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The map label for this gene is argR1 [H]

Identifier: 52787839

GI number: 52787839

Start: 3989086

End: 3989526

Strand: Direct

Name: argR1 [H]

Synonym: BLi04162

Alternate gene names: 52787839

Gene position: 3989086-3989526 (Clockwise)

Preceding gene: 52787832

Following gene: 52787840

Centisome position: 94.47

GC content: 44.9

Gene sequence:

>441_bases
ATGAACAAACAAAAACGGCAATGGCTCATCAAGCAGACCATTCTCGAACATCCGGTAGAAAATCAGGAACAGCTGGCATC
CCTGCTGGAAAAACGCGGCATCACCGTTTCGCAGTCTACCATTTCCCGCGATATTAAAGAAATGTATCTTGTGAAACAGC
CCGGTGAAAACGGAAAACTTGTCTACACGACAAATGCTTCTTTATCCATCAATCCTTCCAAAATATTAAAAGATAAAATC
TCTGACGTTGTCCTGCATGTGCATCGAACGGACAACTTGATCATTATTAAAACAATGCCCGGCAACGCCCATGCCATCGG
CGTTCTTCTTGATAAGCTCGGAAGCCCGGAAATGCTGGGCTGTATATGCGGGAACGATACATGCCTTGTGATTTCCCAGT
CACCTGAGGCAGCCCAATCATTTTATGACCATTTATGCTGA

Upstream 100 bases:

>100_bases
AGCCTGAAAGATTTGTTTTTTTGTAAAATAGCTTCCATCTGTCAGCGATAAAACCATTCTATAATAATAGATATACGTGT
TTTGCCTGGGAGGCGCTCTT

Downstream 100 bases:

>100_bases
TCCGGCCGTCCGGATCAGCTTTTTTTGCCCTTCAAAAAAATTTTTTTCGAGAAATCCCCGTTAAAAATATACACGTTTTA
TACGTTCTATTCTCCGCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MNKQKRQWLIKQTILEHPVENQEQLASLLEKRGITVSQSTISRDIKEMYLVKQPGENGKLVYTTNASLSINPSKILKDKI
SDVVLHVHRTDNLIIIKTMPGNAHAIGVLLDKLGSPEMLGCICGNDTCLVISQSPEAAQSFYDHLC

Sequences:

>Translated_146_residues
MNKQKRQWLIKQTILEHPVENQEQLASLLEKRGITVSQSTISRDIKEMYLVKQPGENGKLVYTTNASLSINPSKILKDKI
SDVVLHVHRTDNLIIIKTMPGNAHAIGVLLDKLGSPEMLGCICGNDTCLVISQSPEAAQSFYDHLC
>Mature_146_residues
MNKQKRQWLIKQTILEHPVENQEQLASLLEKRGITVSQSTISRDIKEMYLVKQPGENGKLVYTTNASLSINPSKILKDKI
SDVVLHVHRTDNLIIIKTMPGNAHAIGVLLDKLGSPEMLGCICGNDTCLVISQSPEAAQSFYDHLC

Specific function: Regulates the transcription of the arc operon, involved in arginine catabolism [H]

COG id: COG1438

COG function: function code K; Arginine repressor

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArgR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001669
- InterPro:   IPR020899
- InterPro:   IPR020900
- InterPro:   IPR011991
- ProDom:   PD007402 [H]

Pfam domain/function: PF01316 Arg_repressor; PF02863 Arg_repressor_C [H]

EC number: NA

Molecular weight: Translated: 16251; Mature: 16251

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKQKRQWLIKQTILEHPVENQEQLASLLEKRGITVSQSTISRDIKEMYLVKQPGENGKL
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHEEECCCCCCCE
VYTTNASLSINPSKILKDKISDVVLHVHRTDNLIIIKTMPGNAHAIGVLLDKLGSPEMLG
EEEECCEEEECHHHHHHHHHHHHEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCEEE
CICGNDTCLVISQSPEAAQSFYDHLC
EEECCCEEEEEECCCHHHHHHHHHCC
>Mature Secondary Structure
MNKQKRQWLIKQTILEHPVENQEQLASLLEKRGITVSQSTISRDIKEMYLVKQPGENGKL
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHEEECCCCCCCE
VYTTNASLSINPSKILKDKISDVVLHVHRTDNLIIIKTMPGNAHAIGVLLDKLGSPEMLG
EEEECCEEEECHHHHHHHHHHHHEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCEEE
CICGNDTCLVISQSPEAAQSFYDHLC
EEECCCEEEEEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA