| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is 53718206
Identifier: 53718206
GI number: 53718206
Start: 621413
End: 623332
Strand: Reverse
Name: 53718206
Synonym: BPSL0566
Alternate gene names: NA
Gene position: 623332-621413 (Counterclockwise)
Preceding gene: 53718207
Following gene: 53718205
Centisome position: 15.3
GC content: 55.57
Gene sequence:
>1920_bases ATGACTATGCTTGACCCGACGCTGCGCGTAAGCCGACTCGTCGTTTTCCAGGGCGGTCACGTCGCATTCGACTGCTCGTT CCACAGCGGAGTCAATGTCATTCGCGGCCGGAATAGCTCTGGCAAGACAACCATCATGGACCTTCTCGCGTTTTCGCTGG GCGCAGAAAATATCCGATGGAAGCCAGAGGCACTGCGTTGCACCAATACGTTCGTTGAGGTACAGCTTAACGGCGCCGTC GCGTGTCTTCGTCGTGAGATTGATACGGCACTTCAACGCCCAATGTCGATATTTTGGGGCGCACTCGACGCATCACTGAA GGCCGGCCCGCAACAGTGGGAGCTGTATCCCTTCAAGCGAAGCGCGCATCGCATCAGCTTCTCTCAAGCATTGTTCGATG CACTTGACATGCCGCAAGCGCAAGGTGACGGAGCATCGAACCTAACGATGCATCAGCTTTTGCGCGTCCTCTATGCAGAC CAACCATCGGTACACAGCCCCATCTTCCGCCTCGACAACTTTGATAGTCCTCTGACGCGCGACATGGTCGGCGGGTACCT CAGCGGCGTATATGACGACCGGCTTTATTCAGCGCAACTGCGACTTCGCGAACTTGACGGGCAGATTGCGAAGCAGGAGA CGGAGCTCCGAGGCATCTTTCACGTACTTGGACGTTCTGGTCAAACCCCGGACCTTCAGTTTCTGACCGATAAAATTTCC GAACTGGAAGCGGCTCGCAGAGCGCTTTCCGATACGCTGACAAAACTGAAGCAGGACCGAACGCTGCCTCGCAAAGATGC GAACAAGGCGCGCGCCTCCGCCGACACTTTGCGTAGCACTCTGAACGCTGCGCGCCAGGCCGAATTCGCAGCCAAGGACC GTCTGGCGGCGCTCGAACTCGACATCGAAGATTCTCGCCTGTTCGTCGGCGAACTCAAGTCCAGACTGCAGAGCCTGGGC GAATCGAAAGAAACCCGGACTTATTTTAGTAATTTGCAGTTCCAGTTTTGCCCGAGCTGCCTCGCCGAGCTTCCAAAAGC AACGGCGGACTCCCACGTTTGTCATCTTTGTACCGGCTCGCTCGGTGACGGCCGGGCAGACACGCAGCTTCTCCGGATGA AAAACGAACTGAACATCCAACTTAAAGAATCGACGACTCTCATCGAAACTCGTCTGAAGGATGCCGAAAAGCTTCGTGTC GAAGTCCCCCACCTTTCACAACGAGTTAGAAAGCTGGAGCAGGACTATGCTGCGGCAGCTACGTCGTGGTCTAGCGAACT CGAGATTGCCCTTGAGGAACACGCACGCAAGCTCGGTGCAGTAGACGAAGAAATACGTCAAGCGTACGAGCAACAAAAGC TCGCTACCGTCATCACGGACCTGCAAAAACGCCGTGACGCGCTAACCGCCGAAGGCAAGCGGCTGCAAGAGAGCATCATA CGTTTGGAGCAACAGCAAGCCGAGCGGAAGGTCGAAGTCGCGAATACGATTACCGCTGCAATGGTTAGGCTTCTCAAGCT CGACCTGCCCCTGACGCCTGAATTCATCGATGCGCAGGTAGCGAACTTCGACTTCGTGGCAAACGAAGTCTACGTTAACG GCTCCAAAAATTTTTCTGAGAGCTCGGCTGTAGTGTTGCGCCATATCTTCCACCTCTCACTGCTTACGGCAAGCGTGCAG AAGCCGTTCATGCGCGTACCGCGCTTCATGATGCTTGACGGAATCGACGACGGTGGCATGGAAAAGGAACGCAGCCACCG CCTGCAAGAAATCATCGTTGAGGAATGCGCGAGCTACGATGTCGACTATCAGCTCATCTTCGCGACTTCCGACATAAACC CGAAGTTCGAAGAGACTGACTTGGTGGTGGGCAGATTCTTTACACCCCAGGCTCGCTCGCTGGACGTGCGAGAAGCCTAG
Upstream 100 bases:
>100_bases AACTCGCCTATGGCCGAGAGTATCCTTAACGGCCTCTCACAGATTCCACTGCTTGGGAGCAACGGGCTGAAGCATCGTTC CGAACTCATGGAGTACCGGT
Downstream 100 bases:
>100_bases CCTGGCAAATACCATCGCGATTGAAGTCGGCATCTTTAGCGCACAGCAAAACCGAGAGGCATCGTGTCAGTCATCAAGCA GCAGTATAAAAGCCTAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 639; Mature: 638
Protein sequence:
>639_residues MTMLDPTLRVSRLVVFQGGHVAFDCSFHSGVNVIRGRNSSGKTTIMDLLAFSLGAENIRWKPEALRCTNTFVEVQLNGAV ACLRREIDTALQRPMSIFWGALDASLKAGPQQWELYPFKRSAHRISFSQALFDALDMPQAQGDGASNLTMHQLLRVLYAD QPSVHSPIFRLDNFDSPLTRDMVGGYLSGVYDDRLYSAQLRLRELDGQIAKQETELRGIFHVLGRSGQTPDLQFLTDKIS ELEAARRALSDTLTKLKQDRTLPRKDANKARASADTLRSTLNAARQAEFAAKDRLAALELDIEDSRLFVGELKSRLQSLG ESKETRTYFSNLQFQFCPSCLAELPKATADSHVCHLCTGSLGDGRADTQLLRMKNELNIQLKESTTLIETRLKDAEKLRV EVPHLSQRVRKLEQDYAAAATSWSSELEIALEEHARKLGAVDEEIRQAYEQQKLATVITDLQKRRDALTAEGKRLQESII RLEQQQAERKVEVANTITAAMVRLLKLDLPLTPEFIDAQVANFDFVANEVYVNGSKNFSESSAVVLRHIFHLSLLTASVQ KPFMRVPRFMMLDGIDDGGMEKERSHRLQEIIVEECASYDVDYQLIFATSDINPKFEETDLVVGRFFTPQARSLDVREA
Sequences:
>Translated_639_residues MTMLDPTLRVSRLVVFQGGHVAFDCSFHSGVNVIRGRNSSGKTTIMDLLAFSLGAENIRWKPEALRCTNTFVEVQLNGAV ACLRREIDTALQRPMSIFWGALDASLKAGPQQWELYPFKRSAHRISFSQALFDALDMPQAQGDGASNLTMHQLLRVLYAD QPSVHSPIFRLDNFDSPLTRDMVGGYLSGVYDDRLYSAQLRLRELDGQIAKQETELRGIFHVLGRSGQTPDLQFLTDKIS ELEAARRALSDTLTKLKQDRTLPRKDANKARASADTLRSTLNAARQAEFAAKDRLAALELDIEDSRLFVGELKSRLQSLG ESKETRTYFSNLQFQFCPSCLAELPKATADSHVCHLCTGSLGDGRADTQLLRMKNELNIQLKESTTLIETRLKDAEKLRV EVPHLSQRVRKLEQDYAAAATSWSSELEIALEEHARKLGAVDEEIRQAYEQQKLATVITDLQKRRDALTAEGKRLQESII RLEQQQAERKVEVANTITAAMVRLLKLDLPLTPEFIDAQVANFDFVANEVYVNGSKNFSESSAVVLRHIFHLSLLTASVQ KPFMRVPRFMMLDGIDDGGMEKERSHRLQEIIVEECASYDVDYQLIFATSDINPKFEETDLVVGRFFTPQARSLDVREA >Mature_638_residues TMLDPTLRVSRLVVFQGGHVAFDCSFHSGVNVIRGRNSSGKTTIMDLLAFSLGAENIRWKPEALRCTNTFVEVQLNGAVA CLRREIDTALQRPMSIFWGALDASLKAGPQQWELYPFKRSAHRISFSQALFDALDMPQAQGDGASNLTMHQLLRVLYADQ PSVHSPIFRLDNFDSPLTRDMVGGYLSGVYDDRLYSAQLRLRELDGQIAKQETELRGIFHVLGRSGQTPDLQFLTDKISE LEAARRALSDTLTKLKQDRTLPRKDANKARASADTLRSTLNAARQAEFAAKDRLAALELDIEDSRLFVGELKSRLQSLGE SKETRTYFSNLQFQFCPSCLAELPKATADSHVCHLCTGSLGDGRADTQLLRMKNELNIQLKESTTLIETRLKDAEKLRVE VPHLSQRVRKLEQDYAAAATSWSSELEIALEEHARKLGAVDEEIRQAYEQQKLATVITDLQKRRDALTAEGKRLQESIIR LEQQQAERKVEVANTITAAMVRLLKLDLPLTPEFIDAQVANFDFVANEVYVNGSKNFSESSAVVLRHIFHLSLLTASVQK PFMRVPRFMMLDGIDDGGMEKERSHRLQEIIVEECASYDVDYQLIFATSDINPKFEETDLVVGRFFTPQARSLDVREA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71960; Mature: 71829
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMLDPTLRVSRLVVFQGGHVAFDCSFHSGVNVIRGRNSSGKTTIMDLLAFSLGAENIRW CCCCCCHHHHEEEEEEECCEEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCC KPEALRCTNTFVEVQLNGAVACLRREIDTALQRPMSIFWGALDASLKAGPQQWELYPFKR CCHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHH SAHRISFSQALFDALDMPQAQGDGASNLTMHQLLRVLYADQPSVHSPIFRLDNFDSPLTR HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHH DMVGGYLSGVYDDRLYSAQLRLRELDGQIAKQETELRGIFHVLGRSGQTPDLQFLTDKIS HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ELEAARRALSDTLTKLKQDRTLPRKDANKARASADTLRSTLNAARQAEFAAKDRLAALEL HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE DIEDSRLFVGELKSRLQSLGESKETRTYFSNLQFQFCPSCLAELPKATADSHVCHLCTGS CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEECCC LGDGRADTQLLRMKNELNIQLKESTTLIETRLKDAEKLRVEVPHLSQRVRKLEQDYAAAA CCCCCHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHH TSWSSELEIALEEHARKLGAVDEEIRQAYEQQKLATVITDLQKRRDALTAEGKRLQESII HCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLEQQQAERKVEVANTITAAMVRLLKLDLPLTPEFIDAQVANFDFVANEVYVNGSKNFSE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEEEEECCCCCCCH SSAVVLRHIFHLSLLTASVQKPFMRVPRFMMLDGIDDGGMEKERSHRLQEIIVEECASYD HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC VDYQLIFATSDINPKFEETDLVVGRFFTPQARSLDVREA CCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure TMLDPTLRVSRLVVFQGGHVAFDCSFHSGVNVIRGRNSSGKTTIMDLLAFSLGAENIRW CCCCCHHHHEEEEEEECCEEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCC KPEALRCTNTFVEVQLNGAVACLRREIDTALQRPMSIFWGALDASLKAGPQQWELYPFKR CCHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHH SAHRISFSQALFDALDMPQAQGDGASNLTMHQLLRVLYADQPSVHSPIFRLDNFDSPLTR HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHH DMVGGYLSGVYDDRLYSAQLRLRELDGQIAKQETELRGIFHVLGRSGQTPDLQFLTDKIS HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ELEAARRALSDTLTKLKQDRTLPRKDANKARASADTLRSTLNAARQAEFAAKDRLAALEL HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE DIEDSRLFVGELKSRLQSLGESKETRTYFSNLQFQFCPSCLAELPKATADSHVCHLCTGS CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEECCC LGDGRADTQLLRMKNELNIQLKESTTLIETRLKDAEKLRVEVPHLSQRVRKLEQDYAAAA CCCCCHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHH TSWSSELEIALEEHARKLGAVDEEIRQAYEQQKLATVITDLQKRRDALTAEGKRLQESII HCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLEQQQAERKVEVANTITAAMVRLLKLDLPLTPEFIDAQVANFDFVANEVYVNGSKNFSE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEEEEECCCCCCCH SSAVVLRHIFHLSLLTASVQKPFMRVPRFMMLDGIDDGGMEKERSHRLQEIIVEECASYD HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC VDYQLIFATSDINPKFEETDLVVGRFFTPQARSLDVREA CCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA