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The map label for this gene is ynfM [H]

Identifier: 53718113

GI number: 53718113

Start: 514322

End: 515515

Strand: Reverse

Name: ynfM [H]

Synonym: BPSL0474

Alternate gene names: 53718113

Gene position: 515515-514322 (Counterclockwise)

Preceding gene: 53718114

Following gene: 53718112

Centisome position: 12.65

GC content: 69.6

Gene sequence:

>1194_bases
GTGGTAACCAACACGCTACGCTTTGCATTCTTCATGTGCGGCTGCGCGGCTTTTCTCGGCCTGTACGCGACGCAGGGCAT
CCTGCCCCAGATCGCGGCCACGTTCGGCACGCGCATCGAACAGGCCGCACTCGGCATTACGGCCACGACGGTTGCGATGG
CGGCGACGGCGCCGTTCGTCGGCATGCTGACGCGCCGCCTGGAACGGCGCCGGATCATCACGCTCGCCGCGCTGCTGCTC
GCGGCGCCGATGCTCTGGACCGCGCACGCGGATTCGTTCGCCGAATTCCTCGCGGGACGGATCGCGACGGGAGTCGTCAT
TCCGGTGCTGTTCGCCGTCACGGTGTCGTACATCGGCGAAACCTGGCAGGACAGCACAGCCACCGAGATGACGAGCTTCT
TCATCGCCGGCACGACGCTCGGCGGCTTCGGCGGACGCTTCATCGTCAACGGCGTGACGGCGATGAGCGGCTGGCCGCGC
GCGCTCGACGTGCTCGCGTGCGCGATGCTCGCCGCGGGCGTCGCGATCCGGCTGTGCCTGCCGCGCACGCGCGCGGCGGC
GACGGCGGCAGCCCCGGCGGCGATGTCGCTGCGCGCGCTCGGCCGCAACCGGCCGGTGCTCGCGTCGTATTTCATCGGCG
CGTGCATCCTGTTCTCGCAGGTCACGACGTTCACGTACGTCGGGCTGTATCTCGCGAAGCCGCCGTATCGGTTCGGCACC
GCGGCGATCGGCTCGATCTATGCGGTCTTCCTGCTCGCCGTCGTGGTCACGCCGATGGCCGCACGGCTGTCGCGCAGGCG
CCCGCCCGCGGATCTGCTCGCGCTCGCGGCCGGGCTCGGCGTGGCGGGCGCGCTGCTCACGCTTCATGCCGATGTGCGCG
TGATCCTGCTCGGGCTCGCCATCGGCTCGACGGGCGTGTTCGTGGGCCAGGCGGCCGCGAGCGCGTTCGTCACCCGTTCG
ACCGCCGAGGGCCGGACATTCGCAGTGGGGCTTTATCTGTCGTTCTATTATCTGGGCGGCAGCGCGGGAACGGTATTGCC
GGTTCCGGCATGGCAGCGCTTCGGCTGGGCGGGCTGCGTCGCACTCGTCGTGTGCGCGCACCTGCTCGCCGCCATCGCCG
CTTGCACGTTCTGGAAACCGGGCGGCATCGACGCAACACGCACTCGACCATCATCCATCACGACATCGCGCTAG

Upstream 100 bases:

>100_bases
CCGCCATTGCGCATCCGGTATCAATCGGTCGGAATTCGGTATTGGCGGGAATGCGCGCGCTCGCGCGAGACTGTCATTCT
TCAACAATCCGAAACGAACC

Downstream 100 bases:

>100_bases
GCCGGCCAGAGCCGCAGCGGTGGTCCACAGAGAGAAATCGTGCATGAACTCGATCACCACCACGCCCAATCATCTTCTCG
ACATCGTCTACCCCGTGCTT

Product: putative transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MVTNTLRFAFFMCGCAAFLGLYATQGILPQIAATFGTRIEQAALGITATTVAMAATAPFVGMLTRRLERRRIITLAALLL
AAPMLWTAHADSFAEFLAGRIATGVVIPVLFAVTVSYIGETWQDSTATEMTSFFIAGTTLGGFGGRFIVNGVTAMSGWPR
ALDVLACAMLAAGVAIRLCLPRTRAAATAAAPAAMSLRALGRNRPVLASYFIGACILFSQVTTFTYVGLYLAKPPYRFGT
AAIGSIYAVFLLAVVVTPMAARLSRRRPPADLLALAAGLGVAGALLTLHADVRVILLGLAIGSTGVFVGQAAASAFVTRS
TAEGRTFAVGLYLSFYYLGGSAGTVLPVPAWQRFGWAGCVALVVCAHLLAAIAACTFWKPGGIDATRTRPSSITTSR

