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The map label for this gene is ctaC [H]

Identifier: 53718363

GI number: 53718363

Start: 830934

End: 832055

Strand: Reverse

Name: ctaC [H]

Synonym: BPSL0723

Alternate gene names: 53718363

Gene position: 832055-830934 (Counterclockwise)

Preceding gene: 53718364

Following gene: 53718362

Centisome position: 20.42

GC content: 74.96

Gene sequence:

>1122_bases
ATGTCGGTGAAACCCGCACAGCGGCCCGAGCGCGGGTTCGCGAAGACGCGGCGGCGCACCGCCGCGTATCGCCCCGCCGC
GACGCGCGCGGCGGGCGTCGCGCGCGCGGCGGGCGCGGCGACACCGCCACTCGCCGCCGCGCTGCACGCCGCCGCCGCGC
ACGCGCAAGCGCACGCCGCCCAGCCCGCCGCGCTGCCGCTCGCGTACGTGTTCGACAGTGCGGGCCCCGCCGCGCGGCCC
GTGCTGATCCTCGGCTGGGCGCTGCTCGCGCTGTGCACCTCGGTCTGCGTCGTGATCGCGGTCCTGCTCGCACTCGCGCT
GTTCAGGCGGCGCGCCGCGACGGCCGGCCTCACCGAGCGCGGCGGGCTCGGCTTCGTCTATGCCGGCACCGCGATCTCGA
CCGCGCTGCTGCTCGCCGCGCTCGTCTACATGCTGTGGGTGCTCGCCGCGGTCGCGAAGCCGCCGCGCCCGCCCGCGGTG
ACGATCGCGGTCACGGCGTACGACTGGTGGTGGAAGGCCGACTACGGCGGCGGCCCGCCCGACGGCTTCACGACCGCGAA
CGAACTGCACGTGCCCGTCGGCGAACCGGTGCTGATCGAGCTGCGCAGCGCCGACGTGATTCATGCGTTCTGGGCGCCGC
AACTCGCGGGCAAGACGCAGGCGATTCCCGGCCAGATCAATCGTCAATGGATGCAGGCGGACCGGCCGGGCGTCTATCGC
GGGCAGTGCACGCAATTCTGCGGCGCGCAGCACGCGCAGATGGGCTTCGAAATCGTCGCCGAACCGCCCGACGCGTACCG
GCGCTGGTACGCGTCGCAGCGGCGCGGCGCCGAAGCGCCGCGCACGGCCGACGCGCTGCGCGGCCAGCGAATCTTCGCCG
ATCGCTGCGCGGGCTGCCACGCGGTGCGCGGCACCGGCGCGGCGGGCACGCAGGCGCCCGATCTCACGCATGTCGGCGCG
CGCCGCCTGCTCGCGGCGGGCGCGCTCGCGAACACGCCGGACGAACTGCGCCGCTGGATCGCCGATGCGCAGCAGGTGAA
GCCACAGTCGCTGATGCCGTCGATCCGGCTCGACCCCGCGCAGCAGCGCGACCTGTCCGCGTATCTGGCAACGCTGCGAT
GA

Upstream 100 bases:

>100_bases
TCCGGCCGCGCGGACCGGACGCGCGACGAGCCGGACGGCGACGCATGACGCGCGCGCGGCGCACGGACCGAACGAGCCTC
ACGCAATGAACGGCGCAAAC

Downstream 100 bases:

>100_bases
ACGACGGAGACCGCCGATGAGCACCGCCGACACCGATCGCCGCGCCCGCCTCGCCTACCGCCGCGCGCCGGAGATCGGCG
AAGCGGGCCCGGGCTCGGCC

Product: putative cytochrome c oxidase polypeptide II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MSVKPAQRPERGFAKTRRRTAAYRPAATRAAGVARAAGAATPPLAAALHAAAAHAQAHAAQPAALPLAYVFDSAGPAARP
VLILGWALLALCTSVCVVIAVLLALALFRRRAATAGLTERGGLGFVYAGTAISTALLLAALVYMLWVLAAVAKPPRPPAV
TIAVTAYDWWWKADYGGGPPDGFTTANELHVPVGEPVLIELRSADVIHAFWAPQLAGKTQAIPGQINRQWMQADRPGVYR
GQCTQFCGAQHAQMGFEIVAEPPDAYRRWYASQRRGAEAPRTADALRGQRIFADRCAGCHAVRGTGAAGTQAPDLTHVGA
RRLLAAGALANTPDELRRWIADAQQVKPQSLMPSIRLDPAQQRDLSAYLATLR

Sequences:

>Translated_373_residues
MSVKPAQRPERGFAKTRRRTAAYRPAATRAAGVARAAGAATPPLAAALHAAAAHAQAHAAQPAALPLAYVFDSAGPAARP
VLILGWALLALCTSVCVVIAVLLALALFRRRAATAGLTERGGLGFVYAGTAISTALLLAALVYMLWVLAAVAKPPRPPAV
TIAVTAYDWWWKADYGGGPPDGFTTANELHVPVGEPVLIELRSADVIHAFWAPQLAGKTQAIPGQINRQWMQADRPGVYR
GQCTQFCGAQHAQMGFEIVAEPPDAYRRWYASQRRGAEAPRTADALRGQRIFADRCAGCHAVRGTGAAGTQAPDLTHVGA
RRLLAAGALANTPDELRRWIADAQQVKPQSLMPSIRLDPAQQRDLSAYLATLR
>Mature_372_residues
SVKPAQRPERGFAKTRRRTAAYRPAATRAAGVARAAGAATPPLAAALHAAAAHAQAHAAQPAALPLAYVFDSAGPAARPV
LILGWALLALCTSVCVVIAVLLALALFRRRAATAGLTERGGLGFVYAGTAISTALLLAALVYMLWVLAAVAKPPRPPAVT
IAVTAYDWWWKADYGGGPPDGFTTANELHVPVGEPVLIELRSADVIHAFWAPQLAGKTQAIPGQINRQWMQADRPGVYRG
QCTQFCGAQHAQMGFEIVAEPPDAYRRWYASQRRGAEAPRTADALRGQRIFADRCAGCHAVRGTGAAGTQAPDLTHVGAR
RLLAAGALANTPDELRRWIADAQQVKPQSLMPSIRLDPAQQRDLSAYLATLR

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI251831110, Length=115, Percent_Identity=33.9130434782609, Blast_Score=79, Evalue=8e-15,
Organism=Escherichia coli, GI1786635, Length=157, Percent_Identity=28.0254777070064, Blast_Score=72, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6226540, Length=166, Percent_Identity=27.1084337349398, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2; PF02790 COX2_TM; PF00034 Cytochrom_C [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 39601; Mature: 39470

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: PS00078 COX2 ; PS50857 COX2_CUA ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKPAQRPERGFAKTRRRTAAYRPAATRAAGVARAAGAATPPLAAALHAAAAHAQAHAA
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
QPAALPLAYVFDSAGPAARPVLILGWALLALCTSVCVVIAVLLALALFRRRAATAGLTER
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GGLGFVYAGTAISTALLLAALVYMLWVLAAVAKPPRPPAVTIAVTAYDWWWKADYGGGPP
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCCCCC
DGFTTANELHVPVGEPVLIELRSADVIHAFWAPQLAGKTQAIPGQINRQWMQADRPGVYR
CCCCCCCEEECCCCCCEEEEECCCCEEHHHHCHHHCCCCCCCCCHHHHHHHHCCCCCCCC
GQCTQFCGAQHAQMGFEIVAEPPDAYRRWYASQRRGAEAPRTADALRGQRIFADRCAGCH
CHHHHHHCCHHHHCCCEEEECCCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHCCCH
AVRGTGAAGTQAPDLTHVGARRLLAAGALANTPDELRRWIADAQQVKPQSLMPSIRLDPA
HCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCH
QQRDLSAYLATLR
HHHHHHHHHHHCC
>Mature Secondary Structure 
SVKPAQRPERGFAKTRRRTAAYRPAATRAAGVARAAGAATPPLAAALHAAAAHAQAHAA
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
QPAALPLAYVFDSAGPAARPVLILGWALLALCTSVCVVIAVLLALALFRRRAATAGLTER
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GGLGFVYAGTAISTALLLAALVYMLWVLAAVAKPPRPPAVTIAVTAYDWWWKADYGGGPP
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCCCCC
DGFTTANELHVPVGEPVLIELRSADVIHAFWAPQLAGKTQAIPGQINRQWMQADRPGVYR
CCCCCCCEEECCCCCCEEEEECCCCEEHHHHCHHHCCCCCCCCCHHHHHHHHCCCCCCCC
GQCTQFCGAQHAQMGFEIVAEPPDAYRRWYASQRRGAEAPRTADALRGQRIFADRCAGCH
CHHHHHHCCHHHHCCCEEEECCCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHCCCH
AVRGTGAAGTQAPDLTHVGARRLLAAGALANTPDELRRWIADAQQVKPQSLMPSIRLDPA
HCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCH
QQRDLSAYLATLR
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7678007 [H]