Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is 53717885

Identifier: 53717885

GI number: 53717885

Start: 254128

End: 254691

Strand: Reverse

Name: 53717885

Synonym: BPSL0244

Alternate gene names: NA

Gene position: 254691-254128 (Counterclockwise)

Preceding gene: 53717896

Following gene: 53717884

Centisome position: 6.25

GC content: 71.99

Gene sequence:

>564_bases
ATGATTCCGTTTAAGCGCAAGATGTTCGCCAGTCCCGCCTCCCGGCCCGCCCGCGCCGGAAAATTCGTGCTTGAAGCCTG
CTTCGCGGGCGCGCTTGCCGGCGCCGCGCATGCGCAAGGCGCGCCGCAGCCCGTGGTCGATTGGGAGATCCAGGTAGTAC
GCGACGGCCAGACGATCGATGCGTTCGAGCAGAAGACCACCGTCGGCCAGGCCCGCTCGGACACGCACAGCTTGCCCATC
GCGCCGGCGGCGGGCTGCGCCGCGACATCCGCGGCCGCGTCGGCGGCCGATGCTCCCGGCTCCGGCCTGTCGCGCACGAT
CACCGTCGCGCCGCTGTACGTCGAAGACGGCGCGGTCGCGCTCGCGATCGACGCGCAGGAAACGCTCGCCGACGAACGCG
CGACGCCGCCCGCCGGCGCGCCATGCACGTTTGCGCTGCCGCGGCGGATCGTCGCAAGCCATCCGGGCCTGAACGCGCGC
GCCGCGCAATGGACCGACTGGACGCTCGCCGAGCGCAACCCGCAACTCGTCTACCGCGTGCGCGCACGCGTCGTCGAGGA
CTGA

Upstream 100 bases:

>100_bases
TTGAAAAATCCGCGCGTCGCGCACATGTCGTCGATGTTCCCGATAACGGCGCCGCGTGCGAAAGTTGAACCGAGCACAAA
CCCGCGCGGTCCGAAGTTCG

Downstream 100 bases:

>100_bases
GCGGCCATGCACGTTCCCCAAACCGCGCCGCTCGCCGAGCCGCTGCCCGTCGCCGACGAAATCACCGCGGTCAGCTGGAA
TCTGCACAAGGGGCGCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MIPFKRKMFASPASRPARAGKFVLEACFAGALAGAAHAQGAPQPVVDWEIQVVRDGQTIDAFEQKTTVGQARSDTHSLPI
APAAGCAATSAAASAADAPGSGLSRTITVAPLYVEDGAVALAIDAQETLADERATPPAGAPCTFALPRRIVASHPGLNAR
AAQWTDWTLAERNPQLVYRVRARVVED

Sequences:

>Translated_187_residues
MIPFKRKMFASPASRPARAGKFVLEACFAGALAGAAHAQGAPQPVVDWEIQVVRDGQTIDAFEQKTTVGQARSDTHSLPI
APAAGCAATSAAASAADAPGSGLSRTITVAPLYVEDGAVALAIDAQETLADERATPPAGAPCTFALPRRIVASHPGLNAR
AAQWTDWTLAERNPQLVYRVRARVVED
>Mature_187_residues
MIPFKRKMFASPASRPARAGKFVLEACFAGALAGAAHAQGAPQPVVDWEIQVVRDGQTIDAFEQKTTVGQARSDTHSLPI
APAAGCAATSAAASAADAPGSGLSRTITVAPLYVEDGAVALAIDAQETLADERATPPAGAPCTFALPRRIVASHPGLNAR
AAQWTDWTLAERNPQLVYRVRARVVED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19511; Mature: 19511

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPFKRKMFASPASRPARAGKFVLEACFAGALAGAAHAQGAPQPVVDWEIQVVRDGQTID
CCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHH
AFEQKTTVGQARSDTHSLPIAPAAGCAATSAAASAADAPGSGLSRTITVAPLYVEDGAVA
HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCEEE
LAIDAQETLADERATPPAGAPCTFALPRRIVASHPGLNARAAQWTDWTLAERNPQLVYRV
EEECCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCCHHHEEEE
RARVVED
HHHHCCC
>Mature Secondary Structure
MIPFKRKMFASPASRPARAGKFVLEACFAGALAGAAHAQGAPQPVVDWEIQVVRDGQTID
CCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHH
AFEQKTTVGQARSDTHSLPIAPAAGCAATSAAASAADAPGSGLSRTITVAPLYVEDGAVA
HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCEEE
LAIDAQETLADERATPPAGAPCTFALPRRIVASHPGLNARAAQWTDWTLAERNPQLVYRV
EEECCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCCHHHEEEE
RARVVED
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA