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The map label for this gene is yokA [H]

Identifier: 52787998

GI number: 52787998

Start: 4172854

End: 4173996

Strand: Direct

Name: yokA [H]

Synonym: BLi04322

Alternate gene names: 52787998

Gene position: 4172854-4173996 (Clockwise)

Preceding gene: 52787997

Following gene: 52787999

Centisome position: 98.82

GC content: 32.02

Gene sequence:

>1143_bases
ATGTCATTAGTTGCTGAATTAGAAAGAGATATGATTATTTTCCGAACAAACTCTGGCATGGAAAAAAGAGCTTCTGAAGG
ACATTTTAATGGAGGCGTAATTTATGGATATGCATCAAAGAATAAGAAACTTAAAATTGTGCCTGAAGAAGCAAAAGTCA
TAAATTATATTTTTGAGAAGTATGCGATAAATCAGTGGGGTTATAGAAAAATAGCGTCACACCTAAATACTTTAGGTATC
ACTACTAAAAAAAATAATTTATGGTCAATAACTGCCGTAAAAACGATACTAAGTAACCCCATATATATTGGCAAAGTAAA
GTGGCGGAATGAACTGAGAGATGGAAAACATGCTCCCATCATAGATATAGAATTATGGGAGAAAACACAGCAAGTAATGG
ATCTAAACAGTTATGTGCAAGAGAAGTTGCATCCTGGAAGCTTCCCCTTATCAGGTTTGTTAAAATGTCCAGAATGTGGT
TCAGCCATGGTACAAGGAAATAGCAGTCCAAAATACAAATACTACCAATTCTCCAGAAATAAGAACAGTGGTAGTAAGGC
ATGTTCCTCAAACCTTGTAAAAAAGGATTATGCTGAGCAACATGTATTTGATCAATTATTTTGTGATTTGCAAAAATACA
ATGTTAAAGAGCCATTGATTAAAATGATTCACTCATACGCCATGAGTGAAATTGAGCCATTGGAAACAACTATCAAGACG
TATGAAGTTGAGTTAGAGGAATTAAAAACGAAGAGAAAAGAACTTATAAATTGGAGGCTAAAAGATATTATTTCAGAAGA
GATTTTAAAAGAGGAAATGGAAGATTTACGAGAGGAAGAAAAATTAATAATAACTCGAATTGAAAAATTACAGCACCTCA
TTAAACTCAGAGATAAAACCTTTTTAACCAATATCATTTCAACTTCACTACACGATCTAAAGAACTTTTTCAATATTATC
GAAGATGATGACAAAAAGGAATTACTTCGTTCTCTCATTGAAGAGATTCACGTAAATCCAGGAAAAACTACTAAGGATAG
AACGATCAAAGAAGTGATTTATAAGTTTGATTTAAAATATTTGAAATCAATTGAACTAAGAGAAGGGGAACATCTTTTCT
CTTTTTTGTGTTTCATATTATAA

Upstream 100 bases:

>100_bases
TTATATTTATAAGCGATTAACACAGGCGGGAATAAACCTTATCTGTATAGCTGACAATATTGATACAAGAGATCCAAGAG
CGAAAATTCTTTACCAAATC

Downstream 100 bases:

>100_bases
TTACAAGGAAGGGAGGATTATTATGCACGAAATAAAACGTGTCGCAATTTACTGTAGAGTTTCTACCGAAGAGCAGGCAA
CGGAAGGATACAGCATATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MSLVAELERDMIIFRTNSGMEKRASEGHFNGGVIYGYASKNKKLKIVPEEAKVINYIFEKYAINQWGYRKIASHLNTLGI
TTKKNNLWSITAVKTILSNPIYIGKVKWRNELRDGKHAPIIDIELWEKTQQVMDLNSYVQEKLHPGSFPLSGLLKCPECG
SAMVQGNSSPKYKYYQFSRNKNSGSKACSSNLVKKDYAEQHVFDQLFCDLQKYNVKEPLIKMIHSYAMSEIEPLETTIKT
YEVELEELKTKRKELINWRLKDIISEEILKEEMEDLREEEKLIITRIEKLQHLIKLRDKTFLTNIISTSLHDLKNFFNII
EDDDKKELLRSLIEEIHVNPGKTTKDRTIKEVIYKFDLKYLKSIELREGEHLFSFLCFIL

Sequences:

>Translated_380_residues
MSLVAELERDMIIFRTNSGMEKRASEGHFNGGVIYGYASKNKKLKIVPEEAKVINYIFEKYAINQWGYRKIASHLNTLGI
TTKKNNLWSITAVKTILSNPIYIGKVKWRNELRDGKHAPIIDIELWEKTQQVMDLNSYVQEKLHPGSFPLSGLLKCPECG
SAMVQGNSSPKYKYYQFSRNKNSGSKACSSNLVKKDYAEQHVFDQLFCDLQKYNVKEPLIKMIHSYAMSEIEPLETTIKT
YEVELEELKTKRKELINWRLKDIISEEILKEEMEDLREEEKLIITRIEKLQHLIKLRDKTFLTNIISTSLHDLKNFFNII
EDDDKKELLRSLIEEIHVNPGKTTKDRTIKEVIYKFDLKYLKSIELREGEHLFSFLCFIL
>Mature_379_residues
SLVAELERDMIIFRTNSGMEKRASEGHFNGGVIYGYASKNKKLKIVPEEAKVINYIFEKYAINQWGYRKIASHLNTLGIT
TKKNNLWSITAVKTILSNPIYIGKVKWRNELRDGKHAPIIDIELWEKTQQVMDLNSYVQEKLHPGSFPLSGLLKCPECGS
AMVQGNSSPKYKYYQFSRNKNSGSKACSSNLVKKDYAEQHVFDQLFCDLQKYNVKEPLIKMIHSYAMSEIEPLETTIKTY
EVELEELKTKRKELINWRLKDIISEEILKEEMEDLREEEKLIITRIEKLQHLIKLRDKTFLTNIISTSLHDLKNFFNIIE
DDDKKELLRSLIEEIHVNPGKTTKDRTIKEVIYKFDLKYLKSIELREGEHLFSFLCFIL

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 recombinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011109
- InterPro:   IPR006119 [H]

Pfam domain/function: PF07508 Recombinase; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 44470; Mature: 44339

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVAELERDMIIFRTNSGMEKRASEGHFNGGVIYGYASKNKKLKIVPEEAKVINYIFEK
CCCHHHHCCCEEEEECCCCHHHHCCCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHH
YAINQWGYRKIASHLNTLGITTKKNNLWSITAVKTILSNPIYIGKVKWRNELRDGKHAPI
HHCCCCHHHHHHHHHHHHCCEECCCCCEEHHHHHHHHCCCEEEEEEHHHHHHCCCCCCCE
IDIELWEKTQQVMDLNSYVQEKLHPGSFPLSGLLKCPECGSAMVQGNSSPKYKYYQFSRN
EEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHCCCCCCCCEEEEEECCC
KNSGSKACSSNLVKKDYAEQHVFDQLFCDLQKYNVKEPLIKMIHSYAMSEIEPLETTIKT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YEVELEELKTKRKELINWRLKDIISEEILKEEMEDLREEEKLIITRIEKLQHLIKLRDKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLTNIISTSLHDLKNFFNIIEDDDKKELLRSLIEEIHVNPGKTTKDRTIKEVIYKFDLKY
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LKSIELREGEHLFSFLCFIL
HHHHHHCCHHHHHHHHHHHC
>Mature Secondary Structure 
SLVAELERDMIIFRTNSGMEKRASEGHFNGGVIYGYASKNKKLKIVPEEAKVINYIFEK
CCHHHHCCCEEEEECCCCHHHHCCCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHH
YAINQWGYRKIASHLNTLGITTKKNNLWSITAVKTILSNPIYIGKVKWRNELRDGKHAPI
HHCCCCHHHHHHHHHHHHCCEECCCCCEEHHHHHHHHCCCEEEEEEHHHHHHCCCCCCCE
IDIELWEKTQQVMDLNSYVQEKLHPGSFPLSGLLKCPECGSAMVQGNSSPKYKYYQFSRN
EEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHCCCCCCCCEEEEEECCC
KNSGSKACSSNLVKKDYAEQHVFDQLFCDLQKYNVKEPLIKMIHSYAMSEIEPLETTIKT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YEVELEELKTKRKELINWRLKDIISEEILKEEMEDLREEEKLIITRIEKLQHLIKLRDKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLTNIISTSLHDLKNFFNIIEDDDKKELLRSLIEEIHVNPGKTTKDRTIKEVIYKFDLKY
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LKSIELREGEHLFSFLCFIL
HHHHHHCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]