| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718175
Identifier: 53718175
GI number: 53718175
Start: 588157
End: 588771
Strand: Reverse
Name: 53718175
Synonym: BPSL0536
Alternate gene names: NA
Gene position: 588771-588157 (Counterclockwise)
Preceding gene: 53718176
Following gene: 53718174
Centisome position: 14.45
GC content: 67.97
Gene sequence:
>615_bases ATGGACGGCAAATTCCGGCTGACCTCGATGATCCCGCTCGCCGCGATGGCGGCGCTCGCGGGCGGCACGTACTGGCTGCT GCAGGCGACGCTGCCGCCGCCCGGCGAGGCCGTCGTGCGGCCGAAGTCGCACACGCCCGACTATTTCGCGGACAATTTCT CCGTCACCGAGCTCGACCAGACGGGCTCGACCCAGTACCGGCTCACGGCCGCGGGCCTCGTCCACTACGAAGACGACGAG ACGAGCGACCTCACGCGGCCGGCACTGCGCGCGTTCCAGCCCGGCAAGCCGACCGTGACCGCCACCGCCAAGCGCGGCGC CGTCAACGGCGACGTGTCGATCGTCGATTTGTATGACGATGCGCGGATCCTGCGCGCGGCGGGCGCGGGCGACCCGCCGA TGCAGGCGGATTCCCAGCATTTCCGGGTGCTGGTCAACGACGATGTGATCGAGACCGAAAAGCCGGTTAAACTTCAGCGC GGCCTGTCGATCGCGAACGCCGCCGCCGGGATGAAGTACAACAACGTCACCCGGGTCATCGAACTTTACGGCAACGTGCG CGGCACGATCGCCGCTTCCGACACGTCCGGCGGCGCTGCTGGCCAACCCAAGTAA
Upstream 100 bases:
>100_bases GCGGCGGTCACGGCGCGGTGCGCGAAGTGTGCGATGCGATCCTGCGCGCGCAGCACCGCTACGACGCGCTGCTCGCGGCC GCCTGCGGAGCCTGAACGGG
Downstream 100 bases:
>100_bases CTCACCACGCGGGACTGCATGAACGAATCGTTCCCCTGTTTATTTCCGAGCGGCGCACGCCGCGCCGCGCGCGCGATGGT CGCGGCGGCGCTCGTCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Exported Protein
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MDGKFRLTSMIPLAAMAALAGGTYWLLQATLPPPGEAVVRPKSHTPDYFADNFSVTELDQTGSTQYRLTAAGLVHYEDDE TSDLTRPALRAFQPGKPTVTATAKRGAVNGDVSIVDLYDDARILRAAGAGDPPMQADSQHFRVLVNDDVIETEKPVKLQR GLSIANAAAGMKYNNVTRVIELYGNVRGTIAASDTSGGAAGQPK
Sequences:
>Translated_204_residues MDGKFRLTSMIPLAAMAALAGGTYWLLQATLPPPGEAVVRPKSHTPDYFADNFSVTELDQTGSTQYRLTAAGLVHYEDDE TSDLTRPALRAFQPGKPTVTATAKRGAVNGDVSIVDLYDDARILRAAGAGDPPMQADSQHFRVLVNDDVIETEKPVKLQR GLSIANAAAGMKYNNVTRVIELYGNVRGTIAASDTSGGAAGQPK >Mature_204_residues MDGKFRLTSMIPLAAMAALAGGTYWLLQATLPPPGEAVVRPKSHTPDYFADNFSVTELDQTGSTQYRLTAAGLVHYEDDE TSDLTRPALRAFQPGKPTVTATAKRGAVNGDVSIVDLYDDARILRAAGAGDPPMQADSQHFRVLVNDDVIETEKPVKLQR GLSIANAAAGMKYNNVTRVIELYGNVRGTIAASDTSGGAAGQPK
Specific function: Unknown
COG id: COG3117
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21691; Mature: 21691
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGKFRLTSMIPLAAMAALAGGTYWLLQATLPPPGEAVVRPKSHTPDYFADNFSVTELDQ CCCCEEEHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCEEEEECC TGSTQYRLTAAGLVHYEDDETSDLTRPALRAFQPGKPTVTATAKRGAVNGDVSIVDLYDD CCCCEEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCC ARILRAAGAGDPPMQADSQHFRVLVNDDVIETEKPVKLQRGLSIANAAAGMKYNNVTRVI CEEEEECCCCCCCCCCCCCEEEEEECCCEECCCCCCHHHHCCCHHHHHCCCEECHHHHHH ELYGNVRGTIAASDTSGGAAGQPK HHHCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MDGKFRLTSMIPLAAMAALAGGTYWLLQATLPPPGEAVVRPKSHTPDYFADNFSVTELDQ CCCCEEEHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCEEEEECC TGSTQYRLTAAGLVHYEDDETSDLTRPALRAFQPGKPTVTATAKRGAVNGDVSIVDLYDD CCCCEEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCC ARILRAAGAGDPPMQADSQHFRVLVNDDVIETEKPVKLQRGLSIANAAAGMKYNNVTRVI CEEEEECCCCCCCCCCCCCEEEEEECCCEECCCCCCHHHHCCCHHHHHCCCEECHHHHHH ELYGNVRGTIAASDTSGGAAGQPK HHHCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA