| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718231
Identifier: 53718231
GI number: 53718231
Start: 652627
End: 653193
Strand: Reverse
Name: 53718231
Synonym: BPSL0588
Alternate gene names: NA
Gene position: 653193-652627 (Counterclockwise)
Preceding gene: 53718232
Following gene: 53718230
Centisome position: 16.03
GC content: 46.56
Gene sequence:
>567_bases TTGCTCGTAGCTCTGCTGTCGATTATTTCGGCGGCGATATTCGCATGGATCAATTATCAGCGAGAAAGACTTAACCAGAG AATTCATTACGTAAATCTGCGACAACAACACTTCCTGGCATTGCGCGTATGGTCCGATCAGATTTCCGACCTGTTTTCCG AGGTTATTCACTTTTGCGAACTTGATCCGGAGAAGTGTCCTTCCGGCTCGTTTTTCGAGCGACGTAACAAATACCGCATA GCGCTCTCGTCCATGATTGATCGTGGGCGATGGTTCTTTCCGAATCTAAATACAGAGTCGCACGGACAGGGCAAAGAACT GGCATTCCGTGGTTATCGTCAAGATGTACTTAACAGCCTTGTGGACGCCTATAATTCGGTTACGGATATTAATTACGTCA CTCGCTGTCGAAACGACGATTTGAAGAAGCGAATAGTCACTGCGAAAAAGAGGTTTGTAAGCGAGATCCAAAGCATTCTT GATCCTGTTCAGCTTGACCAGGAGTTCATCGATATCACGACGCATGTCACAGGCGTAGACAGGCAAGGAAAGAGCAATAA GGGGTAA
Upstream 100 bases:
>100_bases CTGGATCGTATGAGCGACGTCTTTGTCTGTCTATTCGACTGGATTTGTCCTTTCTAAGGAGTGAATTGTGGACATAAAAG ATGCGATTTCTCTAGCGTCT
Downstream 100 bases:
>100_bases CGCTCCGATCTTTAACTTTCCCGCAGCCGCCGAAACTTTGCATTGAACTGGTCGAGGTAAGAGATTCCACAACCGGGTTT TTGCTCGGCGACGACAGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MLVALLSIISAAIFAWINYQRERLNQRIHYVNLRQQHFLALRVWSDQISDLFSEVIHFCELDPEKCPSGSFFERRNKYRI ALSSMIDRGRWFFPNLNTESHGQGKELAFRGYRQDVLNSLVDAYNSVTDINYVTRCRNDDLKKRIVTAKKRFVSEIQSIL DPVQLDQEFIDITTHVTGVDRQGKSNKG
Sequences:
>Translated_188_residues MLVALLSIISAAIFAWINYQRERLNQRIHYVNLRQQHFLALRVWSDQISDLFSEVIHFCELDPEKCPSGSFFERRNKYRI ALSSMIDRGRWFFPNLNTESHGQGKELAFRGYRQDVLNSLVDAYNSVTDINYVTRCRNDDLKKRIVTAKKRFVSEIQSIL DPVQLDQEFIDITTHVTGVDRQGKSNKG >Mature_188_residues MLVALLSIISAAIFAWINYQRERLNQRIHYVNLRQQHFLALRVWSDQISDLFSEVIHFCELDPEKCPSGSFFERRNKYRI ALSSMIDRGRWFFPNLNTESHGQGKELAFRGYRQDVLNSLVDAYNSVTDINYVTRCRNDDLKKRIVTAKKRFVSEIQSIL DPVQLDQEFIDITTHVTGVDRQGKSNKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21972; Mature: 21972
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVALLSIISAAIFAWINYQRERLNQRIHYVNLRQQHFLALRVWSDQISDLFSEVIHFCE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LDPEKCPSGSFFERRNKYRIALSSMIDRGRWFFPNLNTESHGQGKELAFRGYRQDVLNSL CCHHHCCCCCHHHHCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHH VDAYNSVTDINYVTRCRNDDLKKRIVTAKKRFVSEIQSILDPVQLDQEFIDITTHVTGVD HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RQGKSNKG CCCCCCCC >Mature Secondary Structure MLVALLSIISAAIFAWINYQRERLNQRIHYVNLRQQHFLALRVWSDQISDLFSEVIHFCE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LDPEKCPSGSFFERRNKYRIALSSMIDRGRWFFPNLNTESHGQGKELAFRGYRQDVLNSL CCHHHCCCCCHHHHCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHH VDAYNSVTDINYVTRCRNDDLKKRIVTAKKRFVSEIQSILDPVQLDQEFIDITTHVTGVD HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RQGKSNKG CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA