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The map label for this gene is yoeC [H]

Identifier: 53718230

GI number: 53718230

Start: 651797

End: 652423

Strand: Reverse

Name: yoeC [H]

Synonym: BPSL0587

Alternate gene names: 53718230

Gene position: 652423-651797 (Counterclockwise)

Preceding gene: 53718231

Following gene: 53718228

Centisome position: 16.01

GC content: 59.81

Gene sequence:

>627_bases
ATGGAATCCGAGAATGTCGTCGTTGTCTACCGCGTGCCGTGGAACCAGGGCAAGCTCATCGGACAGAAGCCTCCGTTAAA
GCTTCGGGAAATCTGGGCGATCCGGACGAGACTTCAGGTGGCGTCGAACGTTCGTGAGCTCGCGATGTTCAATCTCGCGA
TTGATAGCAAGCTGCGGGCGTGCGACCTTACGCGGTTACGGGTCCAGGATGTCCGTCACGGAAGCCAAGTGGCGTCGAGA
GCGACAGTCATGCAGCAAAAGACCCAGCGGCCCGTGCAATTTGAGATCACGGAACAGACCCGTGAGAGCCTCGAGGCGTG
GATCGATGCCCGAGGACTGAAGGCGGCGGACTTTCTGTTCCCGAGCCGGATCCATACTTCGCAGCACCTGTCGACGCGGC
AATATGCCCGGCTGGTACAGCGCTGGGTCGCGTCGATTGGCCTCGACGATACCGCATACGGTACCCACACGATGCGCCGC
ACGAAAGCTTCGCTGATCTACCGGCAGACGAAGAACCTTCGAGCCGTGCAGTTGCTGCTCGGCCACACAAAGCTGGAAAG
CACGGTTCGCTACCTGGGAATCGAGGTCGACGATGCCCTTGAGATGGCGGAGCAGACCGAGGTTTGA

Upstream 100 bases:

>100_bases
AATGTCCGTTTTCGAGCGTTTCGAAGGTCGCCTTCGGGTCGGCCTGCGACCGTCCGACGCGGCGCACACTCAATCTCCAT
TCGCTTGAAAGGAGATTGTC

Downstream 100 bases:

>100_bases
TGGCATGGCGGCCGGCGAGCGGTCGCTTGCCGGCCAGTTTTGGCCGTTCGCCTCGGTGCGCACGAGAACACTCAGAGGTC
GGTTGATGTCAGCATTGCCG

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MESENVVVVYRVPWNQGKLIGQKPPLKLREIWAIRTRLQVASNVRELAMFNLAIDSKLRACDLTRLRVQDVRHGSQVASR
ATVMQQKTQRPVQFEITEQTRESLEAWIDARGLKAADFLFPSRIHTSQHLSTRQYARLVQRWVASIGLDDTAYGTHTMRR
TKASLIYRQTKNLRAVQLLLGHTKLESTVRYLGIEVDDALEMAEQTEV

Sequences:

>Translated_208_residues
MESENVVVVYRVPWNQGKLIGQKPPLKLREIWAIRTRLQVASNVRELAMFNLAIDSKLRACDLTRLRVQDVRHGSQVASR
ATVMQQKTQRPVQFEITEQTRESLEAWIDARGLKAADFLFPSRIHTSQHLSTRQYARLVQRWVASIGLDDTAYGTHTMRR
TKASLIYRQTKNLRAVQLLLGHTKLESTVRYLGIEVDDALEMAEQTEV
>Mature_208_residues
MESENVVVVYRVPWNQGKLIGQKPPLKLREIWAIRTRLQVASNVRELAMFNLAIDSKLRACDLTRLRVQDVRHGSQVASR
ATVMQQKTQRPVQFEITEQTRESLEAWIDARGLKAADFLFPSRIHTSQHLSTRQYARLVQRWVASIGLDDTAYGTHTMRR
TKASLIYRQTKNLRAVQLLLGHTKLESTVRYLGIEVDDALEMAEQTEV

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 23940; Mature: 23940

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESENVVVVYRVPWNQGKLIGQKPPLKLREIWAIRTRLQVASNVRELAMFNLAIDSKLRA
CCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
CDLTRLRVQDVRHGSQVASRATVMQQKTQRPVQFEITEQTRESLEAWIDARGLKAADFLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCHHHHHC
PSRIHTSQHLSTRQYARLVQRWVASIGLDDTAYGTHTMRRTKASLIYRQTKNLRAVQLLL
CHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
GHTKLESTVRYLGIEVDDALEMAEQTEV
HHHHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MESENVVVVYRVPWNQGKLIGQKPPLKLREIWAIRTRLQVASNVRELAMFNLAIDSKLRA
CCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
CDLTRLRVQDVRHGSQVASRATVMQQKTQRPVQFEITEQTRESLEAWIDARGLKAADFLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCHHHHHC
PSRIHTSQHLSTRQYARLVQRWVASIGLDDTAYGTHTMRRTKASLIYRQTKNLRAVQLLL
CHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
GHTKLESTVRYLGIEVDDALEMAEQTEV
HHHHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]