BacMap

Definition	Bacillus licheniformis ATCC 14580, complete genome.
Accession	NC_006322
Length	4,222,645

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The map label for this gene is yybO [H]

Identifier: 52788032

GI number: 52788032

Start: 4205410

End: 4206711

Strand: Direct

Name: yybO [H]

Synonym: BLi04360

Alternate gene names: 52788032

Gene position: 4205410-4206711 (Clockwise)

Preceding gene: 52788029

Following gene: 52788039

Centisome position: 99.59

GC content: 46.54

Gene sequence:

>1302_bases
ATGGCGCAAGAGCTGGAAAAACGGCCGGGGCATACAAGATGGTATATTTCTTCTTTATTAAGCAGCATGATCATTTTAAA
TTACTTTGACCGTGTTGCCATTTCAGTCGCAGCTCCTGCGATACAGGATTCCTTTCAATTGACGGCAACCCAATTAGGCA
TCGTCTTTTCCATCTATACCTACTCATACACGCTGATGCAGATTCCGGTGGGGAGTCTCTTGGATAAGTACGGCGTTGCC
TGGGTGACAAGGGTCGGAATGACCTTGTGGAGTTTTCTAACCATTATATTGGCTTTTTTACAGGGAAAACTGCTTCTTTA
TATTGTCAGATTTTTAATCGGGCTGACGAGTGCTTCAGCTTTTCCTGCCGCATCCAAAGCAACGGCCTTATGGTTTCCGC
CTAATGAGCGCGGCCTTGCCAATTCCTTGTTTGACTCGGCAGCCAAGTTCGCGAATGTCATCGGCGCGCCTCTCGTAGCC
TTTTTAGTTACGACATTCGACTGGCGAGCCGCTTTTTTAACGATCGGAATCATTAATGTACTGTTCACCGTATTTTTCTG
GTTGTATTATGAACAGCCCGATCGGCACAAACGAATCTCAAAGGAAGAGCTCCATTATATTCAAAAGCATAATGCCGTAT
CAGAGGAAGATATCTCGGAACGGACGCTTATTGCTTTAAAAGCGATGCTGACAAACCGTAAAGTATGGGGGCTGATGATC
GGATTTACGGGTTACGGCTATACATTCAACCTGCTCTTAACCTGGCTGCCGACCTTCTTTAAAGAAACATACGGAATGGA
CATTATGTCCTCAGGGCTGTTTACAGCGGTTCCCTGGCTGATATCGACGGTTTCCGGAATCGTTGTGGGCGGATGGCTCG
TCGATTTTTTAATTCAAAAGGGGCATTCGAATACAAAGGTATACCAGACCATTATCGTAATCGGCATGAGCCTTGGATTT
GCCTTTCTGGGAGCTGTTTTCACGCACAACATCACGATTGCGATCATTTGCATTTCCGTCGGCTTAGCCGGAATATCTGC
GACCGCGCCTATCGGCTGGTCGATATCAGCCGATATTGCACCGGTTGGTTCCATCTCTCTGCTCAGTTCAATGGTCAATT
TGGCAAATAACTTATTCGGAGGGATTATCGCGGTTTCATTAACGGGCTATCTGGTCGATGTGACCGGTTCATTTACGCTC
AGCTTTTTAGTAGCCGGATTTGTATTACTGCTCGGGCTCGTGTTCTACCTCGCAGTCCTCGGCGATATAAAGCGAATTCG
TATTGGCAAGCAGAAAACCTGA

Upstream 100 bases:

>100_bases
GCGGCCGTTTACTCCCCGCACTCCCGTGGAAATAAACACGAAGAAATTAAGAATGTAATTTTGAAAAGAGTCCAATCTAA
GGATTAGAGGGGGTTTCAAC

Downstream 100 bases:

>100_bases
ATGCTGAAGGAAACGACCCGGCTTTTGATAAATAAAAAAAGAACAAGACCGCATTGGGTCTTGTTCCTTTTATCGGCTTA
CTCGCCTGCTACGTATGGAA

Product: YybO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MAQELEKRPGHTRWYISSLLSSMIILNYFDRVAISVAAPAIQDSFQLTATQLGIVFSIYTYSYTLMQIPVGSLLDKYGVA
WVTRVGMTLWSFLTIILAFLQGKLLLYIVRFLIGLTSASAFPAASKATALWFPPNERGLANSLFDSAAKFANVIGAPLVA
FLVTTFDWRAAFLTIGIINVLFTVFFWLYYEQPDRHKRISKEELHYIQKHNAVSEEDISERTLIALKAMLTNRKVWGLMI
GFTGYGYTFNLLLTWLPTFFKETYGMDIMSSGLFTAVPWLISTVSGIVVGGWLVDFLIQKGHSNTKVYQTIIVIGMSLGF
AFLGAVFTHNITIAIICISVGLAGISATAPIGWSISADIAPVGSISLLSSMVNLANNLFGGIIAVSLTGYLVDVTGSFTL
SFLVAGFVLLLGLVFYLAVLGDIKRIRIGKQKT

Sequences:

>Translated_433_residues
MAQELEKRPGHTRWYISSLLSSMIILNYFDRVAISVAAPAIQDSFQLTATQLGIVFSIYTYSYTLMQIPVGSLLDKYGVA
WVTRVGMTLWSFLTIILAFLQGKLLLYIVRFLIGLTSASAFPAASKATALWFPPNERGLANSLFDSAAKFANVIGAPLVA
FLVTTFDWRAAFLTIGIINVLFTVFFWLYYEQPDRHKRISKEELHYIQKHNAVSEEDISERTLIALKAMLTNRKVWGLMI
GFTGYGYTFNLLLTWLPTFFKETYGMDIMSSGLFTAVPWLISTVSGIVVGGWLVDFLIQKGHSNTKVYQTIIVIGMSLGF
AFLGAVFTHNITIAIICISVGLAGISATAPIGWSISADIAPVGSISLLSSMVNLANNLFGGIIAVSLTGYLVDVTGSFTL
SFLVAGFVLLLGLVFYLAVLGDIKRIRIGKQKT
>Mature_432_residues
AQELEKRPGHTRWYISSLLSSMIILNYFDRVAISVAAPAIQDSFQLTATQLGIVFSIYTYSYTLMQIPVGSLLDKYGVAW
VTRVGMTLWSFLTIILAFLQGKLLLYIVRFLIGLTSASAFPAASKATALWFPPNERGLANSLFDSAAKFANVIGAPLVAF
LVTTFDWRAAFLTIGIINVLFTVFFWLYYEQPDRHKRISKEELHYIQKHNAVSEEDISERTLIALKAMLTNRKVWGLMIG
FTGYGYTFNLLLTWLPTFFKETYGMDIMSSGLFTAVPWLISTVSGIVVGGWLVDFLIQKGHSNTKVYQTIIVIGMSLGFA
FLGAVFTHNITIAIICISVGLAGISATAPIGWSISADIAPVGSISLLSSMVNLANNLFGGIIAVSLTGYLVDVTGSFTLS
FLVAGFVLLLGLVFYLAVLGDIKRIRIGKQKT

Specific function: Uptake Of D-Galactarate. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Homo sapiens, GI6912666, Length=394, Percent_Identity=27.6649746192893, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI154350196, Length=410, Percent_Identity=24.6341463414634, Blast_Score=109, Evalue=6e-24,
Organism=Homo sapiens, GI9966811, Length=410, Percent_Identity=25.609756097561, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI21322234, Length=398, Percent_Identity=27.3869346733668, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI9945322, Length=390, Percent_Identity=26.4102564102564, Blast_Score=100, Evalue=5e-21,
Organism=Homo sapiens, GI148743791, Length=404, Percent_Identity=24.7524752475248, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI5031955, Length=280, Percent_Identity=26.4285714285714, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI4885441, Length=413, Percent_Identity=23.728813559322, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI148728191, Length=310, Percent_Identity=24.8387096774194, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI154800443, Length=392, Percent_Identity=24.234693877551, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI1789515, Length=444, Percent_Identity=31.7567567567568, Blast_Score=224, Evalue=1e-59,
Organism=Escherichia coli, GI1789152, Length=449, Percent_Identity=31.6258351893096, Blast_Score=200, Evalue=1e-52,
Organism=Escherichia coli, GI87082320, Length=425, Percent_Identity=28.7058823529412, Blast_Score=185, Evalue=6e-48,
Organism=Escherichia coli, GI2367379, Length=402, Percent_Identity=28.8557213930348, Blast_Score=184, Evalue=8e-48,
Organism=Escherichia coli, GI2367193, Length=430, Percent_Identity=24.8837209302326, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI87082071, Length=398, Percent_Identity=25.6281407035176, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1788573, Length=413, Percent_Identity=21.5496368038741, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI71997452, Length=384, Percent_Identity=29.4270833333333, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI115533554, Length=328, Percent_Identity=27.1341463414634, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI115533556, Length=360, Percent_Identity=26.6666666666667, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI17554148, Length=364, Percent_Identity=27.4725274725275, Blast_Score=104, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI17554962, Length=332, Percent_Identity=26.5060240963855, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17552542, Length=362, Percent_Identity=29.0055248618785, Blast_Score=99, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17560030, Length=328, Percent_Identity=24.6951219512195, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI193208223, Length=331, Percent_Identity=24.1691842900302, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17563054, Length=331, Percent_Identity=23.8670694864048, Blast_Score=81, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17532009, Length=375, Percent_Identity=21.3333333333333, Blast_Score=81, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17569727, Length=323, Percent_Identity=24.4582043343653, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI193205400, Length=267, Percent_Identity=25.4681647940075, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17535049, Length=285, Percent_Identity=22.1052631578947, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI32565916, Length=250, Percent_Identity=24, Blast_Score=78, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI71991448, Length=316, Percent_Identity=23.4177215189873, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI32565914, Length=250, Percent_Identity=24, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71991453, Length=316, Percent_Identity=23.4177215189873, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17540458, Length=250, Percent_Identity=24.8, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17560966, Length=290, Percent_Identity=24.4827586206897, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI115534558, Length=233, Percent_Identity=26.6094420600858, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17557432, Length=185, Percent_Identity=25.4054054054054, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI115534564, Length=185, Percent_Identity=25.4054054054054, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17561498, Length=186, Percent_Identity=27.9569892473118, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17566884, Length=311, Percent_Identity=23.1511254019293, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI115533871, Length=308, Percent_Identity=24.025974025974, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17562692, Length=195, Percent_Identity=27.1794871794872, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17536545, Length=302, Percent_Identity=22.8476821192053, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71983953, Length=192, Percent_Identity=26.5625, Blast_Score=65, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI25145142, Length=279, Percent_Identity=23.6559139784946, Blast_Score=65, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24654215, Length=397, Percent_Identity=28.9672544080605, Blast_Score=129, Evalue=3e-30,
Organism=Drosophila melanogaster, GI19922400, Length=397, Percent_Identity=28.9672544080605, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24639764, Length=427, Percent_Identity=26.9320843091335, Blast_Score=121, Evalue=8e-28,
Organism=Drosophila melanogaster, GI24641682, Length=315, Percent_Identity=27.3015873015873, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI62484226, Length=378, Percent_Identity=28.5714285714286, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24584153, Length=318, Percent_Identity=24.8427672955975, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI28573708, Length=385, Percent_Identity=24.9350649350649, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI28573707, Length=385, Percent_Identity=24.9350649350649, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24583789, Length=284, Percent_Identity=27.112676056338, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24648416, Length=407, Percent_Identity=27.027027027027, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI21356189, Length=407, Percent_Identity=27.027027027027, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI28573299, Length=438, Percent_Identity=24.6575342465753, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24653727, Length=361, Percent_Identity=26.0387811634349, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI20130167, Length=363, Percent_Identity=23.6914600550964, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI19920686, Length=435, Percent_Identity=21.1494252873563, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI45550460, Length=429, Percent_Identity=24.4755244755245, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24658666, Length=456, Percent_Identity=24.5614035087719, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24655255, Length=418, Percent_Identity=24.1626794258373, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI20129235, Length=404, Percent_Identity=26.7326732673267, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI20130135, Length=272, Percent_Identity=25, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24658658, Length=430, Percent_Identity=24.1860465116279, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24655271, Length=272, Percent_Identity=25, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24580790, Length=283, Percent_Identity=22.2614840989399, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI45550495, Length=451, Percent_Identity=24.1685144124169, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI281361682, Length=246, Percent_Identity=23.9837398373984, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24658674, Length=399, Percent_Identity=24.812030075188, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI221474708, Length=197, Percent_Identity=28.9340101522843, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24658689, Length=365, Percent_Identity=23.2876712328767, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45552797, Length=365, Percent_Identity=23.2876712328767, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47598; Mature: 47466

