| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is gpmA [H]
Identifier: 53718082
GI number: 53718082
Start: 483930
End: 484679
Strand: Reverse
Name: gpmA [H]
Synonym: BPSL0443
Alternate gene names: 53718082
Gene position: 484679-483930 (Counterclockwise)
Preceding gene: 53718088
Following gene: 53718081
Centisome position: 11.9
GC content: 67.07
Gene sequence:
>750_bases ATGTACAAGCTCGTTCTCATCCGCCACGGCGAATCGACGTGGAACAAGGAAAACCGCTTCACCGGCTGGGTCGATGTCGA CCTGACCGAACAAGGCAACCGCGAAGCCCGGCAGGCGGGCCAGCTCCTGAAGGAAGCCGGCTACACGTTCGATATCGCAT ACACGTCGGTGCTCAAGCGCGCGATCCGCACGCTCTGGCACGTGCAGGACCAGATGGATCTGATGTACGTGCCCGTCGTG CATTCGTGGCGCCTGAACGAGCGCCATTACGGCGCGCTGTCGGGCCTGAACAAGGCGGAGACGGCCGCGAAGTACGGCGA CGAGCAGGTGCTCGTCTGGCGCCGCAGCTACGACACGCCGCCGCCCGCGCTCGAGCCGGGCGACGAGCGCGCGCCGTACG CCGATCCGCGCTACGCGAAGGTGCCGCGTGAGCAGTTGCCGCTCACCGAGTGCCTGAAGGACACGGTCGCGCGCGTGCTG CCGCTCTGGAACGAATCGATCGCGCCCGCGGTGAAGGCCGGCAAGCAGGTGCTGATCGCCGCGCACGGCAACTCGCTGCG CGCGCTGATCAAGTATCTCGACGGCATCTCCGACGCGGACATCGTCGGCCTGAACATCCCGAACGGCGTGCCGCTCGTCT ACGAGCTCGACGAGAGCCTCACGCCCATCCGGCACTACTACCTCGGCGATCAGGAGGCGATCGCGAAGGCGCAGGCCGCC GTCGCGCAGCAGGGCAAGTCCGCGGCGTAA
Upstream 100 bases:
>100_bases GCAATCCCGCCATTATAAAATAACCGTCTGACGCGATGTCGCCCCGGAGCCGGGTCCGCATCCGTGCTTACCGCTTCCTC ACTACCGACCGCAAGCATCT
Downstream 100 bases:
>100_bases GCCGCCGTTTCGCCGCGCGGGCGACGGCAGGTTCCGCGCCGTCCCCGTCGCCGGCGCGCGCCGCGCGAACCTGTTTCGCG CGGCGCTGTCACAATCACGC
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MYKLVLIRHGESTWNKENRFTGWVDVDLTEQGNREARQAGQLLKEAGYTFDIAYTSVLKRAIRTLWHVQDQMDLMYVPVV HSWRLNERHYGALSGLNKAETAAKYGDEQVLVWRRSYDTPPPALEPGDERAPYADPRYAKVPREQLPLTECLKDTVARVL PLWNESIAPAVKAGKQVLIAAHGNSLRALIKYLDGISDADIVGLNIPNGVPLVYELDESLTPIRHYYLGDQEAIAKAQAA VAQQGKSAA
Sequences:
>Translated_249_residues MYKLVLIRHGESTWNKENRFTGWVDVDLTEQGNREARQAGQLLKEAGYTFDIAYTSVLKRAIRTLWHVQDQMDLMYVPVV HSWRLNERHYGALSGLNKAETAAKYGDEQVLVWRRSYDTPPPALEPGDERAPYADPRYAKVPREQLPLTECLKDTVARVL PLWNESIAPAVKAGKQVLIAAHGNSLRALIKYLDGISDADIVGLNIPNGVPLVYELDESLTPIRHYYLGDQEAIAKAQAA VAQQGKSAA >Mature_249_residues MYKLVLIRHGESTWNKENRFTGWVDVDLTEQGNREARQAGQLLKEAGYTFDIAYTSVLKRAIRTLWHVQDQMDLMYVPVV HSWRLNERHYGALSGLNKAETAAKYGDEQVLVWRRSYDTPPPALEPGDERAPYADPRYAKVPREQLPLTECLKDTVARVL PLWNESIAPAVKAGKQVLIAAHGNSLRALIKYLDGISDADIVGLNIPNGVPLVYELDESLTPIRHYYLGDQEAIAKAQAA VAQQGKSAA
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Homo sapiens, GI50593010, Length=252, Percent_Identity=57.9365079365079, Blast_Score=312, Evalue=1e-85, Organism=Homo sapiens, GI4505753, Length=249, Percent_Identity=60.6425702811245, Blast_Score=303, Evalue=1e-82, Organism=Homo sapiens, GI71274132, Length=249, Percent_Identity=59.0361445783133, Blast_Score=289, Evalue=2e-78, Organism=Homo sapiens, GI4502445, Length=250, Percent_Identity=52.4, Blast_Score=267, Evalue=6e-72, Organism=Homo sapiens, GI40353764, Length=250, Percent_Identity=52.4, Blast_Score=267, Evalue=6e-72, Organism=Homo sapiens, GI310129614, Length=162, Percent_Identity=62.962962962963, Blast_Score=199, Evalue=2e-51, Organism=Escherichia coli, GI1786970, Length=245, Percent_Identity=64.8979591836735, Blast_Score=329, Evalue=1e-91, Organism=Saccharomyces cerevisiae, GI6322697, Length=246, Percent_Identity=52.8455284552846, Blast_Score=246, Evalue=3e-66, Organism=Saccharomyces cerevisiae, GI6324516, Length=286, Percent_Identity=33.2167832167832, Blast_Score=155, Evalue=7e-39, Organism=Saccharomyces cerevisiae, GI6320183, Length=291, Percent_Identity=31.9587628865979, Blast_Score=144, Evalue=1e-35, Organism=Drosophila melanogaster, GI24646216, Length=250, Percent_Identity=53.2, Blast_Score=276, Evalue=8e-75, Organism=Drosophila melanogaster, GI85725270, Length=250, Percent_Identity=53.6, Blast_Score=262, Evalue=2e-70, Organism=Drosophila melanogaster, GI85725272, Length=250, Percent_Identity=53.6, Blast_Score=262, Evalue=2e-70, Organism=Drosophila melanogaster, GI24650981, Length=250, Percent_Identity=53.6, Blast_Score=262, Evalue=2e-70, Organism=Drosophila melanogaster, GI28571815, Length=251, Percent_Identity=42.6294820717131, Blast_Score=187, Evalue=5e-48, Organism=Drosophila melanogaster, GI28571817, Length=251, Percent_Identity=42.6294820717131, Blast_Score=187, Evalue=7e-48, Organism=Drosophila melanogaster, GI24648979, Length=251, Percent_Identity=42.6294820717131, Blast_Score=186, Evalue=9e-48,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 27893; Mature: 27893
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKLVLIRHGESTWNKENRFTGWVDVDLTEQGNREARQAGQLLKEAGYTFDIAYTSVLKR CEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHH AIRTLWHVQDQMDLMYVPVVHSWRLNERHYGALSGLNKAETAAKYGDEQVLVWRRSYDTP HHHHHHHHHHCCCEEEECEEEEEECCCCHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCC PPALEPGDERAPYADPRYAKVPREQLPLTECLKDTVARVLPLWNESIAPAVKAGKQVLIA CCCCCCCCCCCCCCCCCHHCCCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEE AHGNSLRALIKYLDGISDADIVGLNIPNGVPLVYELDESLTPIRHYYLGDQEAIAKAQAA ECCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHCCCHHHHHHHHHH VAQQGKSAA HHHCCCCCC >Mature Secondary Structure MYKLVLIRHGESTWNKENRFTGWVDVDLTEQGNREARQAGQLLKEAGYTFDIAYTSVLKR CEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHH AIRTLWHVQDQMDLMYVPVVHSWRLNERHYGALSGLNKAETAAKYGDEQVLVWRRSYDTP HHHHHHHHHHCCCEEEECEEEEEECCCCHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCC PPALEPGDERAPYADPRYAKVPREQLPLTECLKDTVARVLPLWNESIAPAVKAGKQVLIA CCCCCCCCCCCCCCCCCHHCCCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEE AHGNSLRALIKYLDGISDADIVGLNIPNGVPLVYELDESLTPIRHYYLGDQEAIAKAQAA ECCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHCCCHHHHHHHHHH VAQQGKSAA HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA