| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718259
Identifier: 53718259
GI number: 53718259
Start: 696875
End: 697669
Strand: Reverse
Name: 53718259
Synonym: BPSL0616
Alternate gene names: NA
Gene position: 697669-696875 (Counterclockwise)
Preceding gene: 53718264
Following gene: 53718258
Centisome position: 17.12
GC content: 65.28
Gene sequence:
>795_bases GTGACCTACCGCGAATACAAAGAACCGGCGACGAGGGCCGGGGGCATCATCGAACTGCCGCACCGCACCGACGCGAACCG TTTCCTCGCCTCGCTCGGCGTGGCCGAACGCGCGACGCTCGCGAGCCATCTGCAACTCGTGCATGTGAAGTCGGGCCAGG TGCTGTGCGAACCGGGCATGGCGCTCGAGCATGTGTATCTGCCCGTCACCACCGTGATCTCGATCCAGTACGCATCGTCC GACGGCATGACGCTCGAGATCGCGGAGATCGGCAACGAAGGGATCGTGAGCCCGCAGCTCGTGGGCACCGACGGCGCGTC GCCGTGCCGCGTGATCACGTGCCGCGACGGCTTCTCGTACCGGCTCGGCGCGCGCGTGCTGTCGAACCTGCTCGAGGAAT CGGCGCAAACGCGCCAGGCGATCTTCCGCTGCACGCACCTGCTGATGGCGCAAGCCAAGCAGATCTCGTTCTGCAGCCGC CACCACGTGCTGAAGAACCAGCTTTGCCGCTGGTTCCTGCTCGCCTACGACCGCTCGCGCAGCGTCGAGATCCAGGTGAC GCACAGCATGCTCGCGCAGATGCTGGGGGTGCGCCGCGAAACCGTCACGGATGCGGCCGGCGACATCCAGAAAATGGGGT TGATCCGCCAGTACCGCAGCTCGATCATCCTCGTCGACCTGCCGGGGCTCGATGCGCAATCGTGCGGATGCCACGCGATC ATTCGCGAAGAAATGAAGAAGATTCAGGCCGCGCCGACGAGCGCTTCCGGCACGCTCACCGAATTGCGCAGCTAA
Upstream 100 bases:
>100_bases ATAAAAATCGTACCTGTCTAGCCAGGCAGGAACGGTTGCGCGCGGCGCCGTTCAGGCGCGGCGCCGCTGCTCCGGATCGC CGATCCGGGAAGGACAAGCC
Downstream 100 bases:
>100_bases GCGGCGCCCGCGTCGCGCGCCGCGCATTCGCAAGCGGCGCGCGCCTCGCGCGACACTTTCGCTGGCGCCCCTCTTCGCTC CGTCGCCGCATGCGCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: CRP/FNR Family Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator-Related Protein; Regulatory Protein Crp; Transcriptional Regulator Protein; Regulatory Subunit Of CAMP-Dependent Protein Kinases; Transcription Regulator Crp Family; Transcriptional Regulatory Protein; GntR Family Transcriptional Regulator; Two-Component Response Regulator Protein; Transcriptional Regulator CAP/Crp Family; Transcriptional Regulator Crp/Fnr Family Protein
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTYREYKEPATRAGGIIELPHRTDANRFLASLGVAERATLASHLQLVHVKSGQVLCEPGMALEHVYLPVTTVISIQYASS DGMTLEIAEIGNEGIVSPQLVGTDGASPCRVITCRDGFSYRLGARVLSNLLEESAQTRQAIFRCTHLLMAQAKQISFCSR HHVLKNQLCRWFLLAYDRSRSVEIQVTHSMLAQMLGVRRETVTDAAGDIQKMGLIRQYRSSIILVDLPGLDAQSCGCHAI IREEMKKIQAAPTSASGTLTELRS
Sequences:
>Translated_264_residues MTYREYKEPATRAGGIIELPHRTDANRFLASLGVAERATLASHLQLVHVKSGQVLCEPGMALEHVYLPVTTVISIQYASS DGMTLEIAEIGNEGIVSPQLVGTDGASPCRVITCRDGFSYRLGARVLSNLLEESAQTRQAIFRCTHLLMAQAKQISFCSR HHVLKNQLCRWFLLAYDRSRSVEIQVTHSMLAQMLGVRRETVTDAAGDIQKMGLIRQYRSSIILVDLPGLDAQSCGCHAI IREEMKKIQAAPTSASGTLTELRS >Mature_263_residues TYREYKEPATRAGGIIELPHRTDANRFLASLGVAERATLASHLQLVHVKSGQVLCEPGMALEHVYLPVTTVISIQYASSD GMTLEIAEIGNEGIVSPQLVGTDGASPCRVITCRDGFSYRLGARVLSNLLEESAQTRQAIFRCTHLLMAQAKQISFCSRH HVLKNQLCRWFLLAYDRSRSVEIQVTHSMLAQMLGVRRETVTDAAGDIQKMGLIRQYRSSIILVDLPGLDAQSCGCHAII REEMKKIQAAPTSASGTLTELRS
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29068; Mature: 28937
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYREYKEPATRAGGIIELPHRTDANRFLASLGVAERATLASHLQLVHVKSGQVLCEPGM CCCHHHCCCHHHCCCEEECCCCCCHHHHHHHHCHHHHHHHHHHEEEEEECCCCEEECCCC ALEHVYLPVTTVISIQYASSDGMTLEIAEIGNEGIVSPQLVGTDGASPCRVITCRDGFSY CCHHEEECEEEEEEEEEECCCCCEEEEEECCCCCCCCCEEECCCCCCCEEEEEECCCCCH RLGARVLSNLLEESAQTRQAIFRCTHLLMAQAKQISFCSRHHVLKNQLCRWFLLAYDRSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SVEIQVTHSMLAQMLGVRRETVTDAAGDIQKMGLIRQYRSSIILVDLPGLDAQSCGCHAI CEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHH IREEMKKIQAAPTSASGTLTELRS HHHHHHHHHCCCCCCCCCHHHHCC >Mature Secondary Structure TYREYKEPATRAGGIIELPHRTDANRFLASLGVAERATLASHLQLVHVKSGQVLCEPGM CCHHHCCCHHHCCCEEECCCCCCHHHHHHHHCHHHHHHHHHHEEEEEECCCCEEECCCC ALEHVYLPVTTVISIQYASSDGMTLEIAEIGNEGIVSPQLVGTDGASPCRVITCRDGFSY CCHHEEECEEEEEEEEEECCCCCEEEEEECCCCCCCCCEEECCCCCCCEEEEEECCCCCH RLGARVLSNLLEESAQTRQAIFRCTHLLMAQAKQISFCSRHHVLKNQLCRWFLLAYDRSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SVEIQVTHSMLAQMLGVRRETVTDAAGDIQKMGLIRQYRSSIILVDLPGLDAQSCGCHAI CEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHH IREEMKKIQAAPTSASGTLTELRS HHHHHHHHHCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA