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The map label for this gene is yvfT [H]

Identifier: 52787979

GI number: 52787979

Start: 4149557

End: 4150261

Strand: Direct

Name: yvfT [H]

Synonym: BLi04303

Alternate gene names: 52787979

Gene position: 4149557-4150261 (Clockwise)

Preceding gene: 52787978

Following gene: 52787980

Centisome position: 98.27

GC content: 47.94

Gene sequence:

>705_bases
ATGCTCATTTCACCATACGGCATCCGCTCCATGAACCGCCGCATGGAACTGGAACAAAAGCTTGATGAAGCAAATCAGCA
TATTAAGGAACTGGTCAAGCGCGAGGAGCGTGTACGAATTGCCCGCGATCTGCACGATACACTTGGCCATACTCTTTCAC
TGCTCACATTAAAAAGCCAGCTTGTCCAGCGCATCATCGCCAGCGCCCCCGAACGGGCGCGAAAAGAAGCAAGAGAAATG
GAAACCACATCAAGAGCAGCCTTAAAACAAGTCCGGGAACTCGTGTCTGATATGAAAACGGCAACTATTGCAGAAGAGCT
CATCCACATCCAGCAAATCCTGCGGGCTGCAGACATCACATTCGAATACATGGGAGGTTCCGATTTTTCAAATATCCCTC
CTGTCACACAAAACATTGTCAGCATGTGTATACGCGAAGCCGCCACAAATATCGTCAAACACAGCCGCGCCACCCATTGC
ACCATTTCCATCTCTCAAACAGATGATAAAATAAGCATTACCATCAAAGACGACGGAATGGGGATGGATCAGCAAAAAAC
ACCATTTGGTAACGGCTTGCGCGGAATGAAGGAAAGACTTGCATTAATCGACGGCGCTCTCGACGTTTCAACCCATGACG
GCACAGTTTTAAGCATCGCCGTTCCAAATGTAAAGAAAGCTGAAGGAAAGGAAGCAATCCAATGA

Upstream 100 bases:

>100_bases
CAGCCTGGTTGTTGTATTGGTCGCCCCTTTTATCTATCATCTGCTGAAAGATCCATCCCTGCTTAATCGGCTCTTTTATT
TTCTGCCCTTTCTTGTGATT

Downstream 100 bases:

>100_bases
TTCGTTTATTTATTGCCGAAGACCAAAGAATGCTGTTAAGCGCGCTGGGATCCTTGCTTGATCTTGAAGAAGACATGGAA
GTGATCGGCCAGGCGACAAA

Product: YvfT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MLISPYGIRSMNRRMELEQKLDEANQHIKELVKREERVRIARDLHDTLGHTLSLLTLKSQLVQRIIASAPERARKEAREM
ETTSRAALKQVRELVSDMKTATIAEELIHIQQILRAADITFEYMGGSDFSNIPPVTQNIVSMCIREAATNIVKHSRATHC
TISISQTDDKISITIKDDGMGMDQQKTPFGNGLRGMKERLALIDGALDVSTHDGTVLSIAVPNVKKAEGKEAIQ

Sequences:

>Translated_234_residues
MLISPYGIRSMNRRMELEQKLDEANQHIKELVKREERVRIARDLHDTLGHTLSLLTLKSQLVQRIIASAPERARKEAREM
ETTSRAALKQVRELVSDMKTATIAEELIHIQQILRAADITFEYMGGSDFSNIPPVTQNIVSMCIREAATNIVKHSRATHC
TISISQTDDKISITIKDDGMGMDQQKTPFGNGLRGMKERLALIDGALDVSTHDGTVLSIAVPNVKKAEGKEAIQ
>Mature_234_residues
MLISPYGIRSMNRRMELEQKLDEANQHIKELVKREERVRIARDLHDTLGHTLSLLTLKSQLVQRIIASAPERARKEAREM
ETTSRAALKQVRELVSDMKTATIAEELIHIQQILRAADITFEYMGGSDFSNIPPVTQNIVSMCIREAATNIVKHSRATHC
TISISQTDDKISITIKDDGMGMDQQKTPFGNGLRGMKERLALIDGALDVSTHDGTVLSIAVPNVKKAEGKEAIQ

Specific function: Member of the two-component regulatory system yvfT/yvfU. Probably activates yvfU by phosphorylation [H]

COG id: COG4585

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1788812, Length=235, Percent_Identity=29.3617021276596, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI87082311, Length=229, Percent_Identity=28.82096069869, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787474, Length=167, Percent_Identity=26.9461077844311, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011712 [H]

Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 26127; Mature: 26127

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLISPYGIRSMNRRMELEQKLDEANQHIKELVKREERVRIARDLHDTLGHTLSLLTLKSQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVQRIIASAPERARKEAREMETTSRAALKQVRELVSDMKTATIAEELIHIQQILRAADIT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE
FEYMGGSDFSNIPPVTQNIVSMCIREAATNIVKHSRATHCTISISQTDDKISITIKDDGM
EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCCC
GMDQQKTPFGNGLRGMKERLALIDGALDVSTHDGTVLSIAVPNVKKAEGKEAIQ
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHCCCCCCC
>Mature Secondary Structure
MLISPYGIRSMNRRMELEQKLDEANQHIKELVKREERVRIARDLHDTLGHTLSLLTLKSQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVQRIIASAPERARKEAREMETTSRAALKQVRELVSDMKTATIAEELIHIQQILRAADIT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE
FEYMGGSDFSNIPPVTQNIVSMCIREAATNIVKHSRATHCTISISQTDDKISITIKDDGM
EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCCC
GMDQQKTPFGNGLRGMKERLALIDGALDVSTHDGTVLSIAVPNVKKAEGKEAIQ
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]