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The map label for this gene is fliH [H]

Identifier: 53717870

GI number: 53717870

Start: 238889

End: 239569

Strand: Reverse

Name: fliH [H]

Synonym: BPSL0228

Alternate gene names: 53717870

Gene position: 239569-238889 (Counterclockwise)

Preceding gene: 53717871

Following gene: 53717869

Centisome position: 5.88

GC content: 73.72

Gene sequence:

>681_bases
ATGTCTGATCGCGCGAGCGCGTCGGACAAGCCCGTCACCGCATACCAGCGGTGGGAGATGGCTTCGTTCGATCCCCCGCC
GCCGCCGCCGCCCGATGACGGCGGCGCGGCGGCGGCCGCGCTCGCCGCCGAACTGCAGCGCGTGCGCGACGCCGCGCACG
CGGAAGGGCTCGCCGCCGGCCACGTCGAAGGCCAGGCGCTCGGCTATCAGGCCGGTTACGAGCAGGGACGCGCGAAGGGC
TTCGACGAAGGCCAGGCCGAAGCGCACACGCACGCCGCGCAGCTCGCCGCGCTCGCCGCTTCGTTTCGCGACGCGCTCGC
GGGCGTCGAGCGCGATCTCGCCGACGACATCGCGACGCTCGCGCTCGAGATCGCGCAGCAGGTCGTGCGCCAGCACGTGC
AGCACGATCCGGCCGCGCTGATCGCGGCCGCGCGCGAAGTGCTGGCCGCGGAGCCCGCGCTCGCCGGCGCGCCGCATCTG
ATCGTGAATCCCGCGGACTTGCCCGTCGTCGAGGCGTATCTGAAGGACGAGCTCGACACGCTCGGCTGGAGCGTGCGCAC
CGATACGAGCATCGAGCGCGGCGGCTGCCGTGCGCACGCGTCGACGGGCGAAATCGACGCGACGCTCACGACCCGCTGGG
AGCGGGTCGCGGCCGCGCTCGGCAAGGTGAGCGCATGGTGA

Upstream 100 bases:

>100_bases
GTGTCCGAAGTCGAGACGCAGCAGCGCAAGATCCTGCAGGTCGTGCGCAATCTCGCCGAGAGCGGCCAGATCGTGATCGG
CGGCAAGGCGGAAGACGCTT

Downstream 100 bases:

>100_bases
GCGACGTCTGCGGCGGCGCGCTCGGCCGCGACGAACTCGACGCGCTCGAACGCGAGCTCGCGCTCGCATCGCGCGGCCCC
GAGCACGAAGACGCGGCCGC

Product: flagellar assembly protein H

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSDRASASDKPVTAYQRWEMASFDPPPPPPPDDGGAAAAALAAELQRVRDAAHAEGLAAGHVEGQALGYQAGYEQGRAKG
FDEGQAEAHTHAAQLAALAASFRDALAGVERDLADDIATLALEIAQQVVRQHVQHDPAALIAAAREVLAAEPALAGAPHL
IVNPADLPVVEAYLKDELDTLGWSVRTDTSIERGGCRAHASTGEIDATLTTRWERVAAALGKVSAW

Sequences:

>Translated_226_residues
MSDRASASDKPVTAYQRWEMASFDPPPPPPPDDGGAAAAALAAELQRVRDAAHAEGLAAGHVEGQALGYQAGYEQGRAKG
FDEGQAEAHTHAAQLAALAASFRDALAGVERDLADDIATLALEIAQQVVRQHVQHDPAALIAAAREVLAAEPALAGAPHL
IVNPADLPVVEAYLKDELDTLGWSVRTDTSIERGGCRAHASTGEIDATLTTRWERVAAALGKVSAW
>Mature_225_residues
SDRASASDKPVTAYQRWEMASFDPPPPPPPDDGGAAAAALAAELQRVRDAAHAEGLAAGHVEGQALGYQAGYEQGRAKGF
DEGQAEAHTHAAQLAALAASFRDALAGVERDLADDIATLALEIAQQVVRQHVQHDPAALIAAAREVLAAEPALAGAPHLI
VNPADLPVVEAYLKDELDTLGWSVRTDTSIERGGCRAHASTGEIDATLTTRWERVAAALGKVSAW

Specific function: Needed for flagellar regrowth and assembly [H]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliH family [H]

Homologues:

Organism=Escherichia coli, GI87082004, Length=169, Percent_Identity=34.9112426035503, Blast_Score=101, Evalue=4e-23,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000563
- InterPro:   IPR018035 [H]

Pfam domain/function: PF02108 FliH [H]

EC number: NA

Molecular weight: Translated: 23618; Mature: 23487

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRASASDKPVTAYQRWEMASFDPPPPPPPDDGGAAAAALAAELQRVRDAAHAEGLAAG
CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
HVEGQALGYQAGYEQGRAKGFDEGQAEAHTHAAQLAALAASFRDALAGVERDLADDIATL
CCCCCHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALEIAQQVVRQHVQHDPAALIAAAREVLAAEPALAGAPHLIVNPADLPVVEAYLKDELDT
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHH
LGWSVRTDTSIERGGCRAHASTGEIDATLTTRWERVAAALGKVSAW
HCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDRASASDKPVTAYQRWEMASFDPPPPPPPDDGGAAAAALAAELQRVRDAAHAEGLAAG
CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
HVEGQALGYQAGYEQGRAKGFDEGQAEAHTHAAQLAALAASFRDALAGVERDLADDIATL
CCCCCHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALEIAQQVVRQHVQHDPAALIAAAREVLAAEPALAGAPHLIVNPADLPVVEAYLKDELDT
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHH
LGWSVRTDTSIERGGCRAHASTGEIDATLTTRWERVAAALGKVSAW
HCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 8224881 [H]