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The map label for this gene is glpR [H]

Identifier: 53718334

GI number: 53718334

Start: 787140

End: 787976

Strand: Reverse

Name: glpR [H]

Synonym: BPSL0691

Alternate gene names: 53718334

Gene position: 787976-787140 (Counterclockwise)

Preceding gene: 53718338

Following gene: 53718333

Centisome position: 19.34

GC content: 65.83

Gene sequence:

>837_bases
ATGCGGATTCGCCGTCCCCGTTTACCGTCCCACCGAGCCGAACCGACACCCGCGAACATGACACGAGACCCCCGCCTCAC
CCTGAATGCGCGTCAACAGGAATTGCTCGAATGGGTGCAGCGCGACGGCTTCGTCACTGTCGACGATCTCGCCGCCCATT
TCAACGTGACGCCGCAGACGATCCGTCGCGACGTCAACTGGCTCGCCGATCTGAACCTGCTGCGCCGCTACCACGGCGGC
GCGAGCCTGCCGACGAGCTCGGAGAACGTGTCGTACACCGCGCGCCAGCGGATGTTCCACGACGAGAAGCGCAGGATCGC
GGCGCTCGCCGCCTCGCACATCCCCGATCAGGCGTCCCTGTTCATCAACCTCGGCACGACCACCGAGGAGGTCGCGCGCG
CGCTGAACCGGCATCACGGCTTGCGCGTGATCACCAACAACCTGAACGTCGCGAGCATGATGAGCGGTTATCCGGAATGC
GAGGTGCTGATCACGGGCGGCATCGTGCGGCCGTGGGACAAGGGCATCGTCGGCGAGCTCGCGATCGACTTCATCCGCCA
GTTCAAGGTCGACTACGCGATCATCGGCACGTCGTCGATCGAGAGCGACGGCACGCTGCGCGATTTCGACACGCGCGAGG
TGCGCGTCGCCGAGGCGATCATCCAGCATGCGCGCACCGTCTATCTCGTCACCGACCATTCGAAATTCGGCCGCCCGGCG
CTCGTGCGGCAGGGGCATCTGAGCCAGATCCACGCGCTGTTCACCGACAAGCCGCTGCCCGACGACATGGCCGAGACGCT
CGTCCAGGCGGGCACGCAGGTCTACGTCGCCGACTGA

Upstream 100 bases:

>100_bases
ATGAATGCGCGCAAGACATGAATCGAGTCTAGCCGAGACCGGCGCGCACGCGAGGCGGCGCGCCGGCGCGCCCGGCGCGG
GGCCGCGGACAGCCCTTACA

Downstream 100 bases:

>100_bases
GCGGCTGCCCGCGCGCGGCGCCGCGCGATGCTGCGTCGCACCCCGAACTTCAAGTGAAATCACGGAATGGCCGCACCGGT
GCAACCGCCTGAGGATTTCC

Product: DeoR family glycerol-3-phosphate regulon repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MRIRRPRLPSHRAEPTPANMTRDPRLTLNARQQELLEWVQRDGFVTVDDLAAHFNVTPQTIRRDVNWLADLNLLRRYHGG
ASLPTSSENVSYTARQRMFHDEKRRIAALAASHIPDQASLFINLGTTTEEVARALNRHHGLRVITNNLNVASMMSGYPEC
EVLITGGIVRPWDKGIVGELAIDFIRQFKVDYAIIGTSSIESDGTLRDFDTREVRVAEAIIQHARTVYLVTDHSKFGRPA
LVRQGHLSQIHALFTDKPLPDDMAETLVQAGTQVYVAD

Sequences:

>Translated_278_residues
MRIRRPRLPSHRAEPTPANMTRDPRLTLNARQQELLEWVQRDGFVTVDDLAAHFNVTPQTIRRDVNWLADLNLLRRYHGG
ASLPTSSENVSYTARQRMFHDEKRRIAALAASHIPDQASLFINLGTTTEEVARALNRHHGLRVITNNLNVASMMSGYPEC
EVLITGGIVRPWDKGIVGELAIDFIRQFKVDYAIIGTSSIESDGTLRDFDTREVRVAEAIIQHARTVYLVTDHSKFGRPA
LVRQGHLSQIHALFTDKPLPDDMAETLVQAGTQVYVAD
>Mature_278_residues
MRIRRPRLPSHRAEPTPANMTRDPRLTLNARQQELLEWVQRDGFVTVDDLAAHFNVTPQTIRRDVNWLADLNLLRRYHGG
ASLPTSSENVSYTARQRMFHDEKRRIAALAASHIPDQASLFINLGTTTEEVARALNRHHGLRVITNNLNVASMMSGYPEC
EVLITGGIVRPWDKGIVGELAIDFIRQFKVDYAIIGTSSIESDGTLRDFDTREVRVAEAIIQHARTVYLVTDHSKFGRPA
LVRQGHLSQIHALFTDKPLPDDMAETLVQAGTQVYVAD

Specific function: Repressor of the glycerol-3-phosphate regulon [H]

COG id: COG1349

COG function: function code KG; Transcriptional regulators of sugar metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789829, Length=247, Percent_Identity=45.748987854251, Blast_Score=232, Evalue=2e-62,
Organism=Escherichia coli, GI87082344, Length=236, Percent_Identity=40.6779661016949, Blast_Score=194, Evalue=5e-51,
Organism=Escherichia coli, GI1788069, Length=230, Percent_Identity=30.8695652173913, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI1790753, Length=249, Percent_Identity=27.710843373494, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1789519, Length=249, Percent_Identity=27.710843373494, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI226510968, Length=248, Percent_Identity=29.8387096774194, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1789059, Length=248, Percent_Identity=29.0322580645161, Blast_Score=101, Evalue=7e-23,
Organism=Escherichia coli, GI1787540, Length=233, Percent_Identity=30.0429184549356, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787063, Length=257, Percent_Identity=29.1828793774319, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1789170, Length=231, Percent_Identity=23.8095238095238, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1790635, Length=144, Percent_Identity=31.9444444444444, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014036
- InterPro:   IPR001034
- InterPro:   IPR018356
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00455 DeoR; PF08220 HTH_DeoR [H]

EC number: NA

Molecular weight: Translated: 31337; Mature: 31337

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS00894 HTH_DEOR_1 ; PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRRPRLPSHRAEPTPANMTRDPRLTLNARQQELLEWVQRDGFVTVDDLAAHFNVTPQT
CCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCEEHHHHHHHCCCCHHH
IRRDVNWLADLNLLRRYHGGASLPTSSENVSYTARQRMFHDEKRRIAALAASHIPDQASL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
FINLGTTTEEVARALNRHHGLRVITNNLNVASMMSGYPECEVLITGGIVRPWDKGIVGEL
EEECCCCHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCEEEEEECCCCCCCCCCHHHHH
AIDFIRQFKVDYAIIGTSSIESDGTLRDFDTREVRVAEAIIQHARTVYLVTDHSKFGRPA
HHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCH
LVRQGHLSQIHALFTDKPLPDDMAETLVQAGTQVYVAD
HHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEC
>Mature Secondary Structure
MRIRRPRLPSHRAEPTPANMTRDPRLTLNARQQELLEWVQRDGFVTVDDLAAHFNVTPQT
CCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCEEHHHHHHHCCCCHHH
IRRDVNWLADLNLLRRYHGGASLPTSSENVSYTARQRMFHDEKRRIAALAASHIPDQASL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
FINLGTTTEEVARALNRHHGLRVITNNLNVASMMSGYPECEVLITGGIVRPWDKGIVGEL
EEECCCCHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCEEEEEECCCCCCCCCCHHHHH
AIDFIRQFKVDYAIIGTSSIESDGTLRDFDTREVRVAEAIIQHARTVYLVTDHSKFGRPA
HHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCH
LVRQGHLSQIHALFTDKPLPDDMAETLVQAGTQVYVAD
HHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8752340; 10984043 [H]