| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718123
Identifier: 53718123
GI number: 53718123
Start: 525722
End: 526762
Strand: Reverse
Name: 53718123
Synonym: BPSL0484
Alternate gene names: NA
Gene position: 526762-525722 (Counterclockwise)
Preceding gene: 53718124
Following gene: 53718122
Centisome position: 12.93
GC content: 75.5
Gene sequence:
>1041_bases ATGCTCACGATCCATCACACCGCGATCCGGCAGCCGTCCCGCCGGTCGGTCGACGCCGCGCAGGCGAGCGGCCGCTATCG CTACGACGGGCGGCTCGCGCCGCATGCGATCCGCTTCGCGATGCCGTACGAACGGCTCGACTACGACACGCACACGTTCG CCCACCTCGCGCGCCCGGCGCCCGCTTCGCTGCCCGTCGAGACACGCGGGCGCACGCTGTCGGACCTCGCGCTCGAAGCC GTGCGCGACGTCGTCGGCGCCGCGGGCCCCGGCGCGTGCGCGTCGATCTCGCAGATCGTCGTCGCGCAGGCGTCGCTCAA CGAGCACGCGGGCGAATCGGTCGCCGGCCGGATGCAGCACGCGCTCGGGCTCAAGCACATCGTGCCGTTCGCGCTCGGCC AGTGCGGCACGCTCGGCCTGCACGCGGCGCTGCCGCTCGCGCACGGGCTGCTGCGCGACGGCGGCCGCATGCTGTTCGTC GCCGCCGACAAATGGGTGTATCCGTTCCTGCGCACCTACGGCGAGTTCGTCGCCTACGGCGACGGCGCCGCGGCGATCCT GCTCGGCCACGCCGAAACCGACGCCGAAGCCGACGCGGCGCAGGCCCGCGTGCTCGGCCATGCGCTCGCGCACGGCGAGC CGATCGCCGACCCTTGGGCGCGGCAGCCGGCCGAGCTCGAACGCGCGCTCGTCGCGCCGACCGTCGACGCGGCGCGCGCG GCGCTCGCCGACGCGGGCGTCGGCGCCGCGCGGATCGACTGCTTCGCGCCGGGCGGCTTCAGCGCGTCGTTTCGCACGAC GCTCGCGCGCGCGCTCGCGATCCCGCCGTCGCGCCTGCAAGTGCGCGACGGCGTCGAGCATCTGTCCACCGCCGACACGC CGCGCGCGCTCGCGCAGGCGCAGGCGTCGCTCGCGCCCGGCGAACGGCGGCTCGCGCTCTTTTGCGACACCGCGCTCGCG GGCGGCGCGGGCGCGCTCGTCGCGCAGTTGCGCGGCGCGCACGCATCGTCTTCGTCCACCCGAACCCGGTATCCGTCATG A
Upstream 100 bases:
>100_bases ACGGCAAGATCGACCGGCCGCTGCTCAAGCGCGCCCACCTGTCGCGTTTCGAGGCCGAGCCGCGCGCGGCCGCGCTCGGC TGAGCGAGGGGACGAAGACC
Downstream 100 bases:
>100_bases GCGCCTATCAAGTGAGCCTGCGCGAACTGCGCTTCTTTCTGTGGGAACTGTGCGACGCCGAAGCGGCGTTCCTGTCGCAC GCGCCGTACCGAGCGCACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MLTIHHTAIRQPSRRSVDAAQASGRYRYDGRLAPHAIRFAMPYERLDYDTHTFAHLARPAPASLPVETRGRTLSDLALEA VRDVVGAAGPGACASISQIVVAQASLNEHAGESVAGRMQHALGLKHIVPFALGQCGTLGLHAALPLAHGLLRDGGRMLFV AADKWVYPFLRTYGEFVAYGDGAAAILLGHAETDAEADAAQARVLGHALAHGEPIADPWARQPAELERALVAPTVDAARA ALADAGVGAARIDCFAPGGFSASFRTTLARALAIPPSRLQVRDGVEHLSTADTPRALAQAQASLAPGERRLALFCDTALA GGAGALVAQLRGAHASSSSTRTRYPS
Sequences:
>Translated_346_residues MLTIHHTAIRQPSRRSVDAAQASGRYRYDGRLAPHAIRFAMPYERLDYDTHTFAHLARPAPASLPVETRGRTLSDLALEA VRDVVGAAGPGACASISQIVVAQASLNEHAGESVAGRMQHALGLKHIVPFALGQCGTLGLHAALPLAHGLLRDGGRMLFV AADKWVYPFLRTYGEFVAYGDGAAAILLGHAETDAEADAAQARVLGHALAHGEPIADPWARQPAELERALVAPTVDAARA ALADAGVGAARIDCFAPGGFSASFRTTLARALAIPPSRLQVRDGVEHLSTADTPRALAQAQASLAPGERRLALFCDTALA GGAGALVAQLRGAHASSSSTRTRYPS >Mature_346_residues MLTIHHTAIRQPSRRSVDAAQASGRYRYDGRLAPHAIRFAMPYERLDYDTHTFAHLARPAPASLPVETRGRTLSDLALEA VRDVVGAAGPGACASISQIVVAQASLNEHAGESVAGRMQHALGLKHIVPFALGQCGTLGLHAALPLAHGLLRDGGRMLFV AADKWVYPFLRTYGEFVAYGDGAAAILLGHAETDAEADAAQARVLGHALAHGEPIADPWARQPAELERALVAPTVDAARA ALADAGVGAARIDCFAPGGFSASFRTTLARALAIPPSRLQVRDGVEHLSTADTPRALAQAQASLAPGERRLALFCDTALA GGAGALVAQLRGAHASSSSTRTRYPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36179; Mature: 36179
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTIHHTAIRQPSRRSVDAAQASGRYRYDGRLAPHAIRFAMPYERLDYDTHTFAHLARPA CEEECHHHHCCCCCCCCHHHHHCCCEEECCCCCCHHHHHHCCHHHHCCCHHHHHHHCCCC PASLPVETRGRTLSDLALEAVRDVVGAAGPGACASISQIVVAQASLNEHAGESVAGRMQH CCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH ALGLKHIVPFALGQCGTLGLHAALPLAHGLLRDGGRMLFVAADKWVYPFLRTYGEFVAYG HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHEEEC DGAAAILLGHAETDAEADAAQARVLGHALAHGEPIADPWARQPAELERALVAPTVDAARA CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHCCCHHHHHH ALADAGVGAARIDCFAPGGFSASFRTTLARALAIPPSRLQVRDGVEHLSTADTPRALAQA HHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH QASLAPGERRLALFCDTALAGGAGALVAQLRGAHASSSSTRTRYPS HHHCCCCCCEEEEEECCHHCCCHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MLTIHHTAIRQPSRRSVDAAQASGRYRYDGRLAPHAIRFAMPYERLDYDTHTFAHLARPA CEEECHHHHCCCCCCCCHHHHHCCCEEECCCCCCHHHHHHCCHHHHCCCHHHHHHHCCCC PASLPVETRGRTLSDLALEAVRDVVGAAGPGACASISQIVVAQASLNEHAGESVAGRMQH CCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH ALGLKHIVPFALGQCGTLGLHAALPLAHGLLRDGGRMLFVAADKWVYPFLRTYGEFVAYG HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHEEEC DGAAAILLGHAETDAEADAAQARVLGHALAHGEPIADPWARQPAELERALVAPTVDAARA CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHCCCHHHHHH ALADAGVGAARIDCFAPGGFSASFRTTLARALAIPPSRLQVRDGVEHLSTADTPRALAQA HHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH QASLAPGERRLALFCDTALAGGAGALVAQLRGAHASSSSTRTRYPS HHHCCCCCCEEEEEECCHHCCCHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA