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The map label for this gene is corC [H]

Identifier: 53718313

GI number: 53718313

Start: 762676

End: 763563

Strand: Reverse

Name: corC [H]

Synonym: BPSL0670

Alternate gene names: 53718313

Gene position: 763563-762676 (Counterclockwise)

Preceding gene: 53718314

Following gene: 53718312

Centisome position: 18.74

GC content: 63.96

Gene sequence:

>888_bases
ATGAACGATTCGTATCCCAGTCGAAAATCCTCCGACAAACCGCATGAAAAACGCTCGCTGCTCGAGCGTCTGACCGACAT
CATCTCGCCCGAGCCCGACTCGCGGGCCGAGCTTCTCGAAATCCTGCAGGATGCGCACGAACGCAACCTGATCGACGCCG
ATTCGCTGTCGATGATCGAGGGCGTGTTCCAGGTATCCGACCTGTGCGCACGCGACATCATGGTGCCCCGTGCGCAGATG
GACGCGCTCAACATCGCCGACAAGCCCGAGGATTTCATCCCGTTCGTGCTCGAAAAGGCACACTCGCGGTACCCGGTATA
CGAAGACAACCGCGACAACGTGATCGGCGTGCTGCTCGCGAAGGATCTGCTGCGCTTCTACGCGGAAGAGGAATTCGACG
TGCGCGGCATGCTGCGCCCCGCCGTCTTCATCCCCGAATCGAAGCGGCTGAACGTGCTGCTGCACGACTTCCGCGTGAAC
CGCAACCATCTCGCGATCGTCGTCGACGAGTACGGCGGCGTCGCCGGCCTCATCACGATCGAGGACGTGCTCGAGCAGAT
CGTCGGCGACATCGAGGACGAATACGACTTCGACGAGGAAGCCGGCAACATCATCGCCGCGCCCGACGGCCGCTACCGCG
TGCGCGCGCTGACCGAGATCGAGCAGTTCAACGAAACGTTCGGCACCGATTTCTCCGACGACGAAGTCGACACGATCGGC
GGCCTCATCACGCACCATTTCGGCCGCGTCCCGCATCGCGGCGAGAAGGTGCGCCTGGGCGAGCTGCTGTTCGAGATCCA
GCGCGGCGACGCCCGCCAGATTCACGTGCTGCTTGTGCGCCGCGCGCCGCTCGCCGGCCGGCGCAGCGGCTCGGCGGGCG
AAGACTGA

Upstream 100 bases:

>100_bases
TTCGGCCCGCGCGCCGCCCGCCGACACGGACGCGCCACGACCTTGGTGTATCCTTGCCTATTCCGTGACAGCGCGCTCCC
GATTCGCGGGGCGCACCACC

Downstream 100 bases:

>100_bases
CGCACCGCCGCGCCCTCTCAACCCGTTCCTTCGAAGCAACGCATGGCCGAACCGATCTCGACCCGCTCGCAATCGAGCGT
CTCCTCAACGGCCGCCGGCC

Product: putative cation transporter efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MNDSYPSRKSSDKPHEKRSLLERLTDIISPEPDSRAELLEILQDAHERNLIDADSLSMIEGVFQVSDLCARDIMVPRAQM
DALNIADKPEDFIPFVLEKAHSRYPVYEDNRDNVIGVLLAKDLLRFYAEEEFDVRGMLRPAVFIPESKRLNVLLHDFRVN
RNHLAIVVDEYGGVAGLITIEDVLEQIVGDIEDEYDFDEEAGNIIAAPDGRYRVRALTEIEQFNETFGTDFSDDEVDTIG
GLITHHFGRVPHRGEKVRLGELLFEIQRGDARQIHVLLVRRAPLAGRRSGSAGED

Sequences:

>Translated_295_residues
MNDSYPSRKSSDKPHEKRSLLERLTDIISPEPDSRAELLEILQDAHERNLIDADSLSMIEGVFQVSDLCARDIMVPRAQM
DALNIADKPEDFIPFVLEKAHSRYPVYEDNRDNVIGVLLAKDLLRFYAEEEFDVRGMLRPAVFIPESKRLNVLLHDFRVN
RNHLAIVVDEYGGVAGLITIEDVLEQIVGDIEDEYDFDEEAGNIIAAPDGRYRVRALTEIEQFNETFGTDFSDDEVDTIG
GLITHHFGRVPHRGEKVRLGELLFEIQRGDARQIHVLLVRRAPLAGRRSGSAGED
>Mature_295_residues
MNDSYPSRKSSDKPHEKRSLLERLTDIISPEPDSRAELLEILQDAHERNLIDADSLSMIEGVFQVSDLCARDIMVPRAQM
DALNIADKPEDFIPFVLEKAHSRYPVYEDNRDNVIGVLLAKDLLRFYAEEEFDVRGMLRPAVFIPESKRLNVLLHDFRVN
RNHLAIVVDEYGGVAGLITIEDVLEQIVGDIEDEYDFDEEAGNIIAAPDGRYRVRALTEIEQFNETFGTDFSDDEVDTIG
GLITHHFGRVPHRGEKVRLGELLFEIQRGDARQIHVLLVRRAPLAGRRSGSAGED

Specific function: Plays a role in the transport of magnesium and cobalt ions [H]

COG id: COG4535

COG function: function code P; Putative Mg2+ and Co2+ transporter CorC

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=229, Percent_Identity=30.1310043668122, Blast_Score=118, Evalue=7e-27,
Organism=Homo sapiens, GI94681046, Length=180, Percent_Identity=29.4444444444444, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI40068053, Length=182, Percent_Identity=27.4725274725275, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI40068055, Length=182, Percent_Identity=27.4725274725275, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1786879, Length=280, Percent_Identity=44.2857142857143, Blast_Score=211, Evalue=6e-56,
Organism=Escherichia coli, GI145693175, Length=263, Percent_Identity=28.8973384030418, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI87082033, Length=244, Percent_Identity=27.4590163934426, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1788119, Length=231, Percent_Identity=29.8701298701299, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1790664, Length=229, Percent_Identity=25.764192139738, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC [H]

EC number: NA

Molecular weight: Translated: 33463; Mature: 33463

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDSYPSRKSSDKPHEKRSLLERLTDIISPEPDSRAELLEILQDAHERNLIDADSLSMIE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
GVFQVSDLCARDIMVPRAQMDALNIADKPEDFIPFVLEKAHSRYPVYEDNRDNVIGVLLA
HHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHH
KDLLRFYAEEEFDVRGMLRPAVFIPESKRLNVLLHDFRVNRNHLAIVVDEYGGVAGLITI
HHHHHHHHCCCCCHHHHCCCEEECCCCCCCEEEEEEEEECCCEEEEEEECCCCEEEEEEH
EDVLEQIVGDIEDEYDFDEEAGNIIAAPDGRYRVRALTEIEQFNETFGTDFSDDEVDTIG
HHHHHHHHHHHHHHCCCCHHCCCEEECCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHH
GLITHHFGRVPHRGEKVRLGELLFEIQRGDARQIHVLLVRRAPLAGRRSGSAGED
HHHHHHHCCCCCCCCEEHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MNDSYPSRKSSDKPHEKRSLLERLTDIISPEPDSRAELLEILQDAHERNLIDADSLSMIE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
GVFQVSDLCARDIMVPRAQMDALNIADKPEDFIPFVLEKAHSRYPVYEDNRDNVIGVLLA
HHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHH
KDLLRFYAEEEFDVRGMLRPAVFIPESKRLNVLLHDFRVNRNHLAIVVDEYGGVAGLITI
HHHHHHHHCCCCCHHHHCCCEEECCCCCCCEEEEEEEEECCCEEEEEEECCCCEEEEEEH
EDVLEQIVGDIEDEYDFDEEAGNIIAAPDGRYRVRALTEIEQFNETFGTDFSDDEVDTIG
HHHHHHHHHHHHHHCCCCHHCCCEEECCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHH
GLITHHFGRVPHRGEKVRLGELLFEIQRGDARQIHVLLVRRAPLAGRRSGSAGED
HHHHHHHCCCCCCCCEEHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]