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQELEKRPGHTRWYISSLLSSMIILNYFDRVAISVAAPAIQDSFQLTATQLGIVFSIYT
CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSYTLMQIPVGSLLDKYGVAWVTRVGMTLWSFLTIILAFLQGKLLLYIVRFLIGLTSASA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
FPAASKATALWFPPNERGLANSLFDSAAKFANVIGAPLVAFLVTTFDWRAAFLTIGIINV
CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFTVFFWLYYEQPDRHKRISKEELHYIQKHNAVSEEDISERTLIALKAMLTNRKVWGLMI
HHHHHHHHHHCCCHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE
GFTGYGYTFNLLLTWLPTFFKETYGMDIMSSGLFTAVPWLISTVSGIVVGGWLVDFLIQK
ECCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GHSNTKVYQTIIVIGMSLGFAFLGAVFTHNITIAIICISVGLAGISATAPIGWSISADIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PVGSISLLSSMVNLANNLFGGIIAVSLTGYLVDVTGSFTLSFLVAGFVLLLGLVFYLAVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
GDIKRIRIGKQKT
CCHHHHCCCCCCC
>Mature Secondary Structure 
AQELEKRPGHTRWYISSLLSSMIILNYFDRVAISVAAPAIQDSFQLTATQLGIVFSIYT
CCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSYTLMQIPVGSLLDKYGVAWVTRVGMTLWSFLTIILAFLQGKLLLYIVRFLIGLTSASA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
FPAASKATALWFPPNERGLANSLFDSAAKFANVIGAPLVAFLVTTFDWRAAFLTIGIINV
CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFTVFFWLYYEQPDRHKRISKEELHYIQKHNAVSEEDISERTLIALKAMLTNRKVWGLMI
HHHHHHHHHHCCCHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE
GFTGYGYTFNLLLTWLPTFFKETYGMDIMSSGLFTAVPWLISTVSGIVVGGWLVDFLIQK
ECCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GHSNTKVYQTIIVIGMSLGFAFLGAVFTHNITIAIICISVGLAGISATAPIGWSISADIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PVGSISLLSSMVNLANNLFGGIIAVSLTGYLVDVTGSFTLSFLVAGFVLLLGLVFYLAVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
GDIKRIRIGKQKT
CCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]