| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718112
Identifier: 53718112
GI number: 53718112
Start: 513457
End: 514278
Strand: Reverse
Name: 53718112
Synonym: BPSL0473
Alternate gene names: NA
Gene position: 514278-513457 (Counterclockwise)
Preceding gene: 53718113
Following gene: 53718104
Centisome position: 12.62
GC content: 67.4
Gene sequence:
>822_bases ATGAACTCGATCACCACCACGCCCAATCATCTTCTCGACATCGTCTACCCCGTGCTTGAAGGGATGGCGCCCGGCGCGCT GCAGCGCGCACTCGCCGACGCGTTCGACGCGGAATCGGCGTCGCTCGCGCAAATCGAGCACGCGTTCAACACGCTCACGT CCGGCAAGCCGCCGCAGGAAGCGTTGCGCATGTTCTTCGCGAGCTGGTCGAAGACCAACAATTCGGCGGCGAGCGTGTCG GGCCTCGCGAACCGCGTGACGCTGCTCGCACGCTCCGATCCGGGCTCGCCCGCCTCGGCGAGGCTCTACGACGTATGCGC GAGCCTGCAGCGCATCACCGACGAGGATCTCGGCGCGCTCGGCGGCGCGCTGCACGCCGACCTGTTCTACAACATGGCGA CGACGATCTGCGGCGACGACGCGTGGCTGCTGAAATCGAACTGCGTCGCCTCCGCGCAGGCGTTCAAGGATTGGACCGAC CGGCAGCGGCTGCGCAACCGCGACCTGATGCAGGGCCTGCTCACGACGCTCGTGCACGAGGTGTACACGCACGGCGAAGT CGAGTTCATCCATCCGTTGTACAAGGCGTGGGTCGAGCACCGGATGAACGTGCCGGCCGAGCGCGTGCGCTTCGTCGTCG CCTGGGTGACGGTCCACACGGGCGGCACGGAGAGCGCGCACTTCGCGCATGCGGTGCGCGCGATCGACACGTTCTGCGAC GCGATGGACGTGCGGATCGATCCGGCCTCGTCGACGGCGCTGTTCCGCGAATACCTGCGCCGCAAGGCCGACGTGATGCG AACATGCGCGGCCGCGCTCTGA
Upstream 100 bases:
>100_bases CCGGGCGGCATCGACGCAACACGCACTCGACCATCATCCATCACGACATCGCGCTAGGCCGGCCAGAGCCGCAGCGGTGG TCCACAGAGAGAAATCGTGC
Downstream 100 bases:
>100_bases GCGCATCGGCGATCGCGCACGCCGCGCGGGGAAGATCGGGCACGCCGCCTTTCGGGGCGAGAGCGGGAGCGGTGTTCGAA TTCGGCGGTAGTTTGGTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MNSITTTPNHLLDIVYPVLEGMAPGALQRALADAFDAESASLAQIEHAFNTLTSGKPPQEALRMFFASWSKTNNSAASVS GLANRVTLLARSDPGSPASARLYDVCASLQRITDEDLGALGGALHADLFYNMATTICGDDAWLLKSNCVASAQAFKDWTD RQRLRNRDLMQGLLTTLVHEVYTHGEVEFIHPLYKAWVEHRMNVPAERVRFVVAWVTVHTGGTESAHFAHAVRAIDTFCD AMDVRIDPASSTALFREYLRRKADVMRTCAAAL
Sequences:
>Translated_273_residues MNSITTTPNHLLDIVYPVLEGMAPGALQRALADAFDAESASLAQIEHAFNTLTSGKPPQEALRMFFASWSKTNNSAASVS GLANRVTLLARSDPGSPASARLYDVCASLQRITDEDLGALGGALHADLFYNMATTICGDDAWLLKSNCVASAQAFKDWTD RQRLRNRDLMQGLLTTLVHEVYTHGEVEFIHPLYKAWVEHRMNVPAERVRFVVAWVTVHTGGTESAHFAHAVRAIDTFCD AMDVRIDPASSTALFREYLRRKADVMRTCAAAL >Mature_273_residues MNSITTTPNHLLDIVYPVLEGMAPGALQRALADAFDAESASLAQIEHAFNTLTSGKPPQEALRMFFASWSKTNNSAASVS GLANRVTLLARSDPGSPASARLYDVCASLQRITDEDLGALGGALHADLFYNMATTICGDDAWLLKSNCVASAQAFKDWTD RQRLRNRDLMQGLLTTLVHEVYTHGEVEFIHPLYKAWVEHRMNVPAERVRFVVAWVTVHTGGTESAHFAHAVRAIDTFCD AMDVRIDPASSTALFREYLRRKADVMRTCAAAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29982; Mature: 29982
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSITTTPNHLLDIVYPVLEGMAPGALQRALADAFDAESASLAQIEHAFNTLTSGKPPQE CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHH ALRMFFASWSKTNNSAASVSGLANRVTLLARSDPGSPASARLYDVCASLQRITDEDLGAL HHHHHHHHHCCCCCCHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHHH GGALHADLFYNMATTICGDDAWLLKSNCVASAQAFKDWTDRQRLRNRDLMQGLLTTLVHE HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYTHGEVEFIHPLYKAWVEHRMNVPAERVRFVVAWVTVHTGGTESAHFAHAVRAIDTFCD HHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHH AMDVRIDPASSTALFREYLRRKADVMRTCAAAL HHCCEECCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNSITTTPNHLLDIVYPVLEGMAPGALQRALADAFDAESASLAQIEHAFNTLTSGKPPQE CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHH ALRMFFASWSKTNNSAASVSGLANRVTLLARSDPGSPASARLYDVCASLQRITDEDLGAL HHHHHHHHHCCCCCCHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHHH GGALHADLFYNMATTICGDDAWLLKSNCVASAQAFKDWTDRQRLRNRDLMQGLLTTLVHE HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYTHGEVEFIHPLYKAWVEHRMNVPAERVRFVVAWVTVHTGGTESAHFAHAVRAIDTFCD HHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHH AMDVRIDPASSTALFREYLRRKADVMRTCAAAL HHCCEECCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA