Click here to switch to the map view.

The map label for this gene is ctpA [H]

Identifier: 53718081

GI number: 53718081

Start: 482135

End: 483709

Strand: Reverse

Name: ctpA [H]

Synonym: BPSL0442

Alternate gene names: 53718081

Gene position: 483709-482135 (Counterclockwise)

Preceding gene: 53718082

Following gene: 53718080

Centisome position: 11.87

GC content: 66.16

Gene sequence:

>1575_bases
ATGCGTATGAAATTGAAGAACATCGGCCTGATTGCCGCGGGCCTCGCGACTGGCGTCTTCGCGACGCTGCAAATCTCCGC
GTCGGCCCAGCAGGCCGTCACGACGGCCGCCGCGCCGCTGCCGCTCGACCAGTTGCGGCTCTTCGCCGAAGTGTTCGGGC
AGATCAAGCGCGAATACGTCGAGCCCGTCGACGACAAGAAGCTGCTGACCGCGGCGATCAAGGGCATGGTGTCGAGCCTC
GATCCGCACTCGTCGTACCTCGACAAGACCGATTACCAGGAACTGCAGGAGCAGACGAAGGGCCGCTTCGCCGGCCTCGG
CATCGAGATTTCGCAGGAAGACGGCCTCGTCAAGGTGATCTCGCCGATCGAGGACACGCCCGCGTTCCGCGCCGGCATCC
GTCCGGGCGACCTGATCACCCGCATCAACGATCGCCCGGTGCGCGGCATGACGCTCGACAAGGCGGTCAAGCAGATGCGC
GGCGAGCCCGGCACGAAGGTCACGCTGACGATCTTCCGCAAGAGCGACGACCGCACGTTCCCCGTCACGGTCACGCGCGC
GGTGATCCGCGTGCAGAGCGTGAAGATGAAGCTGCTCGATCCGGGCTACGCGTACATCCGCATCACGAGCTTCCAGGAGC
GCACGACGCCCGATCTCGCCGCGAAGCTGCAGGACATCGCGCGCCAGCAGCCGAACCTGAAGGGCCTGATCCTCGATCTG
CGCAACAACGGCGGCGGCCTGCTGCAAAGCGCCGTCGGCGTCGCGGGCGCGTTCCTGCCGCCGGATTCCGTCGTCGTGTC
GACGAACGGCCAGATCCCCGATTCGAAGCAGATCTACCGCGACAACTACGAGAACTACCGCCTGCCGTCGTTCGACTCCG
ATCCGCTGAAGAACCTGCCCGCCGTCTTCAAGACGGTGCCGATGATCGTGCTGACGAACGCGTATTCGGCGTCGGCCTCG
GAGATCGTCGCGGGCGCGCTGCAGGATTCGCACCGCGCGGTGATCATGGGCAAGGCGACGTTCGGCAAGGGCTCGGTGCA
GACGGTGCGGCCGATGACAGCCGATTCCGCGCTGCGCCTGACGACCGCGTACTACTACACGCCGAGCGGCCGCTCGATCC
AGAACAAGGGCATCCTGCCCGACATTCCGGTCGATCAGTACGCGGACGGCGATCCGGACGACGTGCTCGTCACGCGCGAG
GTCGATTACACGAACCACCTCGCGAACACGCAGGATCCGAACGAGAAGAAGGAGCTCGAGGAACGCGAGCAGCGCCGGAT
GGAGCAGTTGCGCATCCTCGAGGAGCAGAACGACAAGAAGACGCCCGAGCAGCGTCAGAAGGATCGCGAGCGCAAGCCGA
TCGAATTCGGCAGCGCCGACGATTTCATGATGCAGCAGGCGCTCAACAAGCTCGAAGGCAAGCCGGTCGAGCAGTCGAAG
ATGATCGCCGCCGACAGCACCGCGAAGAGCGCCGCCGCCAAGGCGGGCGTCGCCTCGGCGGCGAAGGGCGCGTCGGGCGC
GGCGGCCAAGCCCGCGTCGGCAGCCAAGCCGGCGTCGGCGCCGCAACCGCAGTAA

Upstream 100 bases:

>100_bases
CGATCCACAAGGCGTCCGGACGAACAGTTATACTTGACCGTCCTGTCACCGTCCCGTTGCTCCCGCGACAGCCACGCGCT
TTCCGACCGCACCAGACTCT

Downstream 100 bases:

>100_bases
GCGCGCGACGCCGTGCACGGGCCATCGCGGCGAGCCGCCGCGATGGCCCGTTTTCTTTGCGCGCCTAAAATAACAATCGA
GACAGTTTCCCCCGCCGCCG

Product: C-terminal processing protease-3

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MRMKLKNIGLIAAGLATGVFATLQISASAQQAVTTAAAPLPLDQLRLFAEVFGQIKREYVEPVDDKKLLTAAIKGMVSSL
DPHSSYLDKTDYQELQEQTKGRFAGLGIEISQEDGLVKVISPIEDTPAFRAGIRPGDLITRINDRPVRGMTLDKAVKQMR
GEPGTKVTLTIFRKSDDRTFPVTVTRAVIRVQSVKMKLLDPGYAYIRITSFQERTTPDLAAKLQDIARQQPNLKGLILDL
RNNGGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQIYRDNYENYRLPSFDSDPLKNLPAVFKTVPMIVLTNAYSASAS
EIVAGALQDSHRAVIMGKATFGKGSVQTVRPMTADSALRLTTAYYYTPSGRSIQNKGILPDIPVDQYADGDPDDVLVTRE
VDYTNHLANTQDPNEKKELEEREQRRMEQLRILEEQNDKKTPEQRQKDRERKPIEFGSADDFMMQQALNKLEGKPVEQSK
MIAADSTAKSAAAKAGVASAAKGASGAAAKPASAAKPASAPQPQ

Sequences:

>Translated_524_residues
MRMKLKNIGLIAAGLATGVFATLQISASAQQAVTTAAAPLPLDQLRLFAEVFGQIKREYVEPVDDKKLLTAAIKGMVSSL
DPHSSYLDKTDYQELQEQTKGRFAGLGIEISQEDGLVKVISPIEDTPAFRAGIRPGDLITRINDRPVRGMTLDKAVKQMR
GEPGTKVTLTIFRKSDDRTFPVTVTRAVIRVQSVKMKLLDPGYAYIRITSFQERTTPDLAAKLQDIARQQPNLKGLILDL
RNNGGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQIYRDNYENYRLPSFDSDPLKNLPAVFKTVPMIVLTNAYSASAS
EIVAGALQDSHRAVIMGKATFGKGSVQTVRPMTADSALRLTTAYYYTPSGRSIQNKGILPDIPVDQYADGDPDDVLVTRE
VDYTNHLANTQDPNEKKELEEREQRRMEQLRILEEQNDKKTPEQRQKDRERKPIEFGSADDFMMQQALNKLEGKPVEQSK
MIAADSTAKSAAAKAGVASAAKGASGAAAKPASAAKPASAPQPQ
>Mature_524_residues
MRMKLKNIGLIAAGLATGVFATLQISASAQQAVTTAAAPLPLDQLRLFAEVFGQIKREYVEPVDDKKLLTAAIKGMVSSL
DPHSSYLDKTDYQELQEQTKGRFAGLGIEISQEDGLVKVISPIEDTPAFRAGIRPGDLITRINDRPVRGMTLDKAVKQMR
GEPGTKVTLTIFRKSDDRTFPVTVTRAVIRVQSVKMKLLDPGYAYIRITSFQERTTPDLAAKLQDIARQQPNLKGLILDL
RNNGGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQIYRDNYENYRLPSFDSDPLKNLPAVFKTVPMIVLTNAYSASAS
EIVAGALQDSHRAVIMGKATFGKGSVQTVRPMTADSALRLTTAYYYTPSGRSIQNKGILPDIPVDQYADGDPDDVLVTRE
VDYTNHLANTQDPNEKKELEEREQRRMEQLRILEEQNDKKTPEQRQKDRERKPIEFGSADDFMMQQALNKLEGKPVEQSK
MIAADSTAKSAAAKAGVASAAKGASGAAAKPASAAKPASAPQPQ

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=339, Percent_Identity=32.4483775811209, Blast_Score=134, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 57070; Mature: 57070

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMKLKNIGLIAAGLATGVFATLQISASAQQAVTTAAAPLPLDQLRLFAEVFGQIKREYV
CCEEECCCCCHHHHHHHHHEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
EPVDDKKLLTAAIKGMVSSLDPHSSYLDKTDYQELQEQTKGRFAGLGIEISQEDGLVKVI
CCCCCHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHCCCEEECCEEECCCCCEEEEE
SPIEDTPAFRAGIRPGDLITRINDRPVRGMTLDKAVKQMRGEPGTKVTLTIFRKSDDRTF
CCCCCCCHHHCCCCCCHHHEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCC
PVTVTRAVIRVQSVKMKLLDPGYAYIRITSFQERTTPDLAAKLQDIARQQPNLKGLILDL
CHHHHHHHHHHHHHHHEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEE
RNNGGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQIYRDNYENYRLPSFDSDPLKNLP
ECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHH
AVFKTVPMIVLTNAYSASASEIVAGALQDSHRAVIMGKATFGKGSVQTVRPMTADSALRL
HHHHHCCCCEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCEECCCCCCCCEEE
TTAYYYTPSGRSIQNKGILPDIPVDQYADGDPDDVLVTREVDYTNHLANTQDPNEKKELE
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCCCCCCCHHHHHH
EREQRRMEQLRILEEQNDKKTPEQRQKDRERKPIEFGSADDFMMQQALNKLEGKPVEQSK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHH
MIAADSTAKSAAAKAGVASAAKGASGAAAKPASAAKPASAPQPQ
EEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRMKLKNIGLIAAGLATGVFATLQISASAQQAVTTAAAPLPLDQLRLFAEVFGQIKREYV
CCEEECCCCCHHHHHHHHHEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
EPVDDKKLLTAAIKGMVSSLDPHSSYLDKTDYQELQEQTKGRFAGLGIEISQEDGLVKVI
CCCCCHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHCCCEEECCEEECCCCCEEEEE
SPIEDTPAFRAGIRPGDLITRINDRPVRGMTLDKAVKQMRGEPGTKVTLTIFRKSDDRTF
CCCCCCCHHHCCCCCCHHHEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCC
PVTVTRAVIRVQSVKMKLLDPGYAYIRITSFQERTTPDLAAKLQDIARQQPNLKGLILDL
CHHHHHHHHHHHHHHHEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEE
RNNGGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQIYRDNYENYRLPSFDSDPLKNLP
ECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHH
AVFKTVPMIVLTNAYSASASEIVAGALQDSHRAVIMGKATFGKGSVQTVRPMTADSALRL
HHHHHCCCCEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCEECCCCCCCCEEE
TTAYYYTPSGRSIQNKGILPDIPVDQYADGDPDDVLVTREVDYTNHLANTQDPNEKKELE
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCCCCCCCHHHHHH
EREQRRMEQLRILEEQNDKKTPEQRQKDRERKPIEFGSADDFMMQQALNKLEGKPVEQSK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHH
MIAADSTAKSAAAKAGVASAAKGASGAAAKPASAAKPASAPQPQ
EEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]