| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718028
Identifier: 53718028
GI number: 53718028
Start: 421177
End: 422445
Strand: Reverse
Name: 53718028
Synonym: BPSL0388
Alternate gene names: NA
Gene position: 422445-421177 (Counterclockwise)
Preceding gene: 53718029
Following gene: 53718027
Centisome position: 10.37
GC content: 72.03
Gene sequence:
>1269_bases GTGCGCCGCGCCGCGTGCGTTCTCGCGCTCGTGCTGGCGCTGCACTGGCTCGCCGCGCTGTGGCTCGTGCGGTTTCGCGA GCCGTTCAGGCCCGTCGAGCCCGACCACGTGCCGGTTCAGGTCGAATTGCTCAAGCCGCAGCCGATCGAGCGCGCGCCCG CGCCGGAGAAGCCCGCCGCCGATCGGCCGCGGGCCGCGCCGAAGCGGGCGGCCCGCGCGCCCGCGCCGCCCGCGCATGCG CCGCGCGCCTCGGCGCCCGTATCGAGCGCCGCTGAATCCTCCACCGAATCCTCCGCTGAATCGCCCGCCGCCGCCTCCGG CACCGAACCGGCAAGCGCGGCGGGCGGGCAGGCGGCCGGCGCGACGAGCGGCGCGGCCGCCGGCGCATCGGGCGCGAGCG CGCCGCCCGGCGAAGCAGCGCAGGGCGTGAAATTCGCGCTGCCGCCGTCCGCCGATCTGCAATACGACACGTTCTACAAC GGCATGCAAAACATGCCCGGCACGATCCACTGGCGCACCGACGGCGGCGGCTATTCGTTATACGTATCGATGCCCGTGCC GTTCGTCGGCCCGTACACATACGAAAGCCGCGGCCGCGTCGACGCGTTCGGCGTCGCGCCTGCGCGCTATGTCGAGACGC GCGGCCGGCGGCCGCCCGATTTCGCGATCTTCAATCGGCAGACGAAGCAAATCGTGTTCACCGGCACGCCGAACTCGCTC GCGCTGCCCGACGGCGCGCAGGACCGCTTCAGCATGCTGATGCAACTCGCGGGCCTCGTCGGCGGCGATCCCGATGCGTA TCGCCCGGGCGTCACGCGCGAGTTCTTCGTCGTCGATCGCGACAGCGGCGAGACGTGGCCGATCACGACGATCGGCGACG AGACGATCTCGACGGGCATGGGCTCGCTCGATGCTAGGCATTTCATGCGGCTGCCGCGCCGCGCGGGCGACACGCGCCGC ATCGACATCTGGCTCGCGCCGTCGCTCGGCTGGCTGCCCGTGCGGATGGTTCAGACGGAACCGAACGGCGCGCAGATCGA ATTGCTGCTGCACCGGCGCACGAACGCAAACGGCGATGCGGACGTACACTCGGATACGAGCGCAAACACGGACGCAGACG CGAACGCCGACGGCGGCGCGGCGCCGGCCGCCGCCCCGGCATCCGCGTCCGGCGCGCCGTTGAACGCGAACGAGTCGGTA AATTCGACCGAGAAGACCGGCGGATCGCCGCGCCCGCCGCCGGCCGATCCCGGAGAACCGCAACCTTGA
Upstream 100 bases:
>100_bases ATCGCGCGCGCCCCGTTTCGTCGCCGTTCGAGAGGCCCGCCCGCCGCTGATGCCGTTGTCGTCCATCGTTTCGTCGAACC CGCGCGGCGCGGCGCGCCGC
Downstream 100 bases:
>100_bases CAATCTTTGACACCAACTTTCGTCCACCGGAGGAGAATCGGAAACGTTTTGAGGTCGTCGGCATCCAACCGATACGCCCT GTAAAAACGACCGGCGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Proline-Rich Signal Peptide Protein; Prolin-Rich Protein
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MRRAACVLALVLALHWLAALWLVRFREPFRPVEPDHVPVQVELLKPQPIERAPAPEKPAADRPRAAPKRAARAPAPPAHA PRASAPVSSAAESSTESSAESPAAASGTEPASAAGGQAAGATSGAAAGASGASAPPGEAAQGVKFALPPSADLQYDTFYN GMQNMPGTIHWRTDGGGYSLYVSMPVPFVGPYTYESRGRVDAFGVAPARYVETRGRRPPDFAIFNRQTKQIVFTGTPNSL ALPDGAQDRFSMLMQLAGLVGGDPDAYRPGVTREFFVVDRDSGETWPITTIGDETISTGMGSLDARHFMRLPRRAGDTRR IDIWLAPSLGWLPVRMVQTEPNGAQIELLLHRRTNANGDADVHSDTSANTDADANADGGAAPAAAPASASGAPLNANESV NSTEKTGGSPRPPPADPGEPQP
Sequences:
>Translated_422_residues MRRAACVLALVLALHWLAALWLVRFREPFRPVEPDHVPVQVELLKPQPIERAPAPEKPAADRPRAAPKRAARAPAPPAHA PRASAPVSSAAESSTESSAESPAAASGTEPASAAGGQAAGATSGAAAGASGASAPPGEAAQGVKFALPPSADLQYDTFYN GMQNMPGTIHWRTDGGGYSLYVSMPVPFVGPYTYESRGRVDAFGVAPARYVETRGRRPPDFAIFNRQTKQIVFTGTPNSL ALPDGAQDRFSMLMQLAGLVGGDPDAYRPGVTREFFVVDRDSGETWPITTIGDETISTGMGSLDARHFMRLPRRAGDTRR IDIWLAPSLGWLPVRMVQTEPNGAQIELLLHRRTNANGDADVHSDTSANTDADANADGGAAPAAAPASASGAPLNANESV NSTEKTGGSPRPPPADPGEPQP >Mature_422_residues MRRAACVLALVLALHWLAALWLVRFREPFRPVEPDHVPVQVELLKPQPIERAPAPEKPAADRPRAAPKRAARAPAPPAHA PRASAPVSSAAESSTESSAESPAAASGTEPASAAGGQAAGATSGAAAGASGASAPPGEAAQGVKFALPPSADLQYDTFYN GMQNMPGTIHWRTDGGGYSLYVSMPVPFVGPYTYESRGRVDAFGVAPARYVETRGRRPPDFAIFNRQTKQIVFTGTPNSL ALPDGAQDRFSMLMQLAGLVGGDPDAYRPGVTREFFVVDRDSGETWPITTIGDETISTGMGSLDARHFMRLPRRAGDTRR IDIWLAPSLGWLPVRMVQTEPNGAQIELLLHRRTNANGDADVHSDTSANTDADANADGGAAPAAAPASASGAPLNANESV NSTEKTGGSPRPPPADPGEPQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44198; Mature: 44198
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRAACVLALVLALHWLAALWLVRFREPFRPVEPDHVPVQVELLKPQPIERAPAPEKPAA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC DRPRAAPKRAARAPAPPAHAPRASAPVSSAAESSTESSAESPAAASGTEPASAAGGQAAG CCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC ATSGAAAGASGASAPPGEAAQGVKFALPPSADLQYDTFYNGMQNMPGTIHWRTDGGGYSL CCCCCCCCCCCCCCCCCHHHCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCEEE YVSMPVPFVGPYTYESRGRVDAFGVAPARYVETRGRRPPDFAIFNRQTKQIVFTGTPNSL EEECCCCCCCCCEECCCCCEEEECCCHHHHHHHCCCCCCCCEEECCCCCEEEEECCCCCC ALPDGAQDRFSMLMQLAGLVGGDPDAYRPGVTREFFVVDRDSGETWPITTIGDETISTGM CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEECEEECCCHHHHHCC GSLDARHFMRLPRRAGDTRRIDIWLAPSLGWLPVRMVQTEPNGAQIELLLHRRTNANGDA CCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCC DVHSDTSANTDADANADGGAAPAAAPASASGAPLNANESVNSTEKTGGSPRPPPADPGEP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC QP CC >Mature Secondary Structure MRRAACVLALVLALHWLAALWLVRFREPFRPVEPDHVPVQVELLKPQPIERAPAPEKPAA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC DRPRAAPKRAARAPAPPAHAPRASAPVSSAAESSTESSAESPAAASGTEPASAAGGQAAG CCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC ATSGAAAGASGASAPPGEAAQGVKFALPPSADLQYDTFYNGMQNMPGTIHWRTDGGGYSL CCCCCCCCCCCCCCCCCHHHCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCEEE YVSMPVPFVGPYTYESRGRVDAFGVAPARYVETRGRRPPDFAIFNRQTKQIVFTGTPNSL EEECCCCCCCCCEECCCCCEEEECCCHHHHHHHCCCCCCCCEEECCCCCEEEEECCCCCC ALPDGAQDRFSMLMQLAGLVGGDPDAYRPGVTREFFVVDRDSGETWPITTIGDETISTGM CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEECEEECCCHHHHHCC GSLDARHFMRLPRRAGDTRRIDIWLAPSLGWLPVRMVQTEPNGAQIELLLHRRTNANGDA CCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCC DVHSDTSANTDADANADGGAAPAAAPASASGAPLNANESVNSTEKTGGSPRPPPADPGEP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC QP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA