| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718236
Identifier: 53718236
GI number: 53718236
Start: 665003
End: 665440
Strand: Reverse
Name: 53718236
Synonym: BPSL0593
Alternate gene names: NA
Gene position: 665440-665003 (Counterclockwise)
Preceding gene: 53718237
Following gene: 53718235
Centisome position: 16.33
GC content: 66.89
Gene sequence:
>438_bases ATGCCGCCAACGACGCTTCTTTCGACTAATGACGCTGCGCAAGGCAGCGCGGAGACCAACATGAGTTCGTCGGACCTCAT CCAGCCACGCCAGGTTCTCGTCTCGATCGCGAGCGCAACCGCCACCTATACGGCGTTGAGCCCGCACGTGCCCGGGTTCC TGCACGTCGTCGCGCAAGGCGAGGCGCCGCTTCACGTCGGCAACATCCATCTCGCGCACGATCCGGGCTTCGTCGGCGGG GTGCTGCTCGAGGTGGTGGGCATCGCGGGGCGCCCGTCGCCGACGGTGAAGCAGTACCGGACGCCGGCTTACTCGTTCGA GAGCTGCTATCACAGGGAGATCTTCATTCGCGGCGCGAACGGCATCATCCCGGTCAAGGTGGGGCTGTTTCGCCGCGAAG CCGCGCAGGCGGCCGAGGCGGCGCTCGACGCCGACTGA
Upstream 100 bases:
>100_bases CCTCGGGCGGCGGGCCGGCGAACGGCCGCCGACAACGTAATCGCCTGTAATGGATTTCGCCCCGCCGCAGCCATACTGTT CGCTTCACCGGCACCGCCGG
Downstream 100 bases:
>100_bases GCGCACGCGCGACGGCCGTGTGCTTCGTGTTGCCGACGACAACAGAACAGAGAACAGGCATGAACCGGGAACTGCTCACG CACATTCGGGCCGATCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MPPTTLLSTNDAAQGSAETNMSSSDLIQPRQVLVSIASATATYTALSPHVPGFLHVVAQGEAPLHVGNIHLAHDPGFVGG VLLEVVGIAGRPSPTVKQYRTPAYSFESCYHREIFIRGANGIIPVKVGLFRREAAQAAEAALDAD
Sequences:
>Translated_145_residues MPPTTLLSTNDAAQGSAETNMSSSDLIQPRQVLVSIASATATYTALSPHVPGFLHVVAQGEAPLHVGNIHLAHDPGFVGG VLLEVVGIAGRPSPTVKQYRTPAYSFESCYHREIFIRGANGIIPVKVGLFRREAAQAAEAALDAD >Mature_144_residues PPTTLLSTNDAAQGSAETNMSSSDLIQPRQVLVSIASATATYTALSPHVPGFLHVVAQGEAPLHVGNIHLAHDPGFVGGV LLEVVGIAGRPSPTVKQYRTPAYSFESCYHREIFIRGANGIIPVKVGLFRREAAQAAEAALDAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15243; Mature: 15112
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPTTLLSTNDAAQGSAETNMSSSDLIQPRQVLVSIASATATYTALSPHVPGFLHVVAQG CCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCEEEEEECC EAPLHVGNIHLAHDPGFVGGVLLEVVGIAGRPSPTVKQYRTPAYSFESCYHREIFIRGAN CCCEEECEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHCCEEEEEECCC GIIPVKVGLFRREAAQAAEAALDAD CEEEEEHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PPTTLLSTNDAAQGSAETNMSSSDLIQPRQVLVSIASATATYTALSPHVPGFLHVVAQG CCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCEEEEEECC EAPLHVGNIHLAHDPGFVGGVLLEVVGIAGRPSPTVKQYRTPAYSFESCYHREIFIRGAN CCCEEECEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHCCEEEEEECCC GIIPVKVGLFRREAAQAAEAALDAD CEEEEEHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA