| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718361
Identifier: 53718361
GI number: 53718361
Start: 827463
End: 828095
Strand: Reverse
Name: 53718361
Synonym: BPSL0721
Alternate gene names: NA
Gene position: 828095-827463 (Counterclockwise)
Preceding gene: 53718362
Following gene: 53718360
Centisome position: 20.32
GC content: 75.04
Gene sequence:
>633_bases ATGATGCGATCTCGAACGAACGGCGCCATCGATACGCCGCGCGCGCGACGCGCGCAACACCGGCTGCTGTGGGCGTGCAT GCTGGCGGGGCTGGTCGGCGCCCCCGCGCTGTGGATGTCGCAGATGCTCGTGTCGGAAACGCTGTCGTCGGTCGCGTGCG ATCCGCTCGGCGTGCCGCACGCGCTGCCGCAGTGGCCGCAGTTCGCCGGCCGGCTCGCGCTGTTCGCCGCGCTCGCGCTG CTGCTCGGCATCGCGTGCGCCGCGCTCGCGTGGCGCGGCTTGCGCCGCAGCGCGGCCGCAGCGCCGCGAGCCGCGCGCGA TGCCGACGCCGCGCCCCCCGGTCCCCCCGCGCCCGCCTCGCCCGCCTCGCCGCGCACGACAGATCGCGCGCCGGCGCATG CCCCGGCGCGCGATCCGCTCGATGCCGCGAACCGCGAACCGAACGCCCCGGGCGAGCCGGACGAATTGGGCGAATTGGGC GAACCCGACGTCCCGGACGAGCCGGACGATGCCGCGTCGAAGACCCGCTTCATCGCCGTCTGCGGGCTGCTCGCCGGCGT CGGCTTCGCACTCGGGCTGATCTTCACCGGGCTCGCGGTGATCTTCGTGGAGCCGTGTCACCCATGGCGCTGA
Upstream 100 bases:
>100_bases CGGCGCTGTCGATCGGCGGGCTCTACTGGCACTTCGTCGACATCGTCTGGCTCTTCATCTTCACGACGCTCTACCTCACG CCGATCTGGCTCAGGGGGCG
Downstream 100 bases:
>100_bases TCGCCGCGCGCGGGCCGCGCCTGCGCTTTTCCGCAGCCGCCGCGACCGCCGCGACGGCCTCCGCGCTCGTCATGGCTGCG CTGCTCGGCGGCTGCGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MMRSRTNGAIDTPRARRAQHRLLWACMLAGLVGAPALWMSQMLVSETLSSVACDPLGVPHALPQWPQFAGRLALFAALAL LLGIACAALAWRGLRRSAAAAPRAARDADAAPPGPPAPASPASPRTTDRAPAHAPARDPLDAANREPNAPGEPDELGELG EPDVPDEPDDAASKTRFIAVCGLLAGVGFALGLIFTGLAVIFVEPCHPWR
Sequences:
>Translated_210_residues MMRSRTNGAIDTPRARRAQHRLLWACMLAGLVGAPALWMSQMLVSETLSSVACDPLGVPHALPQWPQFAGRLALFAALAL LLGIACAALAWRGLRRSAAAAPRAARDADAAPPGPPAPASPASPRTTDRAPAHAPARDPLDAANREPNAPGEPDELGELG EPDVPDEPDDAASKTRFIAVCGLLAGVGFALGLIFTGLAVIFVEPCHPWR >Mature_210_residues MMRSRTNGAIDTPRARRAQHRLLWACMLAGLVGAPALWMSQMLVSETLSSVACDPLGVPHALPQWPQFAGRLALFAALAL LLGIACAALAWRGLRRSAAAAPRAARDADAAPPGPPAPASPASPRTTDRAPAHAPARDPLDAANREPNAPGEPDELGELG EPDVPDEPDDAASKTRFIAVCGLLAGVGFALGLIFTGLAVIFVEPCHPWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21936; Mature: 21936
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRSRTNGAIDTPRARRAQHRLLWACMLAGLVGAPALWMSQMLVSETLSSVACDPLGVPH CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCC ALPQWPQFAGRLALFAALALLLGIACAALAWRGLRRSAAAAPRAARDADAAPPGPPAPAS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCC PASPRTTDRAPAHAPARDPLDAANREPNAPGEPDELGELGEPDVPDEPDDAASKTRFIAV CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHH CGLLAGVGFALGLIFTGLAVIFVEPCHPWR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MMRSRTNGAIDTPRARRAQHRLLWACMLAGLVGAPALWMSQMLVSETLSSVACDPLGVPH CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCC ALPQWPQFAGRLALFAALALLLGIACAALAWRGLRRSAAAAPRAARDADAAPPGPPAPAS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCC PASPRTTDRAPAHAPARDPLDAANREPNAPGEPDELGELGEPDVPDEPDDAASKTRFIAV CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHH CGLLAGVGFALGLIFTGLAVIFVEPCHPWR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA