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The map label for this gene is yycB [H]

Identifier: 52788019

GI number: 52788019

Start: 4192502

End: 4193707

Strand: Direct

Name: yycB [H]

Synonym: BLi04347

Alternate gene names: 52788019

Gene position: 4192502-4193707 (Clockwise)

Preceding gene: 52788018

Following gene: 52788020

Centisome position: 99.29

GC content: 51.74

Gene sequence:

>1206_bases
ATGCATTACATTGACGCTCGACGCGCCCGTTTGAACAATATCTTTTTGATTGCAGGAATCATATTTATCGCTTTTAATTT
AAGACCGGCTATTACAGCTGTCGGGCCATTGATCAGTTCGATCCGCTCGGATATGGATTTGACGAACGGCATGGCCGGCT
TCTTGACGACGCTGCCGCTGTTATCGTTCGCCGTCCTGTCCCCGGTCGCCCCTAAGCTCGGACAGAAGCTTGGCAATGAG
AGAACCCTCTGGGTCGGATTGGTCATCTTATTGATCGGAATTTTGCTGCGCTCTTACGGAGAATCTATTACATTATTTGC
AGGAACCGCATTGATCGGAGTCGGCATCGCAATCTGCAATGTGCTGCTGCCCAGCCTGATCAAACATAAATTTCCTGACA
AAGCGGGAATTATGACAAGTTTCTATACAACAGCCATGTCGATTTTTGCGGCGCTCGCATCAGGGATCAGCATTCCGTTG
TCGCACGGCTTAGCGTGGGGATGGAGCGCGTCGCTCATGGTTTGGGCGGGCCTCGCGTTTGTTGCGATTTTGATCTGGGT
TCCCCAGCTCCGCTATCATGATACGGGAAACCGCACGGTCAGCTTAAAGGCAGACGGCCAAACGGTCTGGCGCTCGAAAA
TTGCCTGGCAGGTCACATTCTTTATGGGCATACAGTCGTTTTTGTTTTACTGCACGATCGCCTGGCTGCCTGAAATTCTC
CGCTCGCACGGGATGAGCATGTCGCTTGCCGGCTGGATGCTGTCGCTGATGCAGTTTGCCAGCCTCCCGTCGACATTTTT
GACTCCGGTTCTCGCCGGGCGGTTTCAAAACCAGAAAAGCATCGTGCTCGCCCTCGGCATCCTATACTTGGCGGGGATGT
CAGGGCTATTGTACGGAGGCAGTACAGCGATGCTGACGCTATGGGTCATTTTAATCGGAATTGGACAAGGGTCCAGCATC
AGTTTAGCCTTGACTTTAATCGGGCTGAGAAGCGAAAATGCCGATCAAGCCGCGGCATTATCAGGGATGTCGCAATCCGC
CGGATATTTGCTGGCAGCGATTGGTCCAAGCTTTGTCGGTTTTCTTTACGATCACATGCACTCATGGAACGGACCGATTT
TACTGTTCATCGGCGCGCTGGTCGCTTTGATCGGTGCAGGACTCGGTGCGGGAAGAAATCAATATATCTATGCTAAAGCA
GCATAA

Upstream 100 bases:

>100_bases
ATTGCCGAAATTCAGAAGAAAGATCAATAGTAACCTTGGATGATGGTCCGGGTTTCTTTTTCATGTCACTTTTCCACCTG
GAAGCAAAGGAGAATACAGC

Downstream 100 bases:

>100_bases
CGAAGCCGGCAGATAAGCCGGCTTTTTTTTTGGAATATAACCTGACAAACCAGCGGCCAAATAAACCGTGATGCCGTATG
ATCAGATTTGACAAAAATAA

Product: YycB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MHYIDARRARLNNIFLIAGIIFIAFNLRPAITAVGPLISSIRSDMDLTNGMAGFLTTLPLLSFAVLSPVAPKLGQKLGNE
RTLWVGLVILLIGILLRSYGESITLFAGTALIGVGIAICNVLLPSLIKHKFPDKAGIMTSFYTTAMSIFAALASGISIPL
SHGLAWGWSASLMVWAGLAFVAILIWVPQLRYHDTGNRTVSLKADGQTVWRSKIAWQVTFFMGIQSFLFYCTIAWLPEIL
RSHGMSMSLAGWMLSLMQFASLPSTFLTPVLAGRFQNQKSIVLALGILYLAGMSGLLYGGSTAMLTLWVILIGIGQGSSI
SLALTLIGLRSENADQAAALSGMSQSAGYLLAAIGPSFVGFLYDHMHSWNGPILLFIGALVALIGAGLGAGRNQYIYAKA
A

Sequences:

>Translated_401_residues
MHYIDARRARLNNIFLIAGIIFIAFNLRPAITAVGPLISSIRSDMDLTNGMAGFLTTLPLLSFAVLSPVAPKLGQKLGNE
RTLWVGLVILLIGILLRSYGESITLFAGTALIGVGIAICNVLLPSLIKHKFPDKAGIMTSFYTTAMSIFAALASGISIPL
SHGLAWGWSASLMVWAGLAFVAILIWVPQLRYHDTGNRTVSLKADGQTVWRSKIAWQVTFFMGIQSFLFYCTIAWLPEIL
RSHGMSMSLAGWMLSLMQFASLPSTFLTPVLAGRFQNQKSIVLALGILYLAGMSGLLYGGSTAMLTLWVILIGIGQGSSI
SLALTLIGLRSENADQAAALSGMSQSAGYLLAAIGPSFVGFLYDHMHSWNGPILLFIGALVALIGAGLGAGRNQYIYAKA
A
>Mature_401_residues
MHYIDARRARLNNIFLIAGIIFIAFNLRPAITAVGPLISSIRSDMDLTNGMAGFLTTLPLLSFAVLSPVAPKLGQKLGNE
RTLWVGLVILLIGILLRSYGESITLFAGTALIGVGIAICNVLLPSLIKHKFPDKAGIMTSFYTTAMSIFAALASGISIPL
SHGLAWGWSASLMVWAGLAFVAILIWVPQLRYHDTGNRTVSLKADGQTVWRSKIAWQVTFFMGIQSFLFYCTIAWLPEIL
RSHGMSMSLAGWMLSLMQFASLPSTFLTPVLAGRFQNQKSIVLALGILYLAGMSGLLYGGSTAMLTLWVILIGIGQGSSI
SLALTLIGLRSENADQAAALSGMSQSAGYLLAAIGPSFVGFLYDHMHSWNGPILLFIGALVALIGAGLGAGRNQYIYAKA
A

Specific function: Unknown

COG id: COG2807

COG function: function code P; Cyanate permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]

Homologues:

Organism=Escherichia coli, GI1788092, Length=387, Percent_Identity=41.343669250646, Blast_Score=255, Evalue=3e-69,
Organism=Escherichia coli, GI1786536, Length=368, Percent_Identity=26.3586956521739, Blast_Score=102, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004747
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42906; Mature: 42906

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYIDARRARLNNIFLIAGIIFIAFNLRPAITAVGPLISSIRSDMDLTNGMAGFLTTLPL
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LSFAVLSPVAPKLGQKLGNERTLWVGLVILLIGILLRSYGESITLFAGTALIGVGIAICN
HHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHH
VLLPSLIKHKFPDKAGIMTSFYTTAMSIFAALASGISIPLSHGLAWGWSASLMVWAGLAF
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHH
VAILIWVPQLRYHDTGNRTVSLKADGQTVWRSKIAWQVTFFMGIQSFLFYCTIAWLPEIL
HHHHHHHCCCEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSHGMSMSLAGWMLSLMQFASLPSTFLTPVLAGRFQNQKSIVLALGILYLAGMSGLLYGG
HHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHCCC
STAMLTLWVILIGIGQGSSISLALTLIGLRSENADQAAALSGMSQSAGYLLAAIGPSFVG
HHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHCCCCCCCEEEEHHHHHHHH
FLYDHMHSWNGPILLFIGALVALIGAGLGAGRNQYIYAKAA
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
>Mature Secondary Structure
MHYIDARRARLNNIFLIAGIIFIAFNLRPAITAVGPLISSIRSDMDLTNGMAGFLTTLPL
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LSFAVLSPVAPKLGQKLGNERTLWVGLVILLIGILLRSYGESITLFAGTALIGVGIAICN
HHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHH
VLLPSLIKHKFPDKAGIMTSFYTTAMSIFAALASGISIPLSHGLAWGWSASLMVWAGLAF
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHH
VAILIWVPQLRYHDTGNRTVSLKADGQTVWRSKIAWQVTFFMGIQSFLFYCTIAWLPEIL
HHHHHHHCCCEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSHGMSMSLAGWMLSLMQFASLPSTFLTPVLAGRFQNQKSIVLALGILYLAGMSGLLYGG
HHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHCCC
STAMLTLWVILIGIGQGSSISLALTLIGLRSENADQAAALSGMSQSAGYLLAAIGPSFVG
HHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHCCCCCCCEEEEHHHHHHHH
FLYDHMHSWNGPILLFIGALVALIGAGLGAGRNQYIYAKAA
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]