| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53717931
Identifier: 53717931
GI number: 53717931
Start: 302370
End: 303203
Strand: Reverse
Name: 53717931
Synonym: BPSL0290
Alternate gene names: NA
Gene position: 303203-302370 (Counterclockwise)
Preceding gene: 53717932
Following gene: 53717927
Centisome position: 7.44
GC content: 64.87
Gene sequence:
>834_bases ATGAAAAAGTTAGTGACGCTGATGATTGCCGGCGCGCTCGTCGCGCTGCCCTGCACGACGAACCTGAACGCCGCGCAGGC GGCGACGCGCGCGCCGGCCGTGGCGGGCTCGCCCGGCTCCGCGATCGTGTTCGTCAACGGCATCAACAACACGTTCGACG ATGCGATCGCCAGCCTGCAAGTGCTGAAGACCCAGCTGAACGCGCGCGACGCGAACAACGCATACGTGTACGGCAACGCG TACAACGCGACGCAAGGCGCGTTCAGCGATCTGTGGCAGGTGTTCAAGCAGAAGTCGGTCGAAGGCACGAGCCCGGCGGA TTTCTGGCGCGCGATCGACGGCGGCACGGTTCCCGCGGGCGGCATGGACGCGGCGCTGCAACAGAAATACATCGATATCC TGACGAAAAGCGAGACGCCCGAGCTGCCCGATCATCTGAACCAATACCGCGCGTATCTGCAGCAGAACCGCAAGGTGGTG CTCGTCGGCCACTCGCAGGGCACGCTGTACGCGAACTTCGAGATGAACCTGTTGATCACGGGGCCGGAGCGCGCGCAAGG CCGGATCAGCTCGGTGAACGTCGGCAACGCGGCGCGCTATCTGCTGCCGGGCTCGAGCTACCTGACGTCGTCGTCGGATA CGGTGATCGGCAGCCTCGGGCTCGTCCAGACGGTGATGCCGTCGAACTTCTCGCTCGGCCTGCACCTGTTCACCGATCCG CTCGGCCACTCGTTCACGAAGATCTACCTGAACCCGTCGTTCTCGGCGGCCAGGCAGATCCTCACGCAAGTGTCGCAGCA GGCGAACAGCGCGGCGAAGGCGGCCGTGCGCTGA
Upstream 100 bases:
>100_bases ACGATCCCGGCCCCGCATCGTGCGGTTTCAACCCGACAGCCATGCCGAATTGAGTTCACCGACGCCGTAGCGCATCAACC ACCATCTGAGGGGACTTTCG
Downstream 100 bases:
>100_bases AGCCGCGACGCGTGCGCAGCGCACGTTTCGCGCGCCGCGTGCGATGCCGGCACCCGCGATGCGCACCGGCACCGGCGCAC GCGCCGGCGGCGCGCCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MKKLVTLMIAGALVALPCTTNLNAAQAATRAPAVAGSPGSAIVFVNGINNTFDDAIASLQVLKTQLNARDANNAYVYGNA YNATQGAFSDLWQVFKQKSVEGTSPADFWRAIDGGTVPAGGMDAALQQKYIDILTKSETPELPDHLNQYRAYLQQNRKVV LVGHSQGTLYANFEMNLLITGPERAQGRISSVNVGNAARYLLPGSSYLTSSSDTVIGSLGLVQTVMPSNFSLGLHLFTDP LGHSFTKIYLNPSFSAARQILTQVSQQANSAAKAAVR
Sequences:
>Translated_277_residues MKKLVTLMIAGALVALPCTTNLNAAQAATRAPAVAGSPGSAIVFVNGINNTFDDAIASLQVLKTQLNARDANNAYVYGNA YNATQGAFSDLWQVFKQKSVEGTSPADFWRAIDGGTVPAGGMDAALQQKYIDILTKSETPELPDHLNQYRAYLQQNRKVV LVGHSQGTLYANFEMNLLITGPERAQGRISSVNVGNAARYLLPGSSYLTSSSDTVIGSLGLVQTVMPSNFSLGLHLFTDP LGHSFTKIYLNPSFSAARQILTQVSQQANSAAKAAVR >Mature_277_residues MKKLVTLMIAGALVALPCTTNLNAAQAATRAPAVAGSPGSAIVFVNGINNTFDDAIASLQVLKTQLNARDANNAYVYGNA YNATQGAFSDLWQVFKQKSVEGTSPADFWRAIDGGTVPAGGMDAALQQKYIDILTKSETPELPDHLNQYRAYLQQNRKVV LVGHSQGTLYANFEMNLLITGPERAQGRISSVNVGNAARYLLPGSSYLTSSSDTVIGSLGLVQTVMPSNFSLGLHLFTDP LGHSFTKIYLNPSFSAARQILTQVSQQANSAAKAAVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29500; Mature: 29500
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLVTLMIAGALVALPCTTNLNAAQAATRAPAVAGSPGSAIVFVNGINNTFDDAIASLQ CHHHHHHHHHHHHHEECCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHH VLKTQLNARDANNAYVYGNAYNATQGAFSDLWQVFKQKSVEGTSPADFWRAIDGGTVPAG HHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCC GMDAALQQKYIDILTKSETPELPDHLNQYRAYLQQNRKVVLVGHSQGTLYANFEMNLLIT CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEEEEEE GPERAQGRISSVNVGNAARYLLPGSSYLTSSSDTVIGSLGLVQTVMPSNFSLGLHLFTDP CCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHCCCCCEEEEEEEECC LGHSFTKIYLNPSFSAARQILTQVSQQANSAAKAAVR CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKLVTLMIAGALVALPCTTNLNAAQAATRAPAVAGSPGSAIVFVNGINNTFDDAIASLQ CHHHHHHHHHHHHHEECCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHH VLKTQLNARDANNAYVYGNAYNATQGAFSDLWQVFKQKSVEGTSPADFWRAIDGGTVPAG HHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCC GMDAALQQKYIDILTKSETPELPDHLNQYRAYLQQNRKVVLVGHSQGTLYANFEMNLLIT CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEEEEEE GPERAQGRISSVNVGNAARYLLPGSSYLTSSSDTVIGSLGLVQTVMPSNFSLGLHLFTDP CCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHCCCCCEEEEEEEECC LGHSFTKIYLNPSFSAARQILTQVSQQANSAAKAAVR CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA