Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is 53718112

Identifier: 53718112

GI number: 53718112

Start: 513457

End: 514278

Strand: Reverse

Name: 53718112

Synonym: BPSL0473

Alternate gene names: NA

Gene position: 514278-513457 (Counterclockwise)

Preceding gene: 53718113

Following gene: 53718104

Centisome position: 12.62

GC content: 67.4

Gene sequence:

>822_bases
ATGAACTCGATCACCACCACGCCCAATCATCTTCTCGACATCGTCTACCCCGTGCTTGAAGGGATGGCGCCCGGCGCGCT
GCAGCGCGCACTCGCCGACGCGTTCGACGCGGAATCGGCGTCGCTCGCGCAAATCGAGCACGCGTTCAACACGCTCACGT
CCGGCAAGCCGCCGCAGGAAGCGTTGCGCATGTTCTTCGCGAGCTGGTCGAAGACCAACAATTCGGCGGCGAGCGTGTCG
GGCCTCGCGAACCGCGTGACGCTGCTCGCACGCTCCGATCCGGGCTCGCCCGCCTCGGCGAGGCTCTACGACGTATGCGC
GAGCCTGCAGCGCATCACCGACGAGGATCTCGGCGCGCTCGGCGGCGCGCTGCACGCCGACCTGTTCTACAACATGGCGA
CGACGATCTGCGGCGACGACGCGTGGCTGCTGAAATCGAACTGCGTCGCCTCCGCGCAGGCGTTCAAGGATTGGACCGAC
CGGCAGCGGCTGCGCAACCGCGACCTGATGCAGGGCCTGCTCACGACGCTCGTGCACGAGGTGTACACGCACGGCGAAGT
CGAGTTCATCCATCCGTTGTACAAGGCGTGGGTCGAGCACCGGATGAACGTGCCGGCCGAGCGCGTGCGCTTCGTCGTCG
CCTGGGTGACGGTCCACACGGGCGGCACGGAGAGCGCGCACTTCGCGCATGCGGTGCGCGCGATCGACACGTTCTGCGAC
GCGATGGACGTGCGGATCGATCCGGCCTCGTCGACGGCGCTGTTCCGCGAATACCTGCGCCGCAAGGCCGACGTGATGCG
AACATGCGCGGCCGCGCTCTGA

Upstream 100 bases:

>100_bases
CCGGGCGGCATCGACGCAACACGCACTCGACCATCATCCATCACGACATCGCGCTAGGCCGGCCAGAGCCGCAGCGGTGG
TCCACAGAGAGAAATCGTGC

Downstream 100 bases:

>100_bases
GCGCATCGGCGATCGCGCACGCCGCGCGGGGAAGATCGGGCACGCCGCCTTTCGGGGCGAGAGCGGGAGCGGTGTTCGAA
TTCGGCGGTAGTTTGGTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MNSITTTPNHLLDIVYPVLEGMAPGALQRALADAFDAESASLAQIEHAFNTLTSGKPPQEALRMFFASWSKTNNSAASVS
GLANRVTLLARSDPGSPASARLYDVCASLQRITDEDLGALGGALHADLFYNMATTICGDDAWLLKSNCVASAQAFKDWTD
RQRLRNRDLMQGLLTTLVHEVYTHGEVEFIHPLYKAWVEHRMNVPAERVRFVVAWVTVHTGGTESAHFAHAVRAIDTFCD
AMDVRIDPASSTALFREYLRRKADVMRTCAAAL

Sequences:

>Translated_273_residues
MNSITTTPNHLLDIVYPVLEGMAPGALQRALADAFDAESASLAQIEHAFNTLTSGKPPQEALRMFFASWSKTNNSAASVS
GLANRVTLLARSDPGSPASARLYDVCASLQRITDEDLGALGGALHADLFYNMATTICGDDAWLLKSNCVASAQAFKDWTD
RQRLRNRDLMQGLLTTLVHEVYTHGEVEFIHPLYKAWVEHRMNVPAERVRFVVAWVTVHTGGTESAHFAHAVRAIDTFCD
AMDVRIDPASSTALFREYLRRKADVMRTCAAAL
>Mature_273_residues
MNSITTTPNHLLDIVYPVLEGMAPGALQRALADAFDAESASLAQIEHAFNTLTSGKPPQEALRMFFASWSKTNNSAASVS
GLANRVTLLARSDPGSPASARLYDVCASLQRITDEDLGALGGALHADLFYNMATTICGDDAWLLKSNCVASAQAFKDWTD
RQRLRNRDLMQGLLTTLVHEVYTHGEVEFIHPLYKAWVEHRMNVPAERVRFVVAWVTVHTGGTESAHFAHAVRAIDTFCD
AMDVRIDPASSTALFREYLRRKADVMRTCAAAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29982; Mature: 29982

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSITTTPNHLLDIVYPVLEGMAPGALQRALADAFDAESASLAQIEHAFNTLTSGKPPQE
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHH
ALRMFFASWSKTNNSAASVSGLANRVTLLARSDPGSPASARLYDVCASLQRITDEDLGAL
HHHHHHHHHCCCCCCHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHHH
GGALHADLFYNMATTICGDDAWLLKSNCVASAQAFKDWTDRQRLRNRDLMQGLLTTLVHE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYTHGEVEFIHPLYKAWVEHRMNVPAERVRFVVAWVTVHTGGTESAHFAHAVRAIDTFCD
HHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHH
AMDVRIDPASSTALFREYLRRKADVMRTCAAAL
HHCCEECCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSITTTPNHLLDIVYPVLEGMAPGALQRALADAFDAESASLAQIEHAFNTLTSGKPPQE
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHH
ALRMFFASWSKTNNSAASVSGLANRVTLLARSDPGSPASARLYDVCASLQRITDEDLGAL
HHHHHHHHHCCCCCCHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHHH
GGALHADLFYNMATTICGDDAWLLKSNCVASAQAFKDWTDRQRLRNRDLMQGLLTTLVHE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYTHGEVEFIHPLYKAWVEHRMNVPAERVRFVVAWVTVHTGGTESAHFAHAVRAIDTFCD
HHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHH
AMDVRIDPASSTALFREYLRRKADVMRTCAAAL
HHCCEECCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA