSSDAARKTT ILGVSAYESALLKGDHAIFDAFIPKPIHLDTLGGIVSRLRS
Specific function: At low cell density, in absence of autoinducer has a kinase activity, and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is transferred to
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788713, Length=389, Percent_Identity=27.2493573264781, Blast_Score=142, Evalue=5e-35, Organism=Escherichia coli, GI87081816, Length=400, Percent_Identity=28.5, Blast_Score=141, Evalue=1e-34, Organism=Escherichia coli, GI48994928, Length=336, Percent_Identity=30.952380952381, Blast_Score=139, Evalue=5e-34, Organism=Escherichia coli, GI145693157, Length=262, Percent_Identity=32.824427480916, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1789149, Length=250, Percent_Identity=32.8, Blast_Score=102, Evalue=6e-23, Organism=Escherichia coli, GI1786600, Length=232, Percent_Identity=27.5862068965517, Blast_Score=93, Evalue=6e-20, Organism=Escherichia coli, GI1788393, Length=226, Percent_Identity=29.646017699115, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1787894, Length=241, Percent_Identity=28.2157676348548, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI87082128, Length=237, Percent_Identity=27.4261603375527, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1790346, Length=229, Percent_Identity=27.9475982532751, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI1790861, Length=217, Percent_Identity=30.8755760368664, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1786783, Length=314, Percent_Identity=22.6114649681529, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1790436, Length=312, Percent_Identity=26.2820512820513, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1789808, Length=247, Percent_Identity=27.9352226720648, Blast_Score=76, Evalue=8e-15, Organism=Escherichia coli, GI1786912, Length=277, Percent_Identity=26.3537906137184, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1788549, Length=274, Percent_Identity=24.8175182481752, Blast_Score=73, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 66519; Mature: 66388
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVEWRNEKIIVALGSLWILGFAAWAFLLYDLLGTSVKEGILEGPREGVFWTAAQYRNS CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHH FSRFDRQLILYAAGENRDFDAVLLQLDSLEASFGFLERPSEVSAYWLSIPKARGDIAELS HHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHEEECCCCCCCHHHHH RFMASLRRDVPALRARPDDTKRVLGELARQWPKVNALANYFRAIEMEQRDFTFHQLKEKR HHHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH RAIVMLGGVLGIILGALFLLLFYTVRTRGSLLEQQQAALDAERKASDRAFEMIAAKNAFL HHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMVSHELRTPLQAICGSIEVLLARPQSEANMKTIKRLQNSAASLEAQVKDLTDYIKLRST HHHHHHHCCHHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NRSVQSEIVEVAPLLADVLDPLRGRIRDKHLSTSLRVEPPALVVRSDRKLIQQIVSNLVE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEECHHHHHHHHHHHHHH NAIKYTNSGTIEISAALGGTPANRTMTITVRDTGVGIARHLLAKIFEPFFRVNDPGVRHV HHHHHCCCCCEEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCC DGIGMGLAVVQELVVALRGHVDVRSAVGEGSEFAVTLPVELPGRADALDDDAQPSPRAAH CCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHH RDLRALVVDDNENARETLGAMLATLGIRVDLRGTGKEGLRCFGECQHDIVVLDLELPDIS CCCEEEEEECCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHCCCCCEEEEEEECCCCC GFEVAEQIRWATSSDAARKTTILGVSAYESALLKGDHAIFDAFIPKPIHLDTLGGIVSRL CHHHHHHHHCCCCCCCCHHEEEEEEHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHH RS CC >Mature Secondary Structure SRVEWRNEKIIVALGSLWILGFAAWAFLLYDLLGTSVKEGILEGPREGVFWTAAQYRNS CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHH FSRFDRQLILYAAGENRDFDAVLLQLDSLEASFGFLERPSEVSAYWLSIPKARGDIAELS HHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHEEECCCCCCCHHHHH RFMASLRRDVPALRARPDDTKRVLGELARQWPKVNALANYFRAIEMEQRDFTFHQLKEKR HHHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH RAIVMLGGVLGIILGALFLLLFYTVRTRGSLLEQQQAALDAERKASDRAFEMIAAKNAFL HHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMVSHELRTPLQAICGSIEVLLARPQSEANMKTIKRLQNSAASLEAQVKDLTDYIKLRST HHHHHHHCCHHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NRSVQSEIVEVAPLLADVLDPLRGRIRDKHLSTSLRVEPPALVVRSDRKLIQQIVSNLVE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEECHHHHHHHHHHHHHH NAIKYTNSGTIEISAALGGTPANRTMTITVRDTGVGIARHLLAKIFEPFFRVNDPGVRHV HHHHHCCCCCEEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCC DGIGMGLAVVQELVVALRGHVDVRSAVGEGSEFAVTLPVELPGRADALDDDAQPSPRAAH CCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHH RDLRALVVDDNENARETLGAMLATLGIRVDLRGTGKEGLRCFGECQHDIVVLDLELPDIS CCCEEEEEECCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHCCCCCEEEEEEECCCCC GFEVAEQIRWATSSDAARKTTILGVSAYESALLKGDHAIFDAFIPKPIHLDTLGGIVSRL CHHHHHHHHCCCCCCCCHHEEEEEEHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHH RS CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA