| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is asnB [H]
Identifier: 53718325
GI number: 53718325
Start: 776411
End: 777943
Strand: Reverse
Name: asnB [H]
Synonym: BPSL0682
Alternate gene names: 53718325
Gene position: 777943-776411 (Counterclockwise)
Preceding gene: 53718326
Following gene: 53718324
Centisome position: 19.09
GC content: 64.06
Gene sequence:
>1533_bases ATGTGCGGAATTGGGGCCATTTTCAGCACGCAGCGCGCGTCGGTCGACGGCATCGAGCGCTCGCTGAGCGCGTTGATGTC GAAGATCGCGCACCGCGGCGACGCGTCGCGCTTCAACGAAAACCTGATCCGGGAGCGCTTCGGCCTCGCGACGAACCGCC TCGCGATCGTCGAGCGCGACCATGCGCGCCAACCGGTGTCCGATCACGAGCGCGACCTGCACGTCGTGCTCAACGGGCAG ATCTACAACTACAAGGAACTGCGCGACGAGCTCGCCGCGCGCGGCCACCGCTTCAGCCATGCGGGCGACGCCGAGGTGCT GTTGCGCGCGTACCTCGAGTACGGCCCGTCGTTCGCGACGAAGCTCGACGGCATGTTCAGCTTCGTGCTGTTCGACAACC TGAACGGAAAATTCCTGATCGGGCGCGACCACGTCGGCATCAAGCCGCTCTATTACGCGCAGCGCGACGGCGTCTGGTAC GTCGCGTCGGAACTCAAGGCGCTCACGCACGTGAACGCGCGAATCGAGACGCTCGCGCCCGGCACGCTGTTCGACGGCAA GGAGACGATCAGGTACGTGTCGTACGACGCCAGCCGCCCGGTGAGCCGCGACAGCTTCGACGAAGCGAAGGCGCGCGTGC GCACGCTGCTCGAGGAATCGGTGCGCCGCCGCGTCGACACCGACCTGCCGATCTGCGTGATGTTCAGCGGCGGCATCGAC AGCGCGATCGTGCTGCAGCTCGCGCACCGCTATCACCCGGACGTGACCGCGATCTCGTTCGGCCTGCCCGGCTCGAACGA CATCGAGATCGCGCACCGCTACTGCGCCGAGCACGGCATCCGCCACGTGATCTACACGTTCACGAAGCAGGACCTGCTCG AGAACATCGACGACGCGGTCTATTACGGCGAATTCTTCGAGAAGATCGACGCGATCGATTCGGCGATCGCGCATTTCGGC TACTACATCGCGAACAAGCTCGGCTTGAAGGTTGCGCTCTGCGGCGAAGGCAGCGACGAGATCTTCGGCGGCTACGATCT GTTCAAGACGCACGCGCAGCCCGGCGCGCTGTCGCTCTATCGGCTCAACAACCTGCACCGCACCGATCTGCAGCGCGTCG ATCGCGCGAGCATGCGCAATACGGTCGAGGCGCGGGTGCCGTTCATGGACGCCGAGCTGATCGACTACGTGCTGAGCCTC GACTTCTCGTACAAACTGCACGGCGGCGTCGAAAAGCATATCCTGCGCGAGGCGTTTCGCGACGTGCTGCCGGGCTACAT CATCGATCGCCCGAAAATCAGGATGCCCGACGGCAGCGGCGTGAAGAACGTCATCATCGACCACATCGACAGCCTCGGCG ACGCGCCGCCTGACGATGCGGCAAGGCGGCTCGGCGAAATCGGGCTGTCCGATCGCTCGGCGCTCTTCTTCGCGCGGAAG TACCTGGAGTGCAACTTCCCGTTTCCGACGCAGCGCTTCAAGCAGGCCGGCAAGGATTTTTCGGAATCCGGATATTTCGA CTTCATCTCATGA
Upstream 100 bases:
>100_bases ATCGGCGCGAACGTCGACGGGCTGATCTACCCGAACGTCGCCGCGGCGCGCGCATGAACGCGGCCCGCGCCATCGAATCC ACTCACGAGAGAGAAATGAC
Downstream 100 bases:
>100_bases CGCACGGGCGCGGCGCCTCGCCGCGCCCGTCCGGGGAATGCCCATGAAGACTTTTCTGTTCGTCGAAGCCCGCCCGATCG AATGCGCGGGCATCGGCTAC
Product: putative asparagine synthetase B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MCGIGAIFSTQRASVDGIERSLSALMSKIAHRGDASRFNENLIRERFGLATNRLAIVERDHARQPVSDHERDLHVVLNGQ IYNYKELRDELAARGHRFSHAGDAEVLLRAYLEYGPSFATKLDGMFSFVLFDNLNGKFLIGRDHVGIKPLYYAQRDGVWY VASELKALTHVNARIETLAPGTLFDGKETIRYVSYDASRPVSRDSFDEAKARVRTLLEESVRRRVDTDLPICVMFSGGID SAIVLQLAHRYHPDVTAISFGLPGSNDIEIAHRYCAEHGIRHVIYTFTKQDLLENIDDAVYYGEFFEKIDAIDSAIAHFG YYIANKLGLKVALCGEGSDEIFGGYDLFKTHAQPGALSLYRLNNLHRTDLQRVDRASMRNTVEARVPFMDAELIDYVLSL DFSYKLHGGVEKHILREAFRDVLPGYIIDRPKIRMPDGSGVKNVIIDHIDSLGDAPPDDAARRLGEIGLSDRSALFFARK YLECNFPFPTQRFKQAGKDFSESGYFDFIS
Sequences:
>Translated_510_residues MCGIGAIFSTQRASVDGIERSLSALMSKIAHRGDASRFNENLIRERFGLATNRLAIVERDHARQPVSDHERDLHVVLNGQ IYNYKELRDELAARGHRFSHAGDAEVLLRAYLEYGPSFATKLDGMFSFVLFDNLNGKFLIGRDHVGIKPLYYAQRDGVWY VASELKALTHVNARIETLAPGTLFDGKETIRYVSYDASRPVSRDSFDEAKARVRTLLEESVRRRVDTDLPICVMFSGGID SAIVLQLAHRYHPDVTAISFGLPGSNDIEIAHRYCAEHGIRHVIYTFTKQDLLENIDDAVYYGEFFEKIDAIDSAIAHFG YYIANKLGLKVALCGEGSDEIFGGYDLFKTHAQPGALSLYRLNNLHRTDLQRVDRASMRNTVEARVPFMDAELIDYVLSL DFSYKLHGGVEKHILREAFRDVLPGYIIDRPKIRMPDGSGVKNVIIDHIDSLGDAPPDDAARRLGEIGLSDRSALFFARK YLECNFPFPTQRFKQAGKDFSESGYFDFIS >Mature_510_residues MCGIGAIFSTQRASVDGIERSLSALMSKIAHRGDASRFNENLIRERFGLATNRLAIVERDHARQPVSDHERDLHVVLNGQ IYNYKELRDELAARGHRFSHAGDAEVLLRAYLEYGPSFATKLDGMFSFVLFDNLNGKFLIGRDHVGIKPLYYAQRDGVWY VASELKALTHVNARIETLAPGTLFDGKETIRYVSYDASRPVSRDSFDEAKARVRTLLEESVRRRVDTDLPICVMFSGGID SAIVLQLAHRYHPDVTAISFGLPGSNDIEIAHRYCAEHGIRHVIYTFTKQDLLENIDDAVYYGEFFEKIDAIDSAIAHFG YYIANKLGLKVALCGEGSDEIFGGYDLFKTHAQPGALSLYRLNNLHRTDLQRVDRASMRNTVEARVPFMDAELIDYVLSL DFSYKLHGGVEKHILREAFRDVLPGYIIDRPKIRMPDGSGVKNVIIDHIDSLGDAPPDDAARRLGEIGLSDRSALFFARK YLECNFPFPTQRFKQAGKDFSESGYFDFIS
Specific function: Asparagine biosynthesis. [C]
COG id: COG0367
COG function: function code E; Asparagine synthase (glutamine-hydrolyzing)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]
Homologues:
Organism=Homo sapiens, GI168229248, Length=511, Percent_Identity=30.7240704500978, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI168229252, Length=511, Percent_Identity=30.7240704500978, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI168229250, Length=511, Percent_Identity=30.7240704500978, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI296010848, Length=483, Percent_Identity=30.2277432712215, Blast_Score=154, Evalue=3e-37, Organism=Homo sapiens, GI296010852, Length=406, Percent_Identity=30.2955665024631, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI296010850, Length=406, Percent_Identity=30.2955665024631, Blast_Score=132, Evalue=1e-30, Organism=Escherichia coli, GI1786889, Length=528, Percent_Identity=32.9545454545455, Blast_Score=230, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17560178, Length=479, Percent_Identity=30.6889352818372, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI71993933, Length=482, Percent_Identity=30.7053941908714, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI25147557, Length=482, Percent_Identity=30.7053941908714, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI25147560, Length=214, Percent_Identity=32.7102803738318, Blast_Score=90, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6321563, Length=501, Percent_Identity=30.1397205588822, Blast_Score=196, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6325403, Length=496, Percent_Identity=30.241935483871, Blast_Score=196, Evalue=5e-51, Organism=Drosophila melanogaster, GI45553209, Length=536, Percent_Identity=29.4776119402985, Blast_Score=179, Evalue=5e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006426 - InterPro: IPR001962 - InterPro: IPR017932 - InterPro: IPR014729 [H]
Pfam domain/function: PF00733 Asn_synthase [H]
EC number: =6.3.5.4 [H]
Molecular weight: Translated: 57538; Mature: 57538
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGIGAIFSTQRASVDGIERSLSALMSKIAHRGDASRFNENLIRERFGLATNRLAIVERD CCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECC HARQPVSDHERDLHVVLNGQIYNYKELRDELAARGHRFSHAGDAEVLLRAYLEYGPSFAT CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHH KLDGMFSFVLFDNLNGKFLIGRDHVGIKPLYYAQRDGVWYVASELKALTHVNARIETLAP HHHHHEEEEEEECCCCEEEEECCCCCCCCEEEECCCCEEEHHHHHHHHHHHCCHHEECCC GTLFDGKETIRYVSYDASRPVSRDSFDEAKARVRTLLEESVRRRVDTDLPICVMFSGGID CCCCCCHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC SAIVLQLAHRYHPDVTAISFGLPGSNDIEIAHRYCAEHGIRHVIYTFTKQDLLENIDDAV HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH YYGEFFEKIDAIDSAIAHFGYYIANKLGLKVALCGEGSDEIFGGYDLFKTHAQPGALSLY HHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCHHHHHHCCCCCCEEEE RLNNLHRTDLQRVDRASMRNTVEARVPFMDAELIDYVLSLDFSYKLHGGVEKHILREAFR HHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHH DVLPGYIIDRPKIRMPDGSGVKNVIIDHIDSLGDAPPDDAARRLGEIGLSDRSALFFARK HHCCCCEECCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHH YLECNFPFPTQRFKQAGKDFSESGYFDFIS HHCCCCCCCHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MCGIGAIFSTQRASVDGIERSLSALMSKIAHRGDASRFNENLIRERFGLATNRLAIVERD CCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECC HARQPVSDHERDLHVVLNGQIYNYKELRDELAARGHRFSHAGDAEVLLRAYLEYGPSFAT CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHH KLDGMFSFVLFDNLNGKFLIGRDHVGIKPLYYAQRDGVWYVASELKALTHVNARIETLAP HHHHHEEEEEEECCCCEEEEECCCCCCCCEEEECCCCEEEHHHHHHHHHHHCCHHEECCC GTLFDGKETIRYVSYDASRPVSRDSFDEAKARVRTLLEESVRRRVDTDLPICVMFSGGID CCCCCCHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC SAIVLQLAHRYHPDVTAISFGLPGSNDIEIAHRYCAEHGIRHVIYTFTKQDLLENIDDAV HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH YYGEFFEKIDAIDSAIAHFGYYIANKLGLKVALCGEGSDEIFGGYDLFKTHAQPGALSLY HHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCHHHHHHCCCCCCEEEE RLNNLHRTDLQRVDRASMRNTVEARVPFMDAELIDYVLSLDFSYKLHGGVEKHILREAFR HHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHH DVLPGYIIDRPKIRMPDGSGVKNVIIDHIDSLGDAPPDDAARRLGEIGLSDRSALFFARK HHCCCCEECCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHH YLECNFPFPTQRFKQAGKDFSESGYFDFIS HHCCCCCCCHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1973930; 8905232; 9278503; 10587437 [H]