Sequences:

>Translated_397_residues
MVTNTLRFAFFMCGCAAFLGLYATQGILPQIAATFGTRIEQAALGITATTVAMAATAPFVGMLTRRLERRRIITLAALLL
AAPMLWTAHADSFAEFLAGRIATGVVIPVLFAVTVSYIGETWQDSTATEMTSFFIAGTTLGGFGGRFIVNGVTAMSGWPR
ALDVLACAMLAAGVAIRLCLPRTRAAATAAAPAAMSLRALGRNRPVLASYFIGACILFSQVTTFTYVGLYLAKPPYRFGT
AAIGSIYAVFLLAVVVTPMAARLSRRRPPADLLALAAGLGVAGALLTLHADVRVILLGLAIGSTGVFVGQAAASAFVTRS
TAEGRTFAVGLYLSFYYLGGSAGTVLPVPAWQRFGWAGCVALVVCAHLLAAIAACTFWKPGGIDATRTRPSSITTSR
>Mature_397_residues
MVTNTLRFAFFMCGCAAFLGLYATQGILPQIAATFGTRIEQAALGITATTVAMAATAPFVGMLTRRLERRRIITLAALLL
AAPMLWTAHADSFAEFLAGRIATGVVIPVLFAVTVSYIGETWQDSTATEMTSFFIAGTTLGGFGGRFIVNGVTAMSGWPR
ALDVLACAMLAAGVAIRLCLPRTRAAATAAAPAAMSLRALGRNRPVLASYFIGACILFSQVTTFTYVGLYLAKPPYRFGT
AAIGSIYAVFLLAVVVTPMAARLSRRRPPADLLALAAGLGVAGALLTLHADVRVILLGLAIGSTGVFVGQAAASAFVTRS
TAEGRTFAVGLYLSFYYLGGSAGTVLPVPAWQRFGWAGCVALVVCAHLLAAIAACTFWKPGGIDATRTRPSSITTSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=358, Percent_Identity=26.8156424581006, Blast_Score=119, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41426; Mature: 41426

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTNTLRFAFFMCGCAAFLGLYATQGILPQIAATFGTRIEQAALGITATTVAMAATAPFV
CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
GMLTRRLERRRIITLAALLLAAPMLWTAHADSFAEFLAGRIATGVVIPVLFAVTVSYIGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TWQDSTATEMTSFFIAGTTLGGFGGRFIVNGVTAMSGWPRALDVLACAMLAAGVAIRLCL
CCCCCHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
PRTRAAATAAAPAAMSLRALGRNRPVLASYFIGACILFSQVTTFTYVGLYLAKPPYRFGT
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
AAIGSIYAVFLLAVVVTPMAARLSRRRPPADLLALAAGLGVAGALLTLHADVRVILLGLA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGSTGVFVGQAAASAFVTRSTAEGRTFAVGLYLSFYYLGGSAGTVLPVPAWQRFGWAGCV
HCCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCCCEEECCCHHHCCHHHHH
ALVVCAHLLAAIAACTFWKPGGIDATRTRPSSITTSR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVTNTLRFAFFMCGCAAFLGLYATQGILPQIAATFGTRIEQAALGITATTVAMAATAPFV
CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
GMLTRRLERRRIITLAALLLAAPMLWTAHADSFAEFLAGRIATGVVIPVLFAVTVSYIGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TWQDSTATEMTSFFIAGTTLGGFGGRFIVNGVTAMSGWPRALDVLACAMLAAGVAIRLCL
CCCCCHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
PRTRAAATAAAPAAMSLRALGRNRPVLASYFIGACILFSQVTTFTYVGLYLAKPPYRFGT
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
AAIGSIYAVFLLAVVVTPMAARLSRRRPPADLLALAAGLGVAGALLTLHADVRVILLGLA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGSTGVFVGQAAASAFVTRSTAEGRTFAVGLYLSFYYLGGSAGTVLPVPAWQRFGWAGCV
HCCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCCCEEECCCHHHCCHHHHH
ALVVCAHLLAAIAACTFWKPGGIDATRTRPSSITTSR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]