| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is cscK [H]
Identifier: 53717961
GI number: 53717961
Start: 340129
End: 341037
Strand: Reverse
Name: cscK [H]
Synonym: BPSL0320
Alternate gene names: 53717961
Gene position: 341037-340129 (Counterclockwise)
Preceding gene: 53717962
Following gene: 53717960
Centisome position: 8.37
GC content: 72.72
Gene sequence:
>909_bases ATGAGCGCAGGATTTCCGCAATTCGTATCGGCGGGCGACATTCTCACCGACATGGTGCGCACCGGCGGCGCGCACTGGAC CTCGCGCCCGGGCGGCGCGGGCTGGAACGTCGCGCGCGCGGTCGCGCGGCTCGGCGCGCCGAGCGCGTGCGCGGGCGCGG TGGGCCGCGACTGCTTCTCCGACGAGCTGTGGCGCGAAAGCGAGGCGGCCGGCCTCGATCTGCGCTTCCTGCAGCGCGTC GAGCGTGCGCCGCTCCTCGCGATCGTCCACGAGACGCAGCCCCCCGCGTATTTCTTCATCGGCGAGAACAGCGCCGATCT CGCCTTCGATCCGCAGCGGCTGCCCGACGGCTGGCGCGAGCACGTGAAGTGGGCGCATTTCGGCTGCATCAGCCTCGTGC GCGAGCCGCTCGCGTCGACGCTCGTCGCGCTCGCCGCCGAGCTGCGCGAAGCGGGCGTGAAGATCAGCTTCGATCCGAAC TACCGGAATCTGATGACGGACAGCTACCGGCCGACGCTCGCGAGGATGGCCGAACTCGCCGATCTGATCAAGGTGTCCGA CGAAGATCTGCGCCACCTGTTCGCGGGCGACGACGAAGCGAGCGCGATCGCGCGGCTGCGCGCGCTCAACCCGCGCGCGG CGCTGCTCGTCACGCGCGGGCCGGACACGGCGACGCTCTACGCGGGCGGCGAGACGATCGACGCACGGCCGCCGCGCATC GAGGTAGCCGATACGGTCGGCGCGGGCGACGCGACGATCGGCGGCCTGCTGTTCAGCCTGATGACGGTGCCGGCGCGCGG CTGGCGCGCGCATCTGTCGTTCGCGCTCGCGGCGGGCGCGGCGGCGTGCCGGCACACGGGCGCGCACGCGCCGACGCTCG ACGAAGTCGTCGCGCTCGTCGCGGCGTGA
Upstream 100 bases:
>100_bases GCAAGGGCGGCGGCAAGAGCGGCGGCACGGACGACCACGGCCACCGGGGCGAAGGCGACGCGGCCGACGGCGCCGGGCGC CGCCGCAATGGAGGCGCGCG
Downstream 100 bases:
>100_bases CGTACGCGCCGGCGGGCGCCGGCGCGGAAACGTTCCGCGCATGGAATGCCCGTCGAGGCGATTCTCGGCGGGTTGGCGGC TGCCTGCAGCGTGTTCCTGA
Product: PfkB family carbohydrate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MSAGFPQFVSAGDILTDMVRTGGAHWTSRPGGAGWNVARAVARLGAPSACAGAVGRDCFSDELWRESEAAGLDLRFLQRV ERAPLLAIVHETQPPAYFFIGENSADLAFDPQRLPDGWREHVKWAHFGCISLVREPLASTLVALAAELREAGVKISFDPN YRNLMTDSYRPTLARMAELADLIKVSDEDLRHLFAGDDEASAIARLRALNPRAALLVTRGPDTATLYAGGETIDARPPRI EVADTVGAGDATIGGLLFSLMTVPARGWRAHLSFALAAGAAACRHTGAHAPTLDEVVALVAA
Sequences:
>Translated_302_residues MSAGFPQFVSAGDILTDMVRTGGAHWTSRPGGAGWNVARAVARLGAPSACAGAVGRDCFSDELWRESEAAGLDLRFLQRV ERAPLLAIVHETQPPAYFFIGENSADLAFDPQRLPDGWREHVKWAHFGCISLVREPLASTLVALAAELREAGVKISFDPN YRNLMTDSYRPTLARMAELADLIKVSDEDLRHLFAGDDEASAIARLRALNPRAALLVTRGPDTATLYAGGETIDARPPRI EVADTVGAGDATIGGLLFSLMTVPARGWRAHLSFALAAGAAACRHTGAHAPTLDEVVALVAA >Mature_301_residues SAGFPQFVSAGDILTDMVRTGGAHWTSRPGGAGWNVARAVARLGAPSACAGAVGRDCFSDELWRESEAAGLDLRFLQRVE RAPLLAIVHETQPPAYFFIGENSADLAFDPQRLPDGWREHVKWAHFGCISLVREPLASTLVALAAELREAGVKISFDPNY RNLMTDSYRPTLARMAELADLIKVSDEDLRHLFAGDDEASAIARLRALNPRAALLVTRGPDTATLYAGGETIDARPPRIE VADTVGAGDATIGGLLFSLMTVPARGWRAHLSFALAAGAAACRHTGAHAPTLDEVVALVAA
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 32191; Mature: 32060
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGFPQFVSAGDILTDMVRTGGAHWTSRPGGAGWNVARAVARLGAPSACAGAVGRDCFS CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH DELWRESEAAGLDLRFLQRVERAPLLAIVHETQPPAYFFIGENSADLAFDPQRLPDGWRE HHHHHHHCCCCCCHHHHHHHHHCCEEEEEECCCCCEEEEEECCCCCCCCCHHHCCHHHHH HVKWAHFGCISLVREPLASTLVALAAELREAGVKISFDPNYRNLMTDSYRPTLARMAELA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCHHHHHHHHHH DLIKVSDEDLRHLFAGDDEASAIARLRALNPRAALLVTRGPDTATLYAGGETIDARPPRI HHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCEECCCCCEE EVADTVGAGDATIGGLLFSLMTVPARGWRAHLSFALAAGAAACRHTGAHAPTLDEVVALV EEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AA CC >Mature Secondary Structure SAGFPQFVSAGDILTDMVRTGGAHWTSRPGGAGWNVARAVARLGAPSACAGAVGRDCFS CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH DELWRESEAAGLDLRFLQRVERAPLLAIVHETQPPAYFFIGENSADLAFDPQRLPDGWRE HHHHHHHCCCCCCHHHHHHHHHCCEEEEEECCCCCEEEEEECCCCCCCCCHHHCCHHHHH HVKWAHFGCISLVREPLASTLVALAAELREAGVKISFDPNYRNLMTDSYRPTLARMAELA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCHHHHHHHHHH DLIKVSDEDLRHLFAGDDEASAIARLRALNPRAALLVTRGPDTATLYAGGETIDARPPRI HHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCEECCCCCEE EVADTVGAGDATIGGLLFSLMTVPARGWRAHLSFALAAGAAACRHTGAHAPTLDEVVALV EEